prot_Ecto-sp13_S_contig711.18202.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig711.18202.1
Unique Nameprot_Ecto-sp13_S_contig711.18202.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length703
Homology
BLAST of mRNA_Ecto-sp13_S_contig711.18202.1 vs. uniprot
Match: D7FPK3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK3_ECTSI)

HSP 1 Score: 1162 bits (3007), Expect = 0.000e+0
Identity = 656/702 (93.45%), Postives = 665/702 (94.73%), Query Frame = 0
Query:    1 MSRTMAGENMIKALETRFTKVRSTSADLDRVGAFYGRIIELCVGNPPKDNRHLRALEEQVFLSKQQTTDLSGKVQKLLFEKDAIERLGIDGLRVQLARTKAVRQKVNARAEQLREQIEKNVKSERRGLKAREVATHLDGSSTLPRGTTVLDRDHPSMHGVGVTALVAAGKADGAARRAQTQFRLFAEEELEREGREEALEQLAMLVGAEHVDDIAEKFKXXXXXXXXXXXXXXXXTVTVEKLRKKIERSQKTLSDLQVVDRDTSAGGSSTPCASSGNSNLHREQRRLDDLVFQSGIRLAQSTRKALKAKGEFTDLRVGVIHLASLIDSVVRQADDHGGELILAKSRVQQLLAKELSNAAAATDVPPAVGGEAAPTCSTAAESSGPGGAAGSGAVVVAPAPAEGGVSSRGVPSRDMEDPLEGDHDVDHPDGSGLVEIIPVEKDEDVCKLLEACERRVCRVMEACGLGGSVGTKASVSDSDHNNDPQRHSFWHSGINTATVPPGSEPVTEGEATSSVLDRLFMGQTKGLKGDGAGMDIRVLPPKARDIRFERSMGDALRQQNEKLEMQETEANNLDRNAVATGVASFLEDALNSKSANKHLRRANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGLADATRRRANGMEKTSTADRAILSRTDLSSAVRGRPDLKASSQATSARRKHEGRKKALIKKRVAQTARA 702
            MSRTMAGENMIKALETRFTKVRSTSA+LDRVGAFYGRIIELCVGNPPKDNRHLRALEEQVFLSKQQTTDLSGKVQKLLFEKD IERLGIDGLRVQLARTKAVRQKVN RAEQLREQIEKNVKSERRGLKARE A HLDGSSTLPRGTTVLDRDHPSMHGVGVTALVA GK  GAARRAQTQ RLF EEELEREG EEALEQLAM+VGAEHVDDIAEKFKXXXXXXXXXXXXXXX TVTVEKLRKK+ER QKTLSDLQVVDRD SAGGSSTPCASSGNSNLHREQRRLDDLVFQSGIRLAQSTRKALKAKG+FTDLRVGV+HLASLIDSVVRQADDHGG LILAKSRVQQLLAKELSNAAAATDVP AVGG AAPT STAAESSGPGGAA     V APA AEGGVSSR VP RDMEDPLEG+HDVDHPDGSGLVE IPVEKDEDVCKLLEACERRVCRVMEA GLGGSVGTK SVSDSD N DPQR SFWHSGINTATVPPGSEPVTEGEAT SVLDRLFMGQTKGLKGDGAGMDIRV PPKARD RFERSMGDALRQQNEKLEMQETEA+NLDRNAVATGVASFLEDALNSKSANKHLRRANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGLADATRRRANGMEK STAD+AILSRTDLSSAVRGRPDLKASSQATSARRK EGRKKAL+KKRVAQTARA
Sbjct: 1477 MSRTMAGENMIKALETRFTKVRSTSAELDRVGAFYGRIIELCVGNPPKDNRHLRALEEQVFLSKQQTTDLSGKVQKLLFEKDDIERLGIDGLRVQLARTKAVRQKVNVRAEQLREQIEKNVKSERRGLKAREAAMHLDGSSTLPRGTTVLDRDHPSMHGVGVTALVATGKVYGAARRAQTQSRLFGEEELEREGMEEALEQLAMVVGAEHVDDIAEKFKXXXXXXXXXXXXXXXCTVTVEKLRKKLERRQKTLSDLQVVDRDASAGGSSTPCASSGNSNLHREQRRLDDLVFQSGIRLAQSTRKALKAKGDFTDLRVGVLHLASLIDSVVRQADDHGGALILAKSRVQQLLAKELSNAAAATDVPSAVGGVAAPTPSTAAESSGPGGAAXXXXGVAAPALAEGGVSSRVVPLRDMEDPLEGEHDVDHPDGSGLVETIPVEKDEDVCKLLEACERRVCRVMEASGLGGSVGTKESVSDSDKNVDPQRPSFWHSGINTATVPPGSEPVTEGEATPSVLDRLFMGQTKGLKGDGAGMDIRVFPPKARDTRFERSMGDALRQQNEKLEMQETEASNLDRNAVATGVASFLEDALNSKSANKHLRRANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGLADATRRRANGMEKASTADQAILSRTDLSSAVRGRPDLKASSQATSARRKQEGRKKALMKKRVAQTARA 2178          
BLAST of mRNA_Ecto-sp13_S_contig711.18202.1 vs. uniprot
Match: A0A6H5KY30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY30_9PHAE)

HSP 1 Score: 516 bits (1328), Expect = 2.900e-177
Identity = 271/288 (94.10%), Postives = 276/288 (95.83%), Query Frame = 0
Query:  415 MEDPLEGDHDVDHPDGSGLVEIIPVEKDEDVCKLLEACERRVCRVMEACGLGGSVGTKASVSDSDHNNDPQRHSFWHSGINTATVPPGSEPVTEGEATSSVLDRLFMGQTKGLKGDGAGMDIRVLPPKARDIRFERSMGDALRQQNEKLEMQETEANNLDRNAVATGVASFLEDALNSKSANKHLRRANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGLADATRRRANGMEKTSTADRAILSRTDLSSAVRGRPDLKASSQATSARRKHEGRKKALIKKRVAQTARA 702
            MEDPLE +HDVD+PDGSGLVE IPVEKDEDVCKLLEAC+RRVCRVMEACGLGGSVGTK SVSDSD+N DPQRHSFWHSGINTATVPPGSEP TEGEAT SVLDRLF GQTKGLKGDGAGMDIRV PPKARD RFERSMGDALRQQNEKLEMQETEANNLDRNAVATGVASFLEDALNSKSANKHLRRANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGLADATRRRANGMEK STADRAILSR DLSSAVRGRPDLKASSQATSARRK EGRKKAL+KKRVAQTARA
Sbjct:    1 MEDPLEVEHDVDYPDGSGLVETIPVEKDEDVCKLLEACKRRVCRVMEACGLGGSVGTKESVSDSDNNVDPQRHSFWHSGINTATVPPGSEPATEGEATPSVLDRLFTGQTKGLKGDGAGMDIRVFPPKARDTRFERSMGDALRQQNEKLEMQETEANNLDRNAVATGVASFLEDALNSKSANKHLRRANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGLADATRRRANGMEKVSTADRAILSRADLSSAVRGRPDLKASSQATSARRKQEGRKKALMKKRVAQTARA 288          
BLAST of mRNA_Ecto-sp13_S_contig711.18202.1 vs. uniprot
Match: A0A836CJN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.560e-16
Identity = 171/703 (24.32%), Postives = 248/703 (35.28%), Query Frame = 0
Query:    1 MSRTMAGENMIKALETRFTKVRSTSADLDRVGAFYGRIIELCVGNPPKDNRHLRALEEQ---------------------------------------------------VFLSKQQTTDLSGKVQKLLFEKDAIERLGIDGLRVQLARTKAVRQKVNARAEQLREQIEKNVKSERRGLKAREVATHLDGSSTLPRGTTVLDRDHPSMHGVGVTALVAAGKADGAARRAQTQFRLFAEEELEREGREEALEQLAMLV--GAEHVDDIAEKFKXXXXXXXXXXXXXXXXTVTVEKLRKKIERSQKTLSDLQVVDRDTSAGGSSTPCASSGNSNLHREQRRLDDLVFQSGIRLAQSTRKALKAKGEFTDLRVGVIHLASLIDSVVRQADDHGGELILAKSRVQQLLAKELSNAAAATDVPPAVGGEAAPTCSTAAESSGPGGAAGSGAVVVAPAPAEGGVSSRGVPSRDMEDPLEGDHDVDHPDGSGLVEIIPVEKDEDVCKLLEACERRVCRVMEACGLGGSVGTKASVSDSDHNNDPQR-----HSFWHSGINTATVPPGSEPVTEGEATSSVLDRLFMGQTKGLKGDGAGMDIRVLPPKARDIRFERSMGDALRQQNEKLEMQETEANNLDRNAVATGVASFLEDALNSKSANKHLRRANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGL---ADATRRRA 642
            ++RT AGE +I+ALE R  +V + +A++D +GAFY RII +C  NPPKD  HL ALEEQ                                                   V L+ QQ  DL  + Q LL E + IER GI  LR  LA T+ VRQ+V A+AE LR Q++   +  +  L A + A   +    L                                                R+G EE   Q + L+  GA     +AE                                 Q T S          A  +S        + +HR +R L + +  + +RL Q  R+  +    F  LR           SVV +         L  S ++ L   +L  AAA                                AV +  AP                                  E+ P           +A  +    ++ +  + G        +D              HS  H  +    +   +  V E + T++                 A    RV+P +  D+ FERS+ D +RQQ+ +LE+ E +A +L   +   G+ SFL  AL +  +  HLRR+NMLV G+QGK AGFG++MDDVL  A ID+  L   A +T R+A
Sbjct: 1379 VARTAAGERVIEALEQRVDRVAAAAAEVDGLGAFYDRIITICASNPPKDEPHLSALEEQGRVRCRQPPRLCALMPYAASDWLRHRTCRSLLDSTIIQTGRYSHRVWWLSHVKLAGQQAQDLVARTQVLLGETEDIERGGIRQLRAHLAHTRDVRQRVRAKAEDLRAQLKFEAQRRKGELLAAQAAAVQEKMERL------------------------------------------------RQGLEEQRAQCSALLQHGA-----LAE---------------------------------QDTSSSXXXXXXXXXADSASA-------AEVHRRERDLGERLQAAQMRLDQGKRRLHRTVSAFQCLR-----------SVVPE--------FLTCSPLRPLCHCQLRRAAAV-------------------------------AVTLHDAP---------------------------------YELFPA----------DAFWQSQSDIIFSTMVKGIQDKAGKHNDGXXXXXXXXXXXXXHSPAHLALLQRRLETHTAAVAESKRTAAGRSDATXXXXXXXXXXAAP---RVVPKRQTDVLFERSIEDLVRQQDGELEIAEAKAQSLGEMSRRRGMESFLAGALTAGESLGHLRRSNMLVSGRQGKYAGFGMIMDDVLRQAGIDLAALEATASSTTRQA 1892          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig711.18202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPK3_ECTSI0.000e+093.45EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KY30_9PHAE2.900e-17794.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJN5_9STRA3.560e-1624.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..259
NoneNo IPR availableCOILSCoilCoilcoord: 211..231
NoneNo IPR availableCOILSCoilCoilcoord: 556..576
NoneNo IPR availableCOILSCoilCoilcoord: 96..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig711contigEcto-sp13_S_contig711:30..7847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig711.18202.1mRNA_Ecto-sp13_S_contig711.18202.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig711 16..7999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig711.18202.1 ID=prot_Ecto-sp13_S_contig711.18202.1|Name=mRNA_Ecto-sp13_S_contig711.18202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=703bp
MSRTMAGENMIKALETRFTKVRSTSADLDRVGAFYGRIIELCVGNPPKDN
RHLRALEEQVFLSKQQTTDLSGKVQKLLFEKDAIERLGIDGLRVQLARTK
AVRQKVNARAEQLREQIEKNVKSERRGLKAREVATHLDGSSTLPRGTTVL
DRDHPSMHGVGVTALVAAGKADGAARRAQTQFRLFAEEELEREGREEALE
QLAMLVGAEHVDDIAEKFKDIEARAQDLQAQGQSCTVTVEKLRKKIERSQ
KTLSDLQVVDRDTSAGGSSTPCASSGNSNLHREQRRLDDLVFQSGIRLAQ
STRKALKAKGEFTDLRVGVIHLASLIDSVVRQADDHGGELILAKSRVQQL
LAKELSNAAAATDVPPAVGGEAAPTCSTAAESSGPGGAAGSGAVVVAPAP
AEGGVSSRGVPSRDMEDPLEGDHDVDHPDGSGLVEIIPVEKDEDVCKLLE
ACERRVCRVMEACGLGGSVGTKASVSDSDHNNDPQRHSFWHSGINTATVP
PGSEPVTEGEATSSVLDRLFMGQTKGLKGDGAGMDIRVLPPKARDIRFER
SMGDALRQQNEKLEMQETEANNLDRNAVATGVASFLEDALNSKSANKHLR
RANMLVMGKQGKRAGFGLVMDDVLSGADIDIYGLADATRRRANGMEKTST
ADRAILSRTDLSSAVRGRPDLKASSQATSARRKHEGRKKALIKKRVAQTA
RA*
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