prot_Ecto-sp13_S_contig71004.18193.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig71004.18193.1
Unique Nameprot_Ecto-sp13_S_contig71004.18193.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length100
Homology
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BLAST of mRNA_Ecto-sp13_S_contig71004.18193.1 vs. uniprot
Match: A0A6H5K329_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K329_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 4.320e-11
Identity = 30/40 (75.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 CPASFLFHAYHGVFAQTALQTAVCCSRQSFVLVQSGTGGG 40
            CPAS LFHAYHGVF QTA    VCCSRQS VL  SGTG G
Sbjct:   27 CPASCLFHAYHGVFEQTAXXXXVCCSRQSSVLALSGTGRG 66
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BLAST of mRNA_Ecto-sp13_S_contig71004.18193.1 vs. uniprot
Match: A0A6H5JDD8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD8_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 2.210e-5
Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 0 
Query:   36 GTGGGDATVVERWDGRAVQFFRHAYGAARILGVPLQS 72
            G GGGDATVVERWDGRAVQF          LGVPL++
Sbjct:   29 GQGGGDATVVERWDGRAVQFLGTHTVLQGFLGVPLRA 65
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BLAST of mRNA_Ecto-sp13_S_contig71004.18193.1 vs. uniprot
Match: A0A6H5KS90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS90_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 2.270e-5
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 0 
Query:    1 CPASFLFHAYHGVFAQTALQTA 22
            CPASFLFHAYHGVF QTALQTA
Sbjct:   40 CPASFLFHAYHGVFVQTALQTA 61
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig71004.18193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K329_9PHAE4.320e-1175.00Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDD8_9PHAE2.210e-564.86Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KS90_9PHAE2.270e-595.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig71004contigEcto-sp13_S_contig71004:3..302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig71004.18193.1mRNA_Ecto-sp13_S_contig71004.18193.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig71004 3..488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig71004.18193.1 ID=prot_Ecto-sp13_S_contig71004.18193.1|Name=mRNA_Ecto-sp13_S_contig71004.18193.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
CPASFLFHAYHGVFAQTALQTAVCCSRQSFVLVQSGTGGGDATVVERWDG
RAVQFFRHAYGAARILGVPLQSGSCIPFSCEMCVFFRSSDDSSTFVTTG*
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