prot_Ecto-sp13_S_contig7100.18191.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7100.18191.1
Unique Nameprot_Ecto-sp13_S_contig7100.18191.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: D7FJP9_ECTSI (Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJP9_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 2.000e-124
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0
Query:    1 RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDAAGAGETLRLNGGRNGGVDTESLTQRMESCCT 182
            RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATD AGAGETLRLNGGRNGGVDTESLTQRMESCCT
Sbjct:   42 RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDTESLTQRMESCCT 223          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A835YM14_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM14_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.030e-64
Identity = 109/181 (60.22%), Postives = 134/181 (74.03%), Query Frame = 0
Query:    1 RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDAAGAGETLRLNGGRNGGVDTESLTQRMESCC 181
            RGFN +FTTTIGVDYSDR+L +D R VKLQIWDTAGQERFHSLTTSFFKRAEGF LV+DVS+R+SF++V+ WM DI EQGK  SDVV+ GNKCD++ R VA+ E E+LA    VPY E SAK+N+NV+  F  LAS VK RL+A +AA +A  A ET+ L         T +  ++  +CC
Sbjct:   46 RGFNAKFTTTIGVDYSDRMLTVDARAVKLQIWDTAGQERFHSLTTSFFKRAEGFALVFDVSDRRSFDAVARWMGDIREQGKADSDVVLVGNKCDVKERAVAKGEAEKLAKHFAVPYFEASAKDNVNVDVIFETLASSVKRRLDA-KAADEAKKASETVTLG--------TAAEPKKKSACC 217          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A836CM00_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM00_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.000e-64
Identity = 99/147 (67.35%), Postives = 120/147 (81.63%), Query Frame = 0
Query:    1 RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQA 147
            RGFN +FTTTIGVDYSDR+L +DG+Q+KLQIWDTAGQERFHSLTTSFFKRAEGFVL +DVS+R SFESV+ WMKDI   GK  SDVV+ GNKCD++ R VA+EE + LAA+  VPY E SAKE++NV+  F  +A+ +K RL+A  A
Sbjct:   19 RGFNSKFTTTIGVDYSDRMLTIDGKQIKLQIWDTAGQERFHSLTTSFFKRAEGFVLCFDVSDRASFESVARWMKDIEASGKPDSDVVLVGNKCDMKERAVAKEEAQALAAQFRVPYFEASAKEDVNVDAVFSTVANNIKRRLDAKAA 165          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A6V1KKE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KKE1_HETAK)

HSP 1 Score: 167 bits (423), Expect = 3.340e-49
Identity = 85/163 (52.15%), Postives = 116/163 (71.17%), Query Frame = 0
Query:    1 RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDAAGAGETLRLN 161
            +GF  ++ TTIGVDYSDRL+E+DG + KLQ+WDTAGQERF +LT+SFFKRA+GF L YD+S+R SF++V+ WMKDI EQ   G ++++ GNKCD+    REVA +EG  LA E G P++E SAK + NV++ F  +AS V      +Q +  + GAG    +N
Sbjct:   36 KGFLNKYATTIGVDYSDRLVEVDGDEYKLQVWDTAGQERFRALTSSFFKRADGFCLCYDISSRHSFDNVNRWMKDICEQAPSGFNLILVGNKCDVPEARREVAYQEGVDLAGEFGAPFLEASAKTDRNVDDVFMTVASAV-----VAQKSGGSRGAGTRQNIN 193          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A1K0GV96_9BASI (Uncharacterized protein n=2 Tax=Ustilago bromivora TaxID=307758 RepID=A0A1K0GV96_9BASI)

HSP 1 Score: 160 bits (406), Expect = 1.170e-46
Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    7 FTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDL-QGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDAAGAGETLRLNGGRNGGVDTESLTQRMESCCT 182
            F TTIG+D+  R +ELDG+++KLQIWDTAGQERF ++TT++++ A G +LV+DV++++SFE+V TW  +I +    G    + GNK D  + R V  E+GE+LA ELG+PY+ETSAK N NVEE F NLA  VKTRL  + A T A+ A  +  +N      V++   T     CC+
Sbjct:   38 FITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKTLIGNKSDWKEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQASPAAASANVN------VNSAPKTGGAGGCCS 208          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A7S2AY15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY15_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.270e-46
Identity = 78/141 (55.32%), Postives = 102/141 (72.34%), Query Frame = 0
Query:    3 FNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTR 141
            F+ +F TTIGVDY D++++++G+ VKLQIWDTAGQERF SLT++FF RA+G VL YDVS+R S+E + TWM +I +      DVVICG+KCD+    R+V  EEG+ LA + GVPY E SAK N NVE  F  LA+ +  R
Sbjct:   43 FSHKFVTTIGVDYRDKVVQVNGKSVKLQIWDTAGQERFRSLTSNFFSRADGMVLAYDVSDRTSYEHIKTWMSEIRKHAPEDVDVVICGSKCDIDATDRKVTEEEGQTLAEDEGVPYFEASAKANTNVEAMFMQLATTIVDR 183          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A4S4LJ74_9AGAM (Uncharacterized protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LJ74_9AGAM)

HSP 1 Score: 159 bits (402), Expect = 4.700e-46
Identity = 84/178 (47.19%), Postives = 119/178 (66.85%), Query Frame = 0
Query:    7 FTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAR-EEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDAAGAGETLRLNGGRNGGVDTESLTQRMES-CCT 182
            F TTIG+D+  R +ELDG+++KLQIWDTAGQERF ++TT++++ A G +LVYDV++ +SFE++ TW  ++ +    G D ++ GNK D + + V + EEG Q A ELG+ ++ETSAKEN  VE  F NLA  +KTRL  SQ   DAAGA     + G  +G V     ++R +  CCT
Sbjct:   38 FITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDNKSFENIHTWFSNVEQHASEGVDKILVGNKSDWEDKRVVKTEEGMQKAKELGIEFIETSAKENKEVESAFFNLARAIKTRLIDSQ--PDAAGA-----MGGPADGSVRVNQPSERTQGGCCT 208          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A0F7RZ31_9BASI (Uncharacterized protein n=2 Tax=Sporisorium scitamineum TaxID=49012 RepID=A0A0F7RZ31_9BASI)

HSP 1 Score: 162 bits (409), Expect = 5.670e-46
Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    7 FTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDAAGAGETLRLNGGRNGGVDTESLTQRMESCCT 182
            F TTIG+D+  R +ELDG+++KLQIWDTAGQERF ++TT++++ A G +LV+DV++++SFE+V TW  +I +    G   ++ GNK D +  R V  E+GE+LA ELG+PY+ETSAK N NVEE F NLA  VKTRL  + A   A+ A  T  +N      V++   T     CC+
Sbjct:  132 FITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILIGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTAAVAQASSAAATGNVN------VNSAPKTGAAGGCCS 302          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: A0A1E7F4E5_9STRA (Ras-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4E5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.770e-46
Identity = 84/176 (47.73%), Postives = 116/176 (65.91%), Query Frame = 0
Query:    3 FNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTR----LEASQAATDAAGAGETLRLNGGRNGGVDTESL 173
            F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+QLA E GV + ETSA   +NVE+ F  L++ +K +     EA      A+G G +    G  NGG  T+ +
Sbjct:   47 FSTKFVTTIGVDYRDKMVKIEGVPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDNDRVVTLEEGKQLAEEYGVEFFETSALTGINVEKMFYGLSTTIKRKRIDEFEAGGNGNSASGGGASTAEQGSVNGGGATQPV 222          
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Match: R9P549_PSEHS (Uncharacterized protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9P549_PSEHS)

HSP 1 Score: 161 bits (408), Expect = 8.660e-46
Identity = 84/177 (47.46%), Postives = 119/177 (67.23%), Query Frame = 0
Query:    7 FTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDAAGAGETLRLNGGRNGGVDTESLTQRMESCCT 182
            F TTIG+D+  R +ELDG+++KLQIWDTAGQERF ++TT++++ A G +LV+DV++++SFE+V TW  +I +    G   ++ GNK D +  R V  E+GE+LA ELG+PY+ETSAK N NVEE F NLA  VKTRL  + A T A+ A     +N      V++ + T     CC+
Sbjct:  135 FITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILIGNKSDWEEKRAVTSEQGEELAKELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTAAVTQASPAAAAGNVN------VNSAAKTGPAGGCCS 305          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7100.18191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP9_ECTSI2.000e-12499.45Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YM14_9STRA1.030e-6460.22Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A836CM00_9STRA2.000e-6467.35Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1KKE1_HETAK3.340e-4952.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1K0GV96_9BASI1.170e-4647.46Uncharacterized protein n=2 Tax=Ustilago bromivora... [more]
A0A7S2AY15_9STRA1.270e-4655.32Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4S4LJ74_9AGAM4.700e-4647.19Uncharacterized protein n=1 Tax=Phellinidium pouza... [more]
A0A0F7RZ31_9BASI5.670e-4647.46Uncharacterized protein n=2 Tax=Sporisorium scitam... [more]
A0A1E7F4E5_9STRA5.770e-4647.73Ras-domain-containing protein n=1 Tax=Fragilariops... [more]
R9P549_PSEHS8.660e-4647.46Uncharacterized protein n=1 Tax=Pseudozyma hubeien... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 20..42
score: 54.09
coord: 2..18
score: 29.26
coord: 82..95
score: 38.92
coord: 116..138
score: 40.86
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 2..180
e-value: 0.0041
score: -3.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 3..141
e-value: 8.7E-54
score: 194.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 5..141
e-value: 2.0E-21
score: 87.2
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 5..142
e-value: 4.0E-7
score: -26.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..159
e-value: 7.8E-50
score: 170.8
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 6..140
NoneNo IPR availablePANTHERPTHR24073:SF10coord: 6..140
NoneNo IPR availablePROSITEPS51419RABcoord: 1..181
score: 26.349
IPR001806Small GTPasePFAMPF00071Rascoord: 3..139
e-value: 1.2E-45
score: 155.1
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 8..134
e-value: 7.5E-20
score: 69.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7100contigEcto-sp13_S_contig7100:3..5656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7100.18191.1mRNA_Ecto-sp13_S_contig7100.18191.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7100 3..5656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7100.18191.1 ID=prot_Ecto-sp13_S_contig7100.18191.1|Name=mRNA_Ecto-sp13_S_contig7100.18191.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKR
AEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREV
AREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATD
AAGAGETLRLNGGRNGGVDTESLTQRMESCCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase