mRNA_Ecto-sp13_S_contig7099.18187.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7099.18187.1
Unique NamemRNA_Ecto-sp13_S_contig7099.18187.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: D8LKU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU7_ECTSI)

HSP 1 Score: 576 bits (1484), Expect = 2.660e-202
Identity = 276/302 (91.39%), Postives = 283/302 (93.71%), Query Frame = 1
Query:    1 TISDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLWSYSGGARDENTLLYSRAPSRTRKNAGRGVEYRDGGVKNDT 906
            T  DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARI AH+DDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYRHM MS+PALRP KSKRASDESVKTFHGHKVLQTLIRCYFSP HTTGQRFVMSGSADGSVCIWDILTGNMV+SLSWH GNTRDVSWHPHLPL+ASFSWDAAVGLWSYSGGARDENT          RK+AGRGVE R+ GV+NDT
Sbjct:  328 TRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARISAHDDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYRHMTMSLPALRPIKSKRASDESVKTFHGHKVLQTLIRCYFSPTHTTGQRFVMSGSADGSVCIWDILTGNMVDSLSWHTGNTRDVSWHPHLPLIASFSWDAAVGLWSYSGGARDENT----------RKSAGRGVEDRNRGVENDT 619          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: A0A6H5K2A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A5_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 7.350e-148
Identity = 213/250 (85.20%), Postives = 218/250 (87.20%), Query Frame = 1
Query:    1 TISDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAH----------------------IPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMV 684
            T  DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSD HVYLYSLERKERV+RIRAH++DVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKA H                      +  WDYRHMPMS  ALRPKK KR SDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWD+LTGNMV
Sbjct:  392 TRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDKHVYLYSLERKERVSRIRAHDNDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKATHTSLWCPSYFVGITCLCVCVVVYVHCWDYRHMPMSFTALRPKKGKRTSDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDVLTGNMV 641          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: C3XUD8_BRAFL (Uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XUD8_BRAFL)

HSP 1 Score: 271 bits (693), Expect = 4.100e-86
Identity = 134/265 (50.57%), Postives = 172/265 (64.91%), Query Frame = 1
Query:   10 DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLR-----SPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKD-DKMKKAAHIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLW 786
            DYE H ALD  P     FC+F++ FS  N  +LGG +D  +Y+Y  ER ER  RI +HEDDVNAVA+AD  SQ++ SGGDD + ++WD R     SP+A VG L GH  GIT I +K D RH ISNSKDQT+KLWD+R+   P+  +  ++A    +WDYR  P  +P      ++ A D S+ T+ GH VL TL+RC FSP HTTGQRF+ SG + GSV ++D+LTG +VE L  H    RDVSWHP+ P + S  WD  VGLW
Sbjct:   91 DYETHIALDLNPSER-RFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENSPNA-VGTLAGHSDGITFIDSKADARHLISNSKDQTIKLWDIRKFSPPEGLEASRRAVANQNWDYRWQP--VPKRGRYNARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGQIVEKLRGHKACVRDVSWHPYEPKIMSTGWDGIVGLW 351          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: A0A835ZBR0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR0_9STRA)

HSP 1 Score: 280 bits (717), Expect = 4.250e-84
Identity = 160/375 (42.67%), Postives = 204/375 (54.40%), Query Frame = 1
Query:   10 DYELHQALDFQ-PKPGD-SFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA-VGGLCGHQ--------------------------------AGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPHWDYR-HMPMSIPALRP------------KKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVES----------------------------------------LSW--------HHGNTRDVSWHPHLPLVASFSWDAAVGLWSYSGGARDENTLLYSRAPSR 846
            DYE+H+ALDFQ P+ G  SFCLF+I+FSP+NTH+L GGSD+ V+LY+LERKE VAR++AH DDVNAV + D G  V+LSG DDC I++WD+RS     VG LCGH                                 AGITC++A+ DGR   SNSKDQT+KLWD R M  P     +       WDYR  +P ++ A+              +   +  D+S+KTF GH+VLQTLIRC FSP HTTGQR+++SGS  G V +WD+LTG  ++                                          +W        HH   RDVSWHPHLPL+AS SWD +VGLW+Y  GA   N +  +  PSR
Sbjct:  345 DYEMHEALDFQSPERGAYSFCLFSIRFSPTNTHLLAGGSDHAVHLYNLERKEVVARLKAHADDVNAVCYLDDGGNVLLSGSDDCSIRVWDIRSSKTKPVGTLCGHDGERYVHRRMQQYRAAPDADPLVAAALHSGVAAAGITCVSARADGRTVASNSKDQTLKLWDARAMAGPGSAVARLPTRQSSWDYRWDIPAAMRAVSAXXXXXXXXXXGGRSCTQGVDQSLKTFSGHRVLQTLIRCNFSPMHTTGQRYIVSGSQCGGVHMWDVLTGRPLQRHPQAHRPNIRRRRYLADADXXXXXXXXXXXXXXXXXXXXXAAWEPPEQAPLHHDAVRDVSWHPHLPLLASSSWDCSVGLWTYKRGAC-ANVICKATLPSR 718          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: A0A6P4ZES3_BRABE (DDB1- and CUL4-associated factor 11-like isoform X1 n=23 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZES3_BRABE)

HSP 1 Score: 271 bits (692), Expect = 3.270e-83
Identity = 132/267 (49.44%), Postives = 174/267 (65.17%), Query Frame = 1
Query:   10 DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLR-----SPDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKD-DKMKKAAHIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLWSY 792
            DYE H ALD  P     FC+F++ FS  N  +LGG +D  +Y+Y  ER ER  RI +HEDDVNAVA+AD  SQ++ SGGDD + ++WD R     +P+A VG L GH  GIT I +K D RH ISNSKDQT+KLWD+R+   P+  +  ++A    +WDYR  P+    +R   ++ A D S+ T+ GH VL TL+RC FSP HTTGQRF+ SG + GSV ++D+LTG +VE L  H    RDVSWHP+ P + S  WD  +GLW +
Sbjct:  277 DYETHIALDLNPSER-RFCIFSLTFSSDNKEVLGGANDGCLYIYDRERNERTLRIESHEDDVNAVAYADDSSQILYSGGDDGLCRVWDRRMLSENNPNA-VGTLAGHSDGITFIDSKSDARHLISNSKDQTIKLWDVRKFSPPEGLEASRRAVANQNWDYRWQPVPK-RVRTSSARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVLTGKIVEKLRGHKACVRDVSWHPYEPKIMSTGWDGVLGLWEW 540          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: UPI0013905153 (DDB1- and CUL4-associated factor 11 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013905153)

HSP 1 Score: 262 bits (670), Expect = 2.490e-80
Identity = 133/268 (49.63%), Postives = 171/268 (63.81%), Query Frame = 1
Query:   10 DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA----VGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKM---KKAAHIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLWSY 792
            DY  H ALD +P+    FC F+I FS  NT IL GG+D  +Y+Y    ++R  RI  HEDD+ +V FAD GSQ+  S GDD + K+WD R+ +      VG L GH  GITCI +KGDGRH I+NSKDQT+KLWD+R+  D  +D +   K+A     WDYR       +L+P+    A D S+ T+ GH VL TLIRCYFSP HTTGQR++ +G + GSV I+DILTG +   L+ H+   RDVSWHP+   + S SWD  VGLW Y
Sbjct:  249 DYNTHVALDLRPEVS-RFCAFSITFSHDNTEILAGGNDACLYIYDRGSEQRTLRIEGHEDDLGSVRFADPGSQIFYSAGDDGLCKVWDRRTLNETNPCPVGVLSGHADGITCIASKGDGRHLITNSKDQTIKLWDIRKFSD--NDGIVATKRAVASQRWDYRWQKAPRKSLKPRTL--AGDVSLMTYRGHSVLNTLIRCYFSPDHTTGQRYIYTGCSTGSVVIYDILTGEVKARLTGHNSCVRDVSWHPYENKIVSSSWDGMVGLWQY 511          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: UPI00077A1D94 (DDB1- and CUL4-associated factor 11-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1D94)

HSP 1 Score: 261 bits (667), Expect = 4.580e-80
Identity = 131/273 (47.99%), Postives = 169/273 (61.90%), Query Frame = 1
Query:   10 DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAV----GGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKD-DKMKKAAHIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLWSYSGGARDE 813
            DYE H AL   P     FC F+I+FS  N  IL G +D+ +Y+Y     ++  RI AHED +N V FAD+ SQ++LS  DD + K+WD R  D +V    G   GH  GIT I  +GDGRH I+NSKDQT+KLWDMR+  D +     K+A     WDYR  P+   +LR  ++K   D S+ T+ GH VL TLIRCYFSP HTTGQR++ SG + GS+ I+D LTG +V  L+ H    RDVSWHP+ P + S SWD  +GLWSY     D+
Sbjct:  242 DYETHSALCLSPMES-RFCAFSIKFSHDNKEILAGANDSCLYVYDRGSDQQTLRILAHEDGINCVKFADTSSQILLSAADDGLCKVWDRRVLDESVHSPVGVFAGHADGITYIDPRGDGRHLITNSKDQTIKLWDMRKFSDSEGVTATKQAVAKQRWDYRWQPVPRKSLR--QAKLPGDSSLMTYRGHSVLHTLIRCYFSPLHTTGQRYIYSGCSTGSIVIYDALTGKVVSRLAGHGSTVRDVSWHPYQPEIVSTSWDGVLGLWSYKRDDHDD 511          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: A0A1S3JK10_LINUN (DDB1- and CUL4-associated factor 11 isoform X2 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JK10_LINUN)

HSP 1 Score: 259 bits (662), Expect = 7.650e-80
Identity = 128/270 (47.41%), Postives = 173/270 (64.07%), Query Frame = 1
Query:   10 DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA----VGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKM---KKAAHIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLWSYSG 798
            ++E+H+AL   P  G SFC F+I FS  N  IL G +D  +Y+Y  E  +R  +I AHEDDVN+VAFAD+ S ++ SGGDD ++K+WD R+   A    VG L GH  GIT I +K D R+ +SNSKDQ++KLWDMR+     DD +   K+A    +WDYR  P  +PA   K      D S+ T+ GH VL +LIR  FSPA+TTGQR++ +G A G V ++D+LTG +V  L  H G  RDVSWHP+   + S SWD ++G W+Y+G
Sbjct:  179 EHEVHEALHLFPDAGHSFCAFSIVFSADNKEILAGSNDGGLYVYDRESNQRCLKITAHEDDVNSVAFADTSSHILFSGGDDGLVKVWDRRTLSEATPVPVGTLAGHSDGITFIDSKNDSRYLLSNSKDQSIKLWDMRKFSS--DDAIRGTKRAVARQNWDYRWPP--VPARVKKVKHVEGDSSLMTYRGHSVLHSLIRARFSPAYTTGQRYIYTGCASGGVVVYDVLTGKVVSRLDGHRGCVRDVSWHPYEHTIISTSWDGSLGKWTYNG 444          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: A0A4Y2SEB9_ARAVE (DDB1-and CUL4-associated factor 11 (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2SEB9_ARAVE)

HSP 1 Score: 253 bits (647), Expect = 1.250e-79
Identity = 131/292 (44.86%), Postives = 178/292 (60.96%), Query Frame = 1
Query:   10 DYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRS----PDAAVGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKD--DKMKKAAHIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLWSYSGGARD----ENTLLYSRAPSRTRK 855
            D ELH+AL   P+    FC+FA++FS     ILGG +D ++Y+Y+ E   R  RI +HEDDVN VAFAD+ SQ++ SGGDD + K+WD R+        VG L GH+ GIT +  KGDGRH I+NSKDQT+KLWDMR M  P    +   KA    +WDYR   +   +L  +K K   D S+ T+ GH VLQTLIRC+FSP  TTGQ ++ +G A G V ++D+LTG +  +L  H G  RDVSWHP+   + S SWD  +  W+++    D    + + +YS      R+
Sbjct:   24 DQELHEALPLYPEER-RFCVFALRFSQDGREILGGANDQYLYVYNREENRRTLRIYSHEDDVNTVAFADNTSQILFSGGDDGICKVWDRRTLCEFSPKPVGILAGHEDGITYVDPKGDGRHLITNSKDQTIKLWDMR-MFSPSSCVEGAYKAVKSHNWDYRWQRVPT-SLNKQKRKLPGDTSLMTYRGHSVLQTLIRCHFSPETTTGQSYIYTGCAQGRVVVYDVLTGKIKATLKGHKGCVRDVSWHPYRNEIMSSSWDGTIVKWTFNKTEIDSDSEDGSTIYSHGDGGLRR 312          
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Match: UPI0015A93C64 (DDB1- and CUL4-associated factor 11-like isoform X1 n=2 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A93C64)

HSP 1 Score: 258 bits (660), Expect = 6.310e-79
Identity = 135/292 (46.23%), Postives = 181/292 (61.99%), Query Frame = 1
Query:    4 ISDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAA----VGGLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAAHIPH-WDYR--HMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPAHTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLVASFSWDAAVGLWSYSGGARDENTLLYSRAPSRTRKN 858
              D E+H+AL   P+    FC+FA++FS     ILGG +D  +Y+Y+ E  +R  +IR+HEDDVN VAFAD+ SQ++ SGGDD + K+WD R+   A    VG L GH+ GIT + +KGDGRH I+NSKDQT+KLWDMR    P   +  + A   H WDYR   +P S   L   K K   D S+ T+ GH VLQTLIRC+FSP  TTGQ ++ +G A G V ++D+LTG +   LS H G  RDVSWHP+   + S SWD  V  W+Y+    D ++   S   ++ R+N
Sbjct:  231 FGDQEVHEALPLFPEER-RFCVFALRFSQDGREILGGANDECLYVYNREENKRTLKIRSHEDDVNTVAFADNTSQILFSGGDDGICKVWDRRTLCEAQPKPVGILVGHEDGITYVDSKGDGRHLITNSKDQTIKLWDMRAFSPPSSIEGSRRAVASHNWDYRWQRVPSS---LNKHKRKLPGDTSLMTYRGHSVLQTLIRCHFSPEATTGQSYIYTGCAQGRVVVYDVLTGKIKSILSGHSGCVRDVSWHPYRNEIMSSSWDGTVFKWTYNKTEIDSDSEELSNVYTQVREN 518          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7099.18187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKU7_ECTSI2.660e-20291.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2A5_9PHAE7.350e-14885.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C3XUD8_BRAFL4.100e-8650.57Uncharacterized protein (Fragment) n=1 Tax=Branchi... [more]
A0A835ZBR0_9STRA4.250e-8442.67WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6P4ZES3_BRABE3.270e-8349.44DDB1- and CUL4-associated factor 11-like isoform X... [more]
UPI00139051532.490e-8049.63DDB1- and CUL4-associated factor 11 n=1 Tax=Nemato... [more]
UPI00077A1D944.580e-8047.99DDB1- and CUL4-associated factor 11-like n=1 Tax=A... [more]
A0A1S3JK10_LINUN7.650e-8047.41DDB1- and CUL4-associated factor 11 isoform X2 n=2... [more]
A0A4Y2SEB9_ARAVE1.250e-7944.86DDB1-and CUL4-associated factor 11 (Fragment) n=1 ... [more]
UPI0015A93C646.310e-7946.23DDB1- and CUL4-associated factor 11-like isoform X... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7099contigEcto-sp13_S_contig7099:309..4999 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score575.9
Seed ortholog evalue1.1e-161
Seed eggNOG ortholog2880.D8LKU7
Preferred nameDCAF11
Model size906
KEGG koko:K10770,ko:K11801
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0007568,GO:0008021,GO:0008134,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010259,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010941,GO:0010942,GO:0012505,GO:0016020,GO:0019219,GO:0019222,GO:0019538,GO:0019867,GO:0019941,GO:0030133,GO:0030163,GO:0030424,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031461,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0036477,GO:0040008,GO:0040014,GO:0040018,GO:0042995,GO:0043005,GO:0043025,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044449,GO:0044456,GO:0044464,GO:0045202,GO:0045892,GO:0045927,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048638,GO:0048639,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051603,GO:0055120,GO:0060255,GO:0065007,GO:0070013,GO:0070382,GO:0071704,GO:0080008,GO:0080090,GO:0080134,GO:0080135,GO:0097458,GO:0097708,GO:0098588,GO:0098793,GO:0098805,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0120025,GO:1901214,GO:1901216,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905802,GO:1905803,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Exons8
EggNOG free text desc.WD repeat-containing protein
EggNOG OGsKOG0266@1,KOG0266@2759
Ec32 ortholog descriptionG-protein beta WD-40 repeat
Ec32 orthologEc-11_005630.1
EC2.1.1.229
Cds size906
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7099.18187.1prot_Ecto-sp13_S_contig7099.18187.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7099 309..4999 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463973.0454774-CDS-Ecto-sp13_S_contig7099:308..4601681463973.0454774-CDS-Ecto-sp13_S_contig7099:308..460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 309..460 +
1681463973.060097-CDS-Ecto-sp13_S_contig7099:1350..14261681463973.060097-CDS-Ecto-sp13_S_contig7099:1350..1426Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 1351..1426 +
1681463973.0731018-CDS-Ecto-sp13_S_contig7099:1966..20321681463973.0731018-CDS-Ecto-sp13_S_contig7099:1966..2032Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 1967..2032 +
1681463973.0841193-CDS-Ecto-sp13_S_contig7099:2885..30551681463973.0841193-CDS-Ecto-sp13_S_contig7099:2885..3055Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 2886..3055 +
1681463973.094974-CDS-Ecto-sp13_S_contig7099:3503..36561681463973.094974-CDS-Ecto-sp13_S_contig7099:3503..3656Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 3504..3656 +
1681463973.106349-CDS-Ecto-sp13_S_contig7099:4117..41811681463973.106349-CDS-Ecto-sp13_S_contig7099:4117..4181Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 4118..4181 +
1681463973.1150873-CDS-Ecto-sp13_S_contig7099:4562..46961681463973.1150873-CDS-Ecto-sp13_S_contig7099:4562..4696Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 4563..4696 +
1681463973.1241121-CDS-Ecto-sp13_S_contig7099:4908..49991681463973.1241121-CDS-Ecto-sp13_S_contig7099:4908..4999Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7099 4909..4999 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7099.18187.1

>prot_Ecto-sp13_S_contig7099.18187.1 ID=prot_Ecto-sp13_S_contig7099.18187.1|Name=mRNA_Ecto-sp13_S_contig7099.18187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
TISDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLE
RKERVARIRAHEDDVNAVAFADSGSQVVLSGGDDCVIKIWDLRSPDAAVG
GLCGHQAGITCITAKGDGRHFISNSKDQTMKLWDMRRMLDPKDDKMKKAA
HIPHWDYRHMPMSIPALRPKKSKRASDESVKTFHGHKVLQTLIRCYFSPA
HTTGQRFVMSGSADGSVCIWDILTGNMVESLSWHHGNTRDVSWHPHLPLV
ASFSWDAAVGLWSYSGGARDENTLLYSRAPSRTRKNAGRGVEYRDGGVKN
DT
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mRNA from alignment at Ecto-sp13_S_contig7099:309..4999+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7099.18187.1 ID=mRNA_Ecto-sp13_S_contig7099.18187.1|Name=mRNA_Ecto-sp13_S_contig7099.18187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4691bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7099:309..4999+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACAATCAGCGACTACGAGCTGCACCAAGCTCTCGACTTCCAGCCGAAGCC CGGTGACTCGTTCTGCCTTTTCGCCATCCAGTTTTCCCCCAGCAACACTC ACATCCTGGGCGGCGGGTCCGACAACCACGTCTACCTCTACAGCCTCGAG AGGTGGGTGAGGTGGCGTTTGGCTCCAAGCATGTCACGACACATGGGGGT TTTGGTTCAAGCTGGGAATACATGCGTCATTAGTTGCAACGCCCCCGTCA GGTGTGCGACTGAAAAACGTTTCTCGTTGTGTTCGTGTCACTTTCCGTAG AGGGCTGGCTGCCCACGGCGGTTGTGTTGGTGGTTTTTGGCGCATCTCTC ACGGTGTATCTTGTGGCATCAGCATCCACTCGATGCAGTTGCGACAACAA CATTGCAAGGGTCAAGCGCGTGACAAGACTTTTTGACCACACACGGATCT ATTTTCGGTTAAACAAGGGCCAAGCGCGTGACTACTTTTTGACCACACAA GAATCTATTTGCGGTCAAACAAGCAAGGATCTAAGCTCGTGATGTGACCT GTTACCAACATGCGTCTGCTGCCGTATGGCGTGTGTTATTTATGACGAGC GAGCGTCGCCTCGTCCCCCAAGTCATGCAAGAGTCGAGCGACCGCCTTCC TCGTCCCGCCGGGGGGGTGGTTGGAAGAGCTTGCGGTGTTGCTTGCATGG AAACACCGCGGCGATAGAGGCGATGGGTGGATGACGTCATCGCTACAACG GAATAACAAAGCGGGGTAGCGGGGGCTAAATTGTTTTTTCTTGAATAAAC ATAGCGCCAAGAAAAAAAAAGCCTTCAATTTTGGAGACGGCGGTTGGAGA TCGTTTTGTCCTAAAGGCTGGCTTTGGCGCGGGTGATGTTTTCCCCTCAA CAGCATAATGAACGCCCAACAGAACCGTAGTGCCTCATCACCATCTCATG CACGTGTGTTGTCAGTTCCGTCAACAATCAAAAGATCACTACTAGCAGCA GCACACAACGAAACGCTCTGTCGATATGTCGATGACTCTCAGGAAAGAGC GAGTGGCGCGCATCAGGGCCCACGAGGACGACGTGAACGCCGTGGCATTT GCGGACTCGGGATCTCAGGTGTGTGTGAGAGAGGGAGAGCCCTACCGCCC GACAGACAGCCGATCAAGACGTACATTCGTGCACTTTTCTCCGTTCGCTA TGCCATTTCTATCTTACATCTGAAGAGCAGCTTCGCCTCACCCTCAAAAG GGGTCACAGATCAATAGAAGCATGGTCGGTTTTTAGCGGCGCTGGAACTG GCGTTTTTTCATTTGTTTGTAGGCGTGTGCGGGGATGTGTGTGGGTTCAT GCCCCCCGCTTTCATCTCAAGAGCGGTGCCGTGACTCTTTTTTCACCTGC TCCAAACCCCCCGGCATGATCCTGAAGATAATGAATCCTCGTGGGCTGTG CCTGACGCGCTTCAATGCTTCACCGAAAATATAATTCGTCGTCGGTTGTG TTTGCTGCTGCTGCTGTTGTTGTTGATGTTGTTGTTGTTGTCGTTGTGTT GTGTTGTCTTCACACCCATGTATGCTCTTTCACGCCTCAATTTTTTGCAA ATGCATACAAGTGCGATTGTCGTGTTCGTGTTCGTCGTCGTTGATGTTGC TACATCAGGTTGTGCTATCCGGCGGCGACGACTGCGTGATCAAGATCTGG GACTTGCGCTCCCCCGATGCGGCCGTGAGATGAAATCGTGACGCAGTTAC GGCACGGCAGAGGAGGGGGCATAGGGGTTCACCGACCGGTTGCCATGTGC CATGTCGAAATATGTCACCGACTACGTACGTGCAGCTACCCGGCCAGTTG GCCCGATCCCCGCTGTGGTTTGGCTTACAAGCTTGAAGGAGTTTTTTTTT TTGCGCAGGAATTTAGACACCCACTACCGCGGCATCCGAAGGGCTCGAAC AGAAGAAGAGAAACGGCACGAGAACAGAACAGACGATGCTTGACACGATG AAAATGACGAGATTTTATGCCGCCGAACGCACGAATGGGGAAACCTCTGC CGAACACCACGCCATCGCTTTAATCAGTGCGTTCTCGCGTAGCTGCCCGA ACAATCAGTATGAACGCAAGCTGAACCAACCCCATTTTGACTCTTGTCGT GAAACACGCGCGACCCGGACATGGACGTCTCCCGCGTGAAAACACGTTCT CTGTCGGTCGCCCGTCATTCCTTTCTGCTCTTGTCAATGACGATCCTTTT ATCCATTTCTTTGCTCCGTCCATTTGCACGAAGCCGTCATGTTGTATCCG CTTCAACATCTCATACATGGACCGCTTTCTTGGCTCTGGAGAGCACCGAA GACGAGGCAGTGAACCTGTGAAGAAGGCAACGTCAACAGCACAGCACCTT TAACACCGGCTAACACCAGCAACAAAAACAGCGGTAACCACGAGAACAAC AGCAGCAGCAACATCAACTGACAACCAGCAACCACCAACAGCACAGCAAC TTTAACACCAGCAGCAACAATTCAGCGATATCGACAGCAAGCTTCACTCA ATCACTTCCGCGCGCGTTGTGCCGTAGGTGGGAGGTCTCTGCGGCCACCA GGCGGGGATTACGTGCATCACAGCCAAGGGCGACGGGCGCCACTTCATCT CCAACAGCAAGGACCAGACCATGAAGCTTTGGGACATGCGTCGGATGCTC GACCCTAAGGACGATAAGATGAAGAAGGCCGCCCATATCCCACACTGGTA CCCGAGTTATTTTGTGGGAATTACTTGCGTGTGTCTGTGTCGTTGTCTGC GTGCACTGCTGGTACGTGCTCGCTTTCTGACGAGCGTTTCGTGTGTGCCA CGTGTGTGCGCGCTTGGGCGTGCTTGAGCAGATACACTGTACTGCTGTCC CCAGCTGTCCTTTGCTTGTGTGGGTGTGTTGCGTGTGGTTCGTGTTCTGT TCGTGGTGCGAATGTTCTGTTTGCTGCCGGTATGTGCTCAAGCTACGAGC ATTCCCGGCACCATCTGCAGCCTTACAAAGAAGGGGTGGCGGGTCTCGTG TCGTACACCCTCAGGTGTGATTTTCACCCGCCCTCCACGGCTCTCGGCCC AACTGGTTCGCCTGTCCCAATATCAGTAGCCCCTCTCTCTATAAATTTCC CGACCCCTTTTGTTTGTTCCATGGGCGGGTCCGTGACCTCGGCAGGGACT ACCGACATATGCCCATGTCCATCCCCGCGCTGAGGCCGAAGAAGAGCAAG AGAGCCTCAGACGAGTCCGTCAAAACATTCCACGGCCACAAGGTGCTGCA GACGCTTATCCGGTGCTACTTCTCGCCCGCGCACACTACGGGACAACGGT AAGCCGCGAGTGGTGGAGTGGTGCACCGTGTCTCTCATTTCTTCTTTTTT TGCCATGACTCTTACTCGCGACTCTACGCACGCGCCTTTCGTTGTTTTGT ACTTGATGTTTACACAGTGTTAAGCATTCCAACTGAGCCACTAGACCACT GTTGCGTGAGCGGAGCTCACGAACGGGGTGGAAATTTCAACCCTGCTTTG TGCTGTGCAATGTACAGGCCATAGCAGCAGCAGCAGCAGTAGCAAGGCAG CAGCAGCGACAACGCTAACCAAGAACTAGCAACGCACGTGTTCGTTGATT CGGCAGCTAGCCCTTATCCTTATCCTCCCTTTGTCTCTTCGGAGTGGTAC TCTTTTTTCAGTACAGTGTGCGGTGTGTGCTCCACCCCAACCTTCCCATC AAATGGCAACGCCACAAGCCACGAGAAACGACGGCTTGGCTCCCTCTTGT CTATATCAGGTTCGTCATGTCCGGGAGCGCGGACGGAAGTGTTTGCATCT GGGATATTCTCACCGGCAACATGGTAAGAGAATAGAAGAGAGAACATTTT TGTAATATCTGCTACTTGAAAGTATTATAGAGATTCGCCGCCGTGTTAAT GTCGAACGGCGTTTTGGGGATGCATGCGAAGGACACCAGACCCGAAAAGG ACGATGTTAGCTGGGATTGTTCGAAGTTCTATCCGTTCCTGTATAGGTCT GTCATGTCATATCTCACACACACAATAGACCGTCTTGAAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACAAT CATGCACGTGGCGCGCAACAGCCGCGGGAACTGTCTTTCACGTACCTCCT CCCTCCCTCTCTCCCCGCGCTCGCCCTCTTCTTTCCTACCACCTCCTCCT CCAGGTGGAAAGCCTTTCTTGGCACCACGGCAACACTCGCGACGTCTCGT GGCACCCTCACCTCCCGCTCGTCGCGTCCTTCTCGTGGGACGCGGCGGTG GGCCTGTGGAGCTACAGCGGCGGCGCCCGAGACGAAAAGTAAGCGGCGGC GGCGGCGGCGGCGGCGGCGGCGACGGCGGCACCGAAACCAGTGGCAACAG CAGCAGCGGTGAAAGCAATGCAGGCGGCTGCTGCGGTTGCCGACGGCTGC GGCGGCGGCAACAGCAGCTACAGCAGCCAAGAAAAACGGCCAATCGGGAG GTAGAGCGGCATGATTTCATGCATCGTGAACCCCCCTCGCATCTACCCAG CACATTATTGTACTCACGTGCCCCCTCTCGCACACGGAAAAACGCGGGGA GGGGGGTAGAATACAGGGATGGAGGGGTGAAGAACGACACG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7099:309..4999+

>mRNA_Ecto-sp13_S_contig7099.18187.1 ID=mRNA_Ecto-sp13_S_contig7099.18187.1|Name=mRNA_Ecto-sp13_S_contig7099.18187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7099:309..4999+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACAATCAGCGACTACGAGCTGCACCAAGCTCTCGACTTCCAGCCGAAGCC
CGGTGACTCGTTCTGCCTTTTCGCCATCCAGTTTTCCCCCAGCAACACTC
ACATCCTGGGCGGCGGGTCCGACAACCACGTCTACCTCTACAGCCTCGAG
AGGAAAGAGCGAGTGGCGCGCATCAGGGCCCACGAGGACGACGTGAACGC
CGTGGCATTTGCGGACTCGGGATCTCAGGTTGTGCTATCCGGCGGCGACG
ACTGCGTGATCAAGATCTGGGACTTGCGCTCCCCCGATGCGGCCGTGGGA
GGTCTCTGCGGCCACCAGGCGGGGATTACGTGCATCACAGCCAAGGGCGA
CGGGCGCCACTTCATCTCCAACAGCAAGGACCAGACCATGAAGCTTTGGG
ACATGCGTCGGATGCTCGACCCTAAGGACGATAAGATGAAGAAGGCCGCC
CATATCCCACACTGGGACTACCGACATATGCCCATGTCCATCCCCGCGCT
GAGGCCGAAGAAGAGCAAGAGAGCCTCAGACGAGTCCGTCAAAACATTCC
ACGGCCACAAGGTGCTGCAGACGCTTATCCGGTGCTACTTCTCGCCCGCG
CACACTACGGGACAACGGTTCGTCATGTCCGGGAGCGCGGACGGAAGTGT
TTGCATCTGGGATATTCTCACCGGCAACATGGTGGAAAGCCTTTCTTGGC
ACCACGGCAACACTCGCGACGTCTCGTGGCACCCTCACCTCCCGCTCGTC
GCGTCCTTCTCGTGGGACGCGGCGGTGGGCCTGTGGAGCTACAGCGGCGG
CGCCCGAGACGAAAACACATTATTGTACTCACGTGCCCCCTCTCGCACAC
GGAAAAACGCGGGGAGGGGGGTAGAATACAGGGATGGAGGGGTGAAGAAC
GACACG
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