prot_Ecto-sp13_S_contig70987.18186.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70987.18186.1
Unique Nameprot_Ecto-sp13_S_contig70987.18186.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp13_S_contig70987.18186.1 vs. uniprot
Match: D7G8B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B1_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 9.370e-32
Identity = 69/91 (75.82%), Postives = 70/91 (76.92%), Query Frame = 0
Query:    1 GGFIAIPLRFDVPGQALPARAVLQARLT----------------EGGGSGSEAIVNFGQCFVGQSVTRRVLLRNTSLLPAKFGFIGNPAEV 75
            GG IAIPLRFDVPGQALPARAVLQARLT                EGG  GSEA+VNFG CFVGQSVTRRV LRNTSLLPAKFGFIGNPAEV
Sbjct: 1008 GGIIAIPLRFDVPGQALPARAVLQARLTGSKVEVGCGDGERGEGEGGVGGSEAVVNFGPCFVGQSVTRRVSLRNTSLLPAKFGFIGNPAEV 1098          
BLAST of mRNA_Ecto-sp13_S_contig70987.18186.1 vs. uniprot
Match: A0A6H5JIE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE8_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.020e-28
Identity = 67/91 (73.63%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 GGFIAIPLRFDVPGQALPARAVLQARLTEGG---GSG-------------SEAIVNFGQCFVGQSVTRRVLLRNTSLLPAKFGFIGNPAEV 75
            GG IAIPLRFDVPGQALPARAVLQARLT      G G             SEA+VNFGQCFVGQSVTRRV LRNTSLL AKFGFIGNPAEV
Sbjct:  964 GGIIAIPLRFDVPGQALPARAVLQARLTGSKVEVGCGDXXXXXXXXXXXXSEAVVNFGQCFVGQSVTRRVSLRNTSLLAAKFGFIGNPAEV 1054          
BLAST of mRNA_Ecto-sp13_S_contig70987.18186.1 vs. uniprot
Match: A0A7S2APH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APH7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.820e-9
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 GFIAIPLRFDVPGQALPARAVLQARLTEGGGSGSEAIVNFGQCFVGQSVTRRVLLRNTSLLPAKFGFIGNPAEV 75
            G IA+P++  VP Q +P    L+A+LT G    ++  +NF  C++ +S  +R++LRN S LP KFGFI  P EV
Sbjct:  238 GVIAVPVQIFVPSQKIPIYFTLRAQLTSGELHLNKTELNFENCYITESKVKRLVLRNESALPQKFGFIQLPPEV 311          
BLAST of mRNA_Ecto-sp13_S_contig70987.18186.1 vs. uniprot
Match: UPI0015AADC0D (cilia- and flagella-associated protein 74 isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AADC0D)

HSP 1 Score: 50.4 bits (119), Expect = 3.100e-5
Identity = 29/71 (40.85%), Postives = 36/71 (50.70%), Query Frame = 0
Query:    2 GFIAIPLRFDVPGQALPARAVLQARLTEGGGSGSEAIVNFGQCFVGQSVTRRVLLRNTSLLPAKFGFIGNP 72
            G + +P+   V  Q  P    + A LT          V+FG C V +SV   VLLRN SLLP  FGF+G P
Sbjct:  949 GVLEVPMSVQVADQVRPVAFTVNAILTTSELEFDRTEVDFGHCSVFESVKTSVLLRNRSLLPQDFGFLGIP 1019          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70987.18186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G8B1_ECTSI9.370e-3275.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIE8_9PHAE3.020e-2873.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2APH7_9STRA1.820e-943.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI0015AADC0D3.100e-540.85cilia- and flagella-associated protein 74 isoform ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 33..82
e-value: 3.0E-6
score: 29.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70987contigEcto-sp13_S_contig70987:375..674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70987.18186.1mRNA_Ecto-sp13_S_contig70987.18186.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70987 375..674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70987.18186.1 ID=prot_Ecto-sp13_S_contig70987.18186.1|Name=mRNA_Ecto-sp13_S_contig70987.18186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
GGFIAIPLRFDVPGQALPARAVLQARLTEGGGSGSEAIVNFGQCFVGQSV
TRRVLLRNTSLLPAKFGFIGNPAEVIKESKEFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold