prot_Ecto-sp13_S_contig70968.18185.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70968.18185.1
Unique Nameprot_Ecto-sp13_S_contig70968.18185.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length54
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 5.810e-29
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH TTSHSDEE
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEE 153
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5K055_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K055_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 7.010e-29
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATT SDI+CHSCYEPGHIRRNCPKIKNRAK+KT+PAGATKWCSKH TTSHSDEE
Sbjct:    1 MATTTSDIMCHSCYEPGHIRRNCPKIKNRAKQKTRPAGATKWCSKHYTTSHSDEE 55
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5K783_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K783_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.040e-28
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWC KH TTSHSDEE
Sbjct:  108 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCFKHNTTSHSDEE 162
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.370e-28
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH TTSHSDEE
Sbjct:  236 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEE 290
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5LLS9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS9_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.150e-28
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAG TKWCSKH TTSHSDEE
Sbjct:  122 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGGTKWCSKHNTTSHSDEE 176
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5KP59_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP59_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.730e-28
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH TTSHSDEE
Sbjct:   47 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEE 101
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 6.460e-28
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH TTSHSDEE
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEE 153
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 9.020e-28
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWC KH TTSHSDEE
Sbjct:  195 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCCKHNTTSHSDEE 249
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 9.820e-28
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH TTSHSDEE
Sbjct:  254 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEE 308
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.000e-27
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH-TTSHSDEE 54
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKH TTSHSDEE
Sbjct:   29 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEE 83
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70968.18185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZM5_9PHAE5.810e-2998.18CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K055_9PHAE7.010e-2990.91CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K783_9PHAE1.040e-2896.36CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JF66_9PHAE1.370e-2898.18CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5LLS9_9PHAE2.150e-2896.36CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KP59_9PHAE2.730e-2898.18CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZ53_9PHAE6.460e-2898.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXR7_9PHAE9.020e-2896.36CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L580_9PHAE9.820e-2898.18CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KMG5_9PHAE1.000e-2798.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 9..25
e-value: 1.3E-4
score: 21.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 10..25
score: 9.373
NoneNo IPR availableGENE3D4.10.60.10coord: 3..50
e-value: 1.1E-6
score: 30.8
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 5..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70968contigEcto-sp13_S_contig70968:347..508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70968.18185.1mRNA_Ecto-sp13_S_contig70968.18185.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70968 347..508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70968.18185.1 ID=prot_Ecto-sp13_S_contig70968.18185.1|Name=mRNA_Ecto-sp13_S_contig70968.18185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp
MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHTTSH
SDEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf