prot_Ecto-sp13_S_contig7092.18178.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7092.18178.1
Unique Nameprot_Ecto-sp13_S_contig7092.18178.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length314
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7092.18178.1 vs. uniprot
Match: A0A6H5KVI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI4_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 1.260e-146
Identity = 268/296 (90.54%), Postives = 272/296 (91.89%), Query Frame = 0 
Query:    1 MASAAGGNVGWEDEGGRGPSPSRERVVDXXXXXXXXXXXXXXXXX---GGAEEFEGARSAGGAEVDDLMERFQRGGGELDLSQLGGGSSNGDYERRVSVSIAGAAEDIVAGWQAEDXXXXXXXXXXXXXXXXXXGGKAKGLGDLLWGHEAYESDGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGATPKKTGGDRPWGAASGPKTIADVVAXXXXXXXXXXXEMPSSEEGDREGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLK 293
            MA+AAGGNVGWEDEGGRGPSPSR  V DXXXXXXXXXXXXX       G AEEFEGA SA GAEVDDLMERFQRGGGELDLSQLGGGSSNGDYER++SVSIAGAAEDI AGWQAED  XXXXXXXXXXXXX    GKAKGLGDLLWGHEAYESDGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGAT KKTGGDRPWGAASGPKTIADVVAXXXXXXXXX  EMPSS+EGD EGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLK
Sbjct:  205 MATAAGGNVGWEDEGGRGPSPSRRIVADXXXXXXXXXXXXXELFDNVTGSAEEFEGAGSASGAEVDDLMERFQRGGGELDLSQLGGGSSNGDYERQISVSIAGAAEDIAAGWQAEDDEXXXXXXXXXXXXXES--GKAKGLGDLLWGHEAYESDGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGATAKKTGGDRPWGAASGPKTIADVVAXXXXXXXXXGGEMPSSDEGDGEGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLK 498
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BLAST of mRNA_Ecto-sp13_S_contig7092.18178.1 vs. uniprot
Match: D8LHT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT1_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 1.480e-133
Identity = 230/248 (92.74%), Postives = 236/248 (95.16%), Query Frame = 0 
Query:   66 MERFQRGGGELDLSQLGGGSSNGDYERRVSVSIAGAAEDIVAGWQAEDXXXXXXXXXXXXXXXXXXGGKAKGLGDLLWGHEAYESDGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGATPKKTGGDRPWGAASGPKTIADVVAXXXXXXXXXXXEMPSSEEGDREGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLKDNPLDVSDWRFSGQASSYGM 313
            MERFQRGGGELDLSQLGGGSSNGDYERR+SVSIAGAAEDIVAGW+AEDXXXXXXXXXXXXXXXX  GGKAKGLGDLLWGHEAYESDGFDSSLEDQVEAMY+CLKAHLTVSLEENRGGADAAAFGA  KKTGGDRPWGAASGP+TIADVV XXXXXXXXXXXE+P S+EGD EGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLKDNPLD S WRFS  ASS GM
Sbjct:    1 MERFQRGGGELDLSQLGGGSSNGDYERRLSVSIAGAAEDIVAGWEAEDXXXXXXXXXXXXXXXX--GGKAKGLGDLLWGHEAYESDGFDSSLEDQVEAMYECLKAHLTVSLEENRGGADAAAFGAAAKKTGGDRPWGAASGPQTIADVVXXXXXXXXXXXXEVPPSDEGDGEGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLKDNPLDASVWRFSCLASSSGM 246
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7092.18178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVI4_9PHAE1.260e-14690.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT1_ECTSI1.480e-13392.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7092contigEcto-sp13_S_contig7092:2401..5135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7092.18178.1mRNA_Ecto-sp13_S_contig7092.18178.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7092 2401..5135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7092.18178.1 ID=prot_Ecto-sp13_S_contig7092.18178.1|Name=mRNA_Ecto-sp13_S_contig7092.18178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=314bp
MASAAGGNVGWEDEGGRGPSPSRERVVDDDDDDDDDELFDDDDVTGGAEE
FEGARSAGGAEVDDLMERFQRGGGELDLSQLGGGSSNGDYERRVSVSIAG
AAEDIVAGWQAEDDEEEEEEGEEEDDDEDEEGGKAKGLGDLLWGHEAYES
DGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGATPKKTGGDRP
WGAASGPKTIADVVAAAAAAAGSSGGEMPSSEEGDREGQYLWGCTSPQEE
REQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLKDNPLDVS
DWRFSGQASSYGM*
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