mRNA_Ecto-sp13_S_contig7092.18177.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: D8LHT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT2_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.320e-109 Identity = 163/207 (78.74%), Postives = 170/207 (82.13%), Query Frame = 1
Query: 13 QGDPDDLPPCPSGVSDLAKPIQVRLLPRHSSCPXXXXXXXXXXXXXXXXXXXXXXXPAPGGSLPAGWYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVGAELGLERAAAAGLFALVLAVTPANIYMFSHGAQLPEGLEVPVFGHAVRGFFQCVLLAFFWTLANS 633
QGDPDDLPPCPSGVSDLAKP Q ++ + +LPAGWY+IWQFTWAPLLGLTFSAAGIAHFTLL+EFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVGAELGLERAAAAGLFALVLAVTPANIYMFSHGAQLPEGLEVPVFGHAVRGFFQCVLLAFFWTLA+S
Sbjct: 59 QGDPDDLPPCPSGVSDLAKPTQALIV------------AGVFAGLGAGTIAVLAGLQSLEAALPAGWYAIWQFTWAPLLGLTFSAAGIAHFTLLREFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVGAELGLERAAAAGLFALVLAVTPANIYMFSHGAQLPEGLEVPVFGHAVRGFFQCVLLAFFWTLASS 253
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A7S4LM97_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LM97_9EUGL) HSP 1 Score: 160 bits (405), Expect = 9.850e-45 Identity = 83/144 (57.64%), Postives = 103/144 (71.53%), Query Frame = 1
Query: 199 LPAGWYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWG-FWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVGAELGLERAAAAGLFALVLAVTPANIYMFSHGAQLPEGLEVPVFGHAVRGFFQCVLLAFFWTLA 627
LP+GWY W T+ PLLG F+ AG AHF LL+EF NIYP GAWG W LPG+++FHV+WTG+ EL GG+GL G+ + + + R +A LF LV+AVTPANIYMF+HGAQLP G EVP+ HAVR Q VLL+F W +A
Sbjct: 164 LPSGWYERWSSTF-PLLGGVFALAGAAHFLLLEEFSNIYPPPGAWGGLWQLPGSAAFHVEWTGVVELLGGLGLLGAGM-IRKDRDVARLSAFVLFCLVIAVTPANIYMFTHGAQLPPGQEVPLNFHAVRAVMQMVLLSFLWEIA 305
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A812X3J2_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812X3J2_SYMPI) HSP 1 Score: 155 bits (392), Expect = 2.380e-43 Identity = 84/157 (53.50%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 193 GSLPAGWYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVG-----------AELGLERAAAAGLFALVLAVTPANIYMFSHGAQL----PEGLEVPVFGHAVRGFFQCVLLAFFW 618
G LP GW+ WQ TW P+LG + AAGIAHFT + F IYP +G WGFWYLPG++ FHV WTG+AE+AGG GL LG L +G A L +A GLFAL AVTPANIYM++HGAQ+ P VPV HAVRG Q +LL W
Sbjct: 102 GILPEGWFKTWQKTW-PILGAFYMAAGIAHFTAAEAFEAIYPPQGTWGFWYLPGSAEFHVAWTGVAEIAGGSGLFLGSLLLGLAGAFNWELPAALRSLPALSALGLFALTWAVTPANIYMYTHGAQMIGLTPGDQPVPVEFHAVRGLLQVLLLGILW 257
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A7S2ETR2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ETR2_TRICV) HSP 1 Score: 155 bits (393), Expect = 4.180e-43 Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 211 WYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGG--------------LGVGAELGLERAAAAGLFALVLAVTPANIYMFSHGAQLP-EGLEVPVFGHAVRGFFQCVLLAFFWTLANS 633
W W+++W PLLG ++A G+ HFTL +++CNIYP +GAWG WYLPG++ FHV+WTG+AE+ GG+GL +GG L + +G + AAA L A+ +AVTPANIYM++HGA+LP +G EVPV GHA+RG Q VLL + +
Sbjct: 144 WVQTWRYSW-PLLGAIYAALGVTHFTLEEQYCNIYPSQGAWGIWYLPGSAKFHVQWTGVAEILGGLGLLIGGAYDAFAPVYTNIPNLITASGIGSDSAAA--LAAVTVAVTPANIYMYTHGARLPVDGPEVPVVGHAIRGVMQIVLLGLLYQMGQG 296
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A812P8Q8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P8Q8_9DINO) HSP 1 Score: 155 bits (391), Expect = 4.990e-43 Identity = 82/157 (52.23%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 193 GSLPAGWYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVG-----------AELGLERAAAAGLFALVLAVTPANIYMFSHGAQL----PEGLEVPVFGHAVRGFFQCVLLAFFW 618
G+LP GW+ W+ TW P+LG + AAG+AHFT F IYP +G WGFWYLPG+++FHV WTG+AE+AGG GL LG L +G A L +A GLF L AVTPANIYMF+HGAQ+ P +PV HAVRG Q VLL W
Sbjct: 116 GTLPEGWFKTWRKTW-PILGAFYMAAGVAHFTAADAFEAIYPPQGTWGFWYLPGSAAFHVAWTGVAEIAGGSGLFLGSLFLGLAGAFNWELPPALRSLPALSALGLFTLTWAVTPANIYMFTHGAQMTGLTPGDQPIPVEFHAVRGLLQVVLLGILW 271
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A1Q9EAA7_SYMMI (Uncharacterized protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EAA7_SYMMI) HSP 1 Score: 152 bits (383), Expect = 6.050e-42 Identity = 82/157 (52.23%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 193 GSLPAGWYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVGA------EL-----GLERAAAAGLFALVLAVTPANIYMFSHGAQL----PEGLEVPVFGHAVRGFFQCVLLAFFW 618
G LP GW+ W+ TW P+LG + AAG+AHFT F IYP +G WGFWYLPG++ FHV WTG+AE+AGG GL LG L +G EL + +A GLFAL AVTPANIYM++HGAQ+ P +PV HAVRG Q VLL W
Sbjct: 107 GILPEGWFKTWRKTW-PILGAFYMAAGVAHFTAADAFEAIYPPQGTWGFWYLPGSAEFHVAWTGVAEIAGGSGLFLGSLLLGLAGAFNWELPAVLRSIPALSALGLFALTWAVTPANIYMYTHGAQMIGLTPGDQPIPVEFHAVRGLLQVVLLGILW 262
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A7S0FIS0_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FIS0_9DINO) HSP 1 Score: 152 bits (385), Expect = 1.440e-41 Identity = 80/161 (49.69%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 196 SLPAGWYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGG--LGVGAELG---------LERAAAAGLFALVLAVTPANIYMFSHGAQL----PEGLEVPVFGHAVRGFFQCVLLAFFWTLANS 633
+LP GW+ WQ TW P++G + AAG+AHFT + F +IYP G WGFWYLPG++ FHV WTG AE+ GG GL LG LGV LG L AA GLF L L V+PANIYM++HGAQ+ P +PV GH R Q VLL+ W S
Sbjct: 171 ALPEGWFDNWQKTW-PIVGAVYMAAGVAHFTAAEAFLSIYPPAGTWGFWYLPGSAEFHVAWTGAAEIVGGAGLFLGAVALGVADALGRDVPVWFRWLHALAALGLFVLTLVVSPANIYMYTHGAQMVGLTPGDAPIPVEGHYARAALQAVLLSILWAYYES 330
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A7S1ZLV9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLV9_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.630e-41 Identity = 78/155 (50.32%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 211 WYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGL------------GVGAELGLERAAAAGLFALVLAVTPANIYMFSHGAQLP-EGLE-VPVFGHAVRGFFQCVLLAFFWTLANS 633
W W++TW P LG+ ++AAG+ HFTL +++ NIYP +GAWG WY+PG+ SFHV+WTGIAE+ GGVGL +GGL V G+E AAA L L VTPANI+M++HGA+LP EG E VPV GH VRG Q VL + +
Sbjct: 132 WVQTWRYTW-PFLGVIYTAAGVTHFTLQKDYENIYPSKGAWGVWYVPGSPSFHVQWTGIAEILGGVGLIVGGLYDAFMPVFGTMPNVITPAGIESDAAAVLLLLTAVVTPANIFMYTHGAKLPMEGSEEVPVVGHVVRGVMQVVLFGLLYQMGEG 285
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A7S1SPN4_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SPN4_9CHLO) HSP 1 Score: 150 bits (378), Expect = 2.680e-41 Identity = 84/156 (53.85%), Postives = 106/156 (67.95%), Query Frame = 1
Query: 181 PAPGGSLPAGWYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGLGVGA-ELGLERAAAAGLFALVLAVTPANIYMFSHGAQ--LPEGLEVPVF---GHAVRGFFQCVLLAFFWTLAN 630
PA ++P G Y+ + TW PL+GLT+ AAG+AHF + Q F ++YP RGAWG WYLPG+ SFHV+WTG+AE+AGG GL LG L + LE A+A GLFAL AV PANIYMF+H A +PEG E+PV GH RG Q LL+ W +A+
Sbjct: 109 PAVASTVP-GLYAFSESTW-PLIGLTYVAAGVAHFGVEQGFLDMYPHRGAWGIWYLPGSPSFHVRWTGVAEVAGGAGLLLGALHLPLLPEWLESASALGLFALSWAVYPANIYMFTHNAPGPVPEGQELPVINWQGHLARGVLQVFLLSILWGIAH 262
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Match: A0A7S2KNF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KNF7_9STRA) HSP 1 Score: 150 bits (378), Expect = 7.040e-41 Identity = 77/160 (48.12%), Postives = 98/160 (61.25%), Query Frame = 1
Query: 211 WYSIWQFTWAPLLGLTFSAAGIAHFTLLQEFCNIYPGRGAWGFWYLPGTSSFHVKWTGIAELAGGVGLALGGL------------GVGAELGLERAAAAGLFALVLAVTPANIYMFSHGAQLP-------EGLEVPVFGHAVRGFFQCVLLAFFWTLANS 633
W W++TW PLLG ++AAG+ HFTL +E+ NIYP AWGFW LPG+ FHV+WTG+AEL GG+GL +GG V G+ +AA L L L VTPANIYM++HGA+LP G E+PV GHA+RG Q VLLA + +
Sbjct: 131 WIQSWKYTW-PLLGAIYAAAGVTHFTLEEEYVNIYPANKAWGFWSLPGSPQFHVQWTGVAELLGGLGLLIGGAYDAFASVYTQFPNVLTPAGIGSDSAAALMLLTLVVTPANIYMYTHGAKLPMKTPEGEPGPEIPVAGHAIRGVMQVVLLALLYQMGEG 289 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7092.18177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7092.18177.1 >prot_Ecto-sp13_S_contig7092.18177.1 ID=prot_Ecto-sp13_S_contig7092.18177.1|Name=mRNA_Ecto-sp13_S_contig7092.18177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp MPFLQGDPDDLPPCPSGVSDLAKPIQVRLLPRHSSCPPPPPPPPPHTCGGback to top mRNA from alignment at Ecto-sp13_S_contig7092:132..1211+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7092.18177.1 ID=mRNA_Ecto-sp13_S_contig7092.18177.1|Name=mRNA_Ecto-sp13_S_contig7092.18177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1080bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7092:132..1211+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7092:132..1211+ >mRNA_Ecto-sp13_S_contig7092.18177.1 ID=mRNA_Ecto-sp13_S_contig7092.18177.1|Name=mRNA_Ecto-sp13_S_contig7092.18177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7092:132..1211+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |