mRNA_Ecto-sp13_S_contig7090.18176.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: D7G8R8_ECTSI (CNH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R8_ECTSI) HSP 1 Score: 976 bits (2523), Expect = 0.000e+0 Identity = 555/604 (91.89%), Postives = 559/604 (92.55%), Query Frame = 1
Query: 1 QVLAWQAVSLAPRRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMDTTTGALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEERLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCKDMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVPPGGSLQGPNSRKKGPTSSGEPPRQLTGVSRSRAASAVMTFLERHRPAIVAAAEREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTLVLLDTMLISSYVQCSPPRHSALVELLSGPNRCSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRQAVIKKTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXWTAPQFRRWLAAYLRELRLSPEPAHRALVPRSVKPLLEADPALGLSVFLNEHRQAAGLSHHGGVLAQRRVGGSRRAGGASADGRRAEASLAPHDVVSFLKTITPSE 1812
QVLAWQAVSLAPRRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMD TTGALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEERLTWTAPPLSVCLSTAFFVAALPRQ VEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCKDMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVPPGGSLQGPN+ KKGPTSSGEPPRQLTGVSRSRAASAVMTFLERHRPAI+AAAEREDCQKADDA XXXXXXXXXXXXXXXXXXXXX GDTLVLLDTML+SSYVQCSPPRHSALVELLSGPNRCSL ACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDR + XXXXXXXXXX WTAPQFRRWLAAYLRELRLS EPAHRALV RSVKPLLEADPALGLSVFLNEHRQA GLSHHGG LAQRRVG SRRAGGASADGRRAEA LAPHDVVSFLKTITPSE
Sbjct: 138 QVLAWQAVSLAPRRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMDATTGALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEERLTWTAPPLSVCLSTAFFVAALPRQ-VEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCKDMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVPPGGSLQGPNTPKKGPTSSGEPPRQLTGVSRSRAASAVMTFLERHRPAILAAAEREDCQKADDAEDADGPAXXXXXXXXXXXXXXXXXXXXXGKAGDTLVLLDTMLMSSYVQCSPPRHSALVELLSGPNRCSLAACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRCVAPSSSSXXXXXXXXXXX-----------------WTAPQFRRWLAAYLRELRLSSEPAHRALVLRSVKPLLEADPALGLSVFLNEHRQATGLSHHGGFLAQRRVGVSRRAGGASADGRRAEAGLAPHDVVSFLKTITPSE 723
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: A0A6H5LBZ9_9PHAE (CNH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBZ9_9PHAE) HSP 1 Score: 439 bits (1130), Expect = 1.170e-146 Identity = 229/233 (98.28%), Postives = 230/233 (98.71%), Query Frame = 1
Query: 1 QVLAWQAVSLAPRRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMDTTTGALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEERLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCK 699
QVLAWQAVSLAPRRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMD TTGALSPALLLSDRDQLD SASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEERLTWTAPPLSVCLSTAFFVAALPRQ VEVHDLASLAPLQTFDLPGATCMTTCP+GGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCK
Sbjct: 138 QVLAWQAVSLAPRRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMDATTGALSPALLLSDRDQLDTSASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEERLTWTAPPLSVCLSTAFFVAALPRQ-VEVHDLASLAPLQTFDLPGATCMTTCPIGGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCK 369
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: A0A835YS55_9STRA (CNH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS55_9STRA) HSP 1 Score: 330 bits (846), Expect = 7.980e-97 Identity = 251/567 (44.27%), Postives = 325/567 (57.32%), Query Frame = 1
Query: 1 QVLAWQAVSLAPRRDFPLPETPRSMALVP-EDADGPAGSS------GPKLVLALRKEYSVMDTTTGALSPALLLSDRDQLDASASSMTSSISGL-----GGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLV--GRGHEERLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCK-DMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVPPGGSLQGPNSRKKGPTSSGEPPRQLTGVSRSRAASAVMTFLERHRPAIVAAAEREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTLVLLDTMLISSYVQCSPPRHSALVELLSGPNR---CSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRQAVIKKTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXWTAPQFRRWLAAYLRELRLSPEPAHRALVPRSVKPLLEADPALGLSVFLNE 1647
QV +WQ+V + RR+ PL +TPR+M VP D AG S G KLVL+++ EY ++D +GA+SP L QL+ +A++ + S + V+L + AS+ARGARVLLS+ S+G+L+DL G G +ERL+W+ PPL+ L+ AFFVAALP Q VEVHD A+LAP+Q D+ G CM C G RG +Y+ TA +VNLLK+IPI+FQVETL ++GSY++AL LC MC D ++LG V + ++HERYAYDLFSWGDYEGAV HFL A P+ HV+ LFPSL PP+ P GSL P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LL+T+L+S+ + C+PPR A++ LS +R C L A AP+LAA+G F+EALL LYR +GLH +AL L +E+R W Q+RRW+A YL+ L S + H L R+ LL+ADP LGL+VF E
Sbjct: 138 QVFSWQSVGVILRRELPLVDTPRAMTCVPPRDGQATAGDSRHGARPGGKLVLSMKGEYYLIDCDSGAVSPPL------QLNGTAAAASXXXXXXXXXQPAAAPSPAGNVMLTLGASAARGARVLLSTSSKGVLMDLNAGGEGQDERLSWSGPPLAAQLTVAFFVAALPSQ-VEVHDAATLAPVQIIDMSGVVCMAGCSASGPRGGYSYIGTAQTVNLLKMIPIQFQVETLVDAGSYKEALRLCDMCGGDAALLGGVAIPTVHERYAYDLFSWGDYEGAVSHFLQAGAPLPHVVGLFPSLLPPDL--PRGSLL---------------PXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAALLETVLVSARLHCAPPRREAIIAQLSDASRPCHCDLSATAPVLAAAGAPFVEALLWLYRSKGLHREALGLLSEER------------------------------CVGAGGWNKAQYRRWVAQYLQSLWFSDDAEHPPLALRAAPALLQADPRLGLTVFTGE 644
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: A0A6H5L3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y1_9PHAE) HSP 1 Score: 263 bits (673), Expect = 5.740e-75 Identity = 203/276 (73.55%), Postives = 212/276 (76.81%), Query Frame = 1
Query: 985 MTFLERHRPAIVAAAEREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTLVLLDTMLISSYVQCSPPRHSALVELLSGPNRCSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRQAVIKKTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXWTAPQFRRWLAAYLRELRLSPEPAHRALVPRSVKPLLEADPALGLSVFLNEHRQAAGLSHHGGVLAQRRVGGSRRAGGASADGRRAEASLAPHDVVSFLKTITPSE 1812
MTFLERHRPAIVAAAEREDCQKADD XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GDTLVLLDTML+SSYVQCSPPRHSALV P++ ++ R + D D Q I TRC XXXXXXXXXXXX WTAPQFRRWLAAYLRELRLS EPAHRALVPRSVKPLLEADPALGLSVFL+E+RQAAGLSHHGG+LAQRRVGGSRRAGGASADGRRAEASLAPHDVVSFLKTITPSE
Sbjct: 1 MTFLERHRPAIVAAAEREDCQKADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGDTLVLLDTMLMSSYVQCSPPRHSALVR------------------GRAPTYETEIVMKVRLQRAETDG------DEQRSI--TRCVAPSSSSXXXXXXXXXXXX--------WTAPQFRRWLAAYLRELRLSSEPAHRALVPRSVKPLLEADPALGLSVFLDENRQAAGLSHHGGLLAQRRVGGSRRAGGASADGRRAEASLAPHDVVSFLKTITPSE 242
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: F0YJL4_AURAN (CNH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJL4_AURAN) HSP 1 Score: 167 bits (423), Expect = 6.460e-40 Identity = 191/638 (29.94%), Postives = 262/638 (41.07%), Query Frame = 1
Query: 1 QVLAWQAVSLAP--RRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKE--YSVMDTTT-----GALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDL-------------VGRGHEERLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPLQTFDLP-GATCMTTCPVGGGRGDLTYVATANSV-----------------------------------------------NL----------LKLIPIEFQVETLAESGSYEDALSLCAMCKDMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVPPGGSLQGPNSRKKGPTSSGEPPRQ---------LTGVSRSRAASAVMTFLERHRPAIVAAA-EREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDT-LVLLDTMLISSYVQCSPPRHSALVELLSGPNR-CSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRQAVIKKTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXWTAPQFRRWLAAYLRELRLSPEPAHRALVPRSVKPLLEADPALGLSVF 1638
+V WQ + +R++ LPETP S L E + K +A +K +S + + SP L + R LDA GG G S +IL SS R+L+SS SRG+L +L V EER+ W++ P+ + ++AF V AL +EVH +A+L +QT L G T C GG D +Y + SV NL L+++P+ Q++ L +S YEDAL+LCA C D L I ERYAY L+S GD+EGA H+L AE + V LFPS+ PPE S + S + S P + L G S SRAA+A+ +F R +++ E D ++ DT LVL+DTMLI++++QCSPPR +V LL P++ C L+ APLLAA G + E LL LYR + H+ ALAL EDR W +FR W A YLR L S EP + +L P+ PALGL+VF
Sbjct: 140 KVYVWQRGGILKDVKREYTLPETPSSAYLGDE-------CNANKATIAQKKRGVFSALGVSNPKEMPDGSSPDLFI--RKLLDAP-----------GGTGPS---LILSGNQSSRNDERLLVSSQSRGILFNLRAISAYLTLPFKSVPNPTEERIAWSSAPIVLKTASAF-VLALLESTIEVHFVATLTHIQTISLGNGFTATALC---GGALDESYDVESKSVVDVSTATDDSEFQKFAGTVAGSLGVHEGQRDCDKHRKRKSIPPSCLGNLYCFGDRKGVVLQMLPVGRQLQALLDSARYEDALALCASCTDCRH----EALIIEERYAYALYSRGDFEGASQHWLNAEAAPEAVAELFPSICPPELSLLLASKK--TSLQTSDQSGTSMPEKYDALLLKPILRGASLSRAAAAIASFFAVARRRLISCVTEYSDGNRSSKCDASEVQ--------------------------DTQLVLVDTMLIAAWLQCSPPRVEDVVFLLQDPSQQCELEYVAPLLAAGGALYAEPLLWLYRSKQAHQRALALLVEDRCCAENNE-------------------------GSQAWDRDRFRCWKARYLRWLWFSGEPRNASLAIEHAAPVFSTAPALGLAVF 693
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: F0YIN5_AURAN (CNH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN5_AURAN) HSP 1 Score: 152 bits (385), Expect = 4.490e-35 Identity = 156/522 (29.89%), Postives = 211/522 (40.42%), Query Frame = 1
Query: 289 VILPVPASSARGARVLLSSGSRGLLVDLVG-------------RGHEERLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDLTYVATANSVN--------------------------------------------------LLKLIPIEFQVETLAESGSYEDALSLCAMCKDMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVPPGGSLQGPN--------SRKKGPTSSGEPPRQLTGVSRSRAASAVMTFLERHRPAIVAAAEREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTLVLLDTMLISSYVQCSPPRHSALVELLSGPN-RCSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRQAVIKKTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXWTAPQFRRWLAAYLRELRLSPEPAHRALVPRSVKPLLEADPALGLSVF 1638
+I+P SS R++ SS SRG+L + EER+TWT P+ + ST+ F+ L +EVH + SLA +Q L G TT GG R +L +N+ + +L++ ++ QV+ L +S YEDAL+LCA G + + ERYAY L+S GD+EGA H+L AET V LFPS+ PPE G SR+K S P L G S SRAA+A+ +F E R R + + ++ + D L L+DTMLI+ ++QCSPPR +V LL P RC L+ APLLAA G + E LL LYR + H+ ALAL E TRC W QF RW YL+ L S + + L + A PALGL+VF
Sbjct: 399 LIIPGSQSSPGKKRLIASSQSRGILYGIHALTTFLVLPSLQLLNPLEERITWTTAPIML-KSTSAFIVGLLGNTLEVHFIPSLALVQKISLEGGFIATTL-CGGVRDELADDCESNTGDFLNVTDISPALKPLSKLDAMRNMSNQTRSRNSGGTPSLDDLFCLGDTGGFVLRMTSVDDQVQNLLDSAQYEDALALCASSA-RKFHGDSRL--VEERYAYALYSRGDFEGASQHWLNAETAPQAVADLFPSIRPPELSTRLGLRSDDGEFAVLETVSREKHHALSSMP--LLRGASLSRAAAAIASFFEITR-------RRLNARSSEGSMLDYKNTETVC---------------------DQLALVDTMLIAVWLQCSPPRIKDVVALLRDPGQRCELEYVAPLLAAGGAVYAEPLLWLYRSKHAHQRALALLVE--------TRCCGDVNGA--------------------WDRVQFLRWKTRYLQWLWFSDDQRNTNLALEHAPSVFAASPALGLAVF 857
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: A0A7S3JUX9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUX9_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.110e-35 Identity = 154/544 (28.31%), Postives = 225/544 (41.36%), Query Frame = 1
Query: 289 VILPVPASSARGARVLLSSGSRGLLVDLVGRGH------------EERLTWTAPPLSVCLSTAFFVAAL--PRQQVEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDL----------TYVATANSVN------------------------------------------------LLKLIPIEFQVETLAESGSYEDALSLCAMCKDMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVD--HVLSLFPSLAPPEFVPPGGSLQGPNSRKKG----PTSSGEP---------------PRQLTGVSRSRAASAVMTFLERHRPAIVAAAEREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTLVLLDTMLISSYVQCSPPRHSALVELLSGPNR-CSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRQAVIKKTRCXXXXXXXXXXXXXXXXXXXXXXXXXXXWTAPQFRRWLAAYLRELRLSPEPAHRALVPRSVKPLLEADPALGLSVF 1638
+++P S+ R+L+S+G RGL+ D G E+RL W+APP+ + AF V+ L R ++E+H +LA +QT DL C GG T VAT+ + LL+++ + Q+ L ++G YEDAL+L A + + + RYAY L+S GD+EGAV H+L + V+ V++LFP+L P + G LQ + +G PTSSG+ P L S SRAA+A++ FLE R ++ E ++ + L L+DT L+S+ +QC+PPR +V+LL N+ C L + APLLAA GP++ E LL LYR +GLH ALA+ E+R V WT QFR+W A Y+R L S +P L + L + PALGL+VF
Sbjct: 291 LLIPGSQSAPEYPRLLVSAGGRGLVFD-AGETRALTYGAPRPAPLEDRLAWSAPPVLSVAAVAFVVSVLGPKRTRIEIHFAVTLALVQTVDLAKPAL---CLCGGALKPWARTPDDAINDTVVATSEQSSAGFSAAAAVRKRPQQERKEKYIFTGSSSPQEPLQGAEFLVLGPGTFCRLLRMVDAKTQINHLVQAGHYEDALALAAAAEIHE-----SEPQVEARYAYALYSRGDFEGAVFHWLRSPEIVEASDVVALFPNLCPADL---GAKLQ---QQARGWLSSPTSSGKDTTEFPLPEKLEALRHPPPLRQASLSRAAAALVHFLESTRQRLLLVPTNESRLRSSGNRKLSAREL------------------------EQLGLIDTTLVSARLQCTPPRVRDVVQLLKSENQHCDLDSVAPLLAAGGPAYAEPLLWLYRSKGLHSRALAMLVEERCCV----------------STDDSSIATDDTAGPRPWTKIQFRKWKARYVRTLWFSRDPRLAGLALEATATLFDVAPALGLAVF 779
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: A0A804JUJ9_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JUJ9_MUSAM) HSP 1 Score: 103 bits (256), Expect = 3.890e-19 Identity = 117/469 (24.95%), Postives = 202/469 (43.07%), Query Frame = 1
Query: 40 RDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMDTTTGALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEE-RLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPL-QTFDLPGATCMTTCPVGGGRGDLTYVAT-ANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMC--KDMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEF--------------------VPPGGSLQGPNSRKKGPTSSGEPPRQLTGVSRSRAASAVMTFLERHRPAIVAAAEREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTLVLLDTMLISSYVQCSPPRHSALVELLSGPNRCSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALAL 1371
++F +P+ +SMA G + + +R+EY +M++TTGALS G + +++P+P +LL + G+ VD G+ ++ R+ W+ P SV + + V LPR +E+ L + PL QT L + + + + + T +N+V L +P+ Q+ L SG +E+ALSLC + +D S+ S L IH RYA+ LF+ G+YE A+ FL ++ + ++LSL+PS+ P+ V S + +S + S + ++ +S + A A++ FL++ R I ER + ++ + +LDT L+ + + + S+++ELL GPN C L+ C L + LL LY+ G+H DAL L
Sbjct: 162 KEFGVPDVVKSMAWC-----------GENICVGVRREYMIMNSTTGALSEIF-----------------------SSGRIAPSLVVPLPT-----GELLLGKDNIGVFVDQNGKLLQDGRICWSEAPASVVVQKPYAVGRLPRH-IEIRSLRAPYPLVQTVGLRDVHLLL-------QSNNSLITTLSNAVYGLLPVPLIAQIVQLTASGDFEEALSLCKLIPPEDSSLRASKESL-IHIRYAHHLFNNGNYEEAMEQFLASQEEITYILSLYPSIILPKLQTVSVPEKFADANDELHLSRVSSDASDETESSLSQHYESDDKSTLEIKKMSHN-ALMALVKFLQKKRQGIF---ERATAEVTEEVVQDSISSYEPYRSKSSNKKGGGYTHISSVAR-EMATILDTALLQALILTG--QSSSVLELLKGPNFCDLKTCEKFLMERNQHTL--LLELYKYNGMHRDALKL 573
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: A0A6I9R145_ELAGV (vacuolar sorting protein 39 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9R145_ELAGV) HSP 1 Score: 99.8 bits (247), Expect = 4.820e-18 Identity = 120/472 (25.42%), Postives = 196/472 (41.53%), Query Frame = 1
Query: 40 RDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMDTTTGALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILPVPASSARGARVLLSSGSRGLLVDLVGRGHEE-RLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPL-QTFDLPGATCMTTCPVGGGRGDLTYVAT-ANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCK-DMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSL--------APPEFVPPGGS---LQGPNSRKKGPTSSGEPPRQLTGVSRS---------RAASAVMTFLERHRPAIVAAAEREDCQKA-DDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTLVLLDTMLISSYVQCSPPRHSALVELLSGPNRCSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALALATE 1380
++F +P+ +SMA G + L +R+EY +M+ TTGALS G + +++P+P+ +LL + G+ VD G+ ++ R+ W+ P SV + + V LPR VE+ L + PL QT L + + + +AT +NSV L +P+ Q+ L SG +E+AL+LC + + S L + SIH RY + LF G YE ++ FL ++ +++VLSL+PS+ A PE P L +S S P + +S A A++ +L + R +I+ A E ++ DA + +LDT L+ + + + S +EL+ GPN C L+ C L ALL LY+ +H +AL L +
Sbjct: 154 KEFGVPDVVKSMAWC-----------GENICLGIRREYMIMNCTTGALSEVFP-----------------------SGRIAPPLVVPLPS-----GELLLGKDNIGVFVDQNGKLLQDGRICWSEAPASVAIHKPYAVGRLPRH-VEIRSLRAPYPLVQTVVLRDVHLLL-------QSNNCVIATLSNSVYGLLPVPLGAQIVQLTASGDFEEALALCKLLPPEDSTLRAAKESSIHMRYGHYLFDNGSYEESMEQFLASQVDINYVLSLYPSIVLPKVLTIAEPEKFPDLNDESLLSRVSSDASDEIESSSPSQLQESDDKSMLEIKKMSHNALMALVKYLHKRRYSIIERATAEVTEEVVSDAVQDSITSEPYRSKSSSKKRRPTHISSVAR---EMATMLDTALLQALLLTG--QSSGALELVKGPNYCDLKICEEFLKERNQ--YTALLELYKSNEMHREALRLLNQ 571
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Match: A0A2G5EAA1_AQUCA (CNH domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5EAA1_AQUCA) HSP 1 Score: 99.4 bits (246), Expect = 6.430e-18 Identity = 116/472 (24.58%), Postives = 189/472 (40.04%), Query Frame = 1
Query: 40 RDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEYSVMDTTTGALSPALLLSDRDQLDASASSMTSSISGLGGGGSSSHGVILP---VPASSARGARVLLSSGSRGLLVDLVGRGHEE-RLTWTAPPLSVCLSTAFFVAALPRQQVEVHDLASLAPLQTFDLPGATCMTTCPVGGGRGDLTYVATANSVNLLKLIPIEFQVETLAESGSYEDALSLCAMCK-DMSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPP------------EFVPPGGSLQGPNSRKKGPTSSGEPPRQLTGVSRSRAAS---------AVMTFLERHRPAIVAAAEREDCQKADDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--DTLVLLDTMLISSYVQCSPPRHSALVELLSGPNRCSLQACAPLLAASGPSFIEALLCLYRGRGLHEDALAL 1371
+D+ +P+ +SM+ G + + +RKEY +++ T+GALS G I P VP SS +LL + G+ VD G+ ++ +++W+ P V ++ + + LPR +E+ L +QT L + + A NSV L +P+ Q+ L SG +E+AL+LC M + S L + SIH RY + LF YE A+ FL ++ V +VLSLFPS+ P ++ L +S T P L + + S A++ FL++ R I+ ER + ++ G + +LDT L+ + + + SA +ELL GPN C ++ C L ++ ALL LY+ G+H +AL L
Sbjct: 163 KDYGVPDVVKSMSWC-----------GENICIGIRKEYMILNITSGALSEVF----------------------------PSGRIAPPLVVPLSSGE---LLLGKDNIGVFVDQNGKLQQDGKISWSEAPSVVVINKPYAIGHLPRF-IEIRSLRDYQLVQTVALRSGYRLLQ------SNNFAIAALDNSVYGLFPVPLGAQIVQLTASGKFEEALALCKMLPPEDSSLRAAKEASIHLRYGHSLFDIARYEEAMEQFLASQVDVTYVLSLFPSIVQPKSLAIREPEKVADYAGDVSYLSRASSDASEDTEFSPPSHMLDSDNNTLLESQKTSYNSLVALVKFLQKKRYTIL---ERATAEGTEEIVLDAVGESNLSSDSSRSKYAYKERSNIHIGSGSREMATILDTALVQALLLTG--QSSATLELLRGPNYCDVKICEEFLLQK--NYSSALLELYKCNGMHREALKL 578 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7090.18176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7090.18176.1 >prot_Ecto-sp13_S_contig7090.18176.1 ID=prot_Ecto-sp13_S_contig7090.18176.1|Name=mRNA_Ecto-sp13_S_contig7090.18176.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=604bp QVLAWQAVSLAPRRDFPLPETPRSMALVPEDADGPAGSSGPKLVLALRKEback to top mRNA from alignment at Ecto-sp13_S_contig7090:23..6814+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7090.18176.1 ID=mRNA_Ecto-sp13_S_contig7090.18176.1|Name=mRNA_Ecto-sp13_S_contig7090.18176.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7090:23..6814+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7090:23..6814+ >mRNA_Ecto-sp13_S_contig7090.18176.1 ID=mRNA_Ecto-sp13_S_contig7090.18176.1|Name=mRNA_Ecto-sp13_S_contig7090.18176.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7090:23..6814+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |