prot_Ecto-sp13_S_contig709.18174.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig709.18174.1
Unique Nameprot_Ecto-sp13_S_contig709.18174.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length346
Homology
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BLAST of mRNA_Ecto-sp13_S_contig709.18174.1 vs. uniprot
Match: A0A6H5KKT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT2_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 4.480e-85
Identity = 296/346 (85.55%), Postives = 298/346 (86.13%), Query Frame = 0 
Query:    1 MFALRSSPSSLVCDIRDGWAATSTAVLPAPRPRRASVRLIYPQYDSPPAXXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMSKEVVEVGQAGAPVAAMAAEKXXXXXXXXXXXXXXXXXXXXXSREWRDGDXXDGLAGISRGQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFLFDMEGLKETTFEDQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPA-EVKGRNNGDASCRGIVPQQQEGTPPRTAAGRGLSPAAAPGGGGAAREVSYAGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC 345
            MFALRSSPSSLVCDIRDGWAATSTAVL APRPRRASVRLIYPQYDSPPAXXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMSKEVVEVGQAGAP AAM    XXXXXXXXXXXXXXXXXXXXX        XX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FDMEGLKETT     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EV+GRNN  A CRG+VPQQQEGT  RTAAGRGLSPA A  G GAA EVS AGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC
Sbjct:    1 MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPQYDSPPAXXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMSKEVVEVGQAGAPAAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDMEGLKETTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEGRNNAGAPCRGVVPQQQEGTTARTAAGRGLSPAEAAAG-GAACEVSCAGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC 345
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BLAST of mRNA_Ecto-sp13_S_contig709.18174.1 vs. uniprot
Match: D8LHJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ3_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 1.050e-35
Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0 
Query:    1 MFALRSSPSSLVCDIRDGWAATSTAVLPAPRPRRASVRLIYPQYDSPPAXXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQ 94
            MFALRSSPSSLVCDIRDGWAATSTAVL APRPRRASVRLIYP YDSP  XXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQ
Sbjct:    1 MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPHYDSPXXXXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQ 94
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig709.18174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKT2_9PHAE4.480e-8585.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHJ3_ECTSI1.050e-3595.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig709contigEcto-sp13_S_contig709:6519..7556 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig709.18174.1mRNA_Ecto-sp13_S_contig709.18174.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig709 6517..7556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig709.18174.1 ID=prot_Ecto-sp13_S_contig709.18174.1|Name=mRNA_Ecto-sp13_S_contig709.18174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
MFALRSSPSSLVCDIRDGWAATSTAVLPAPRPRRASVRLIYPQYDSPPAA
SADDRAAAAGGDDGGSVSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMS
KEVVEVGQAGAPVAAMAAEKAAALVVEERRAFAAGGAAARDSREWRDGDD
DDGLAGISRGQHAAARSAAAMAAGGGVARREEDSLSCFEEEEDFLFDMEG
LKETTFEDQQENISNRRDSSGSSSMRSAAAAAADHHGYSRSGGWGTTTTA
AAAAAAAPAEVKGRNNGDASCRGIVPQQQEGTPPRTAAGRGLSPAAAPGG
GGAAREVSYAGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC*
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