mRNA_Ecto-sp13_S_contig7089.18171.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7089.18171.1
Unique NamemRNA_Ecto-sp13_S_contig7089.18171.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 644 bits (1661), Expect = 1.250e-219
Identity = 326/329 (99.09%), Postives = 328/329 (99.70%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQXXXXXXXXHSRYRR 987
            QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKR+QVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSL KHLQQHGH+GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQXXXXXXXXHSRYRR
Sbjct:  191 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQXXXXXXXXHSRYRR 519
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 511 bits (1316), Expect = 1.900e-169
Identity = 258/329 (78.42%), Postives = 283/329 (86.02%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQXXXXXXXXHSRYRR 987
            QPYLEQGDGPIVLV+APTRELAVQIKEECDKFG SS+IKNTCVYGGVPKR QV DL+RGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+ LARDFL +YYQVTVGSLEL+ANKDI+Q+IE  EDF KYR L KHLQ+H ++G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK Q ERD VL DFK G   +LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF +KNS+  RELI+IL ++   VP EL  M     XXXX+ RY R
Sbjct:   88 QPYLEQGDGPIVLVIAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRSQVYDLSRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSELSGMAMGGGXXXXYGRYGR 416
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 504 bits (1299), Expect = 1.450e-165
Identity = 244/315 (77.46%), Postives = 275/315 (87.30%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQ 945
            QPYL+ GDGPIVLV+APTRELAVQIK+ECDKFG +S IKNTC+YGGVPKR Q+ DL RG+EI IATPGRLID LESG TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQVTVGSLEL+ANKD+ QIIEC EDF KYR L +HL++ G   K L+FVETKKGCDALTRSLR DGY ARCIHGDK Q+ERD+VL++F+    ++LVATDVAARGLDVK+I  V+NFDFP NMEDY+HRIGRCGRAGAKG A+SFF SKN++  RELI+IL ++ +HVP EL Q Q
Sbjct:  175 QPYLQPGDGPIVLVIAPTRELAVQIKQECDKFGGTSGIKNTCLYGGVPKRTQLYDLKRGIEIAIATPGRLIDHLESGATNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQELAQFQ 489
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 492 bits (1267), Expect = 8.270e-161
Identity = 242/314 (77.07%), Postives = 273/314 (86.94%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQM 942
            QPYL+ GDGPIVLVVAPTRELA+QIKEECDKFG SS IKNTCVYGGVPKR QV DL  GVEIV+ATPGRLID LE G TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQVTVGSLEL AN DI+Q+IE  ED+ KY  L +  +  G   K LVFVETK+GCDALTRSLR DG+ ARCIHGDKTQ+ERD+VLK+F+  + ++LVATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKG AVSFFGSKN++  REL++I+ E+ + VP  LQQM
Sbjct:  170 QPYLQPGDGPIVLVVAPTRELALQIKEECDKFGGSSGIKNTCVYGGVPKRAQVADLRAGVEIVVATPGRLIDHLEGGTTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRG-GPKALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSLQQM 482
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 490 bits (1262), Expect = 8.600e-161
Identity = 243/314 (77.39%), Postives = 271/314 (86.31%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQM 942
            QPYL+ GDGPIVLVVAPTRELAVQIK ECDKFG SS IKNTCVYGGVPKR QV DL RGVEIVIATPGRLID LESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEVQALARDFL +YYQVTVGSL+L+ANKDI+Q +E  ED++KY  L ++L++H   G+VL+FVETKKG D L RSLR DG+ A  IHGDKTQ+ERDY LK+F+ G   +LVATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR  RAGAKG +V+FF SKN+R  R+L KIL+ES N VPP L  M
Sbjct:  126 QPYLQPGDGPIVLVVAPTRELAVQIKVECDKFGHSSGIKNTCVYGGVPKRTQVMDLQRGVEIVIATPGRLIDHLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPALAGM 439
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 468 bits (1203), Expect = 1.850e-153
Identity = 235/314 (74.84%), Postives = 263/314 (83.76%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQM 942
            +PYLE GDGPIVLV+APTRELA+QIK+ECDKFGRSS IKNTCVYGGVPKR QV DL RG+EIV+ATPGRLID LESG TNLRRVTYLVLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ+LARDFL   YQVTVGSL+LAANKDIKQ +   ED +KY  L + L+++   GKVLVFVETK+GCD L RSL+ DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K+ R  REL KIL ES N VP  L+ M
Sbjct:   35 RPYLESGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLKRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAALRGM 348
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A7S2W2X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2X9_9STRA)

HSP 1 Score: 470 bits (1210), Expect = 1.470e-152
Identity = 240/329 (72.95%), Postives = 274/329 (83.28%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQXXXXXXXXHSRYRR 987
            QPYL++GDGPIVLV+APTRELAVQIK ECDKFG SS+IKNTCVYGGVPKR QV DL  GVEIVIATPGRLID LESG TNLRRVTYLV+DEADRMLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEV+ LARDFL +YYQVTVGSLEL ANK I+Q++E  +D +KYR     L++     +V++FVETK+G D LTRSLR DGY A  IHGDKTQ+ERD VL +F+ G   +LVATDVAARGLDVK++QMV+NFD PNN EDY+HRIGRCGRAGA GV++S+F  K ++ GRELI+IL E+   VPPEL+    XXXXXXX SRY R
Sbjct:  158 QPYLQRGDGPIVLVLAPTRELAVQIKGECDKFGGSSQIKNTCVYGGVPKRTQVGDLRNGVEIVIATPGRLIDHLESGVTNLRRVTYLVMDEADRMLDMGFEPQIRKIVQQIRPDRQTLMWSATWPKEVEGLARDFLTNYYQVTVGSLELTANKAIRQLVEVVDDHDKYRRCSDFLRREFKGERVIIFVETKRGADQLTRSLRMDGYPASAIHGDKTQDERDRVLAEFRQGRCNMLVATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGVSMSYFTRKAAKMGRELIRILREAGQEVPPELEAAAMXXXXXXXXSRYGR 486
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: W7U315_9STRA (Dead-box atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA)

HSP 1 Score: 470 bits (1209), Expect = 2.140e-152
Identity = 236/314 (75.16%), Postives = 264/314 (84.08%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQM 942
            QPYLE GDGPIVLV+APTRELA+QIK+ECDKFGRSS IKNTCVYGGVPKR QV DL RG+EIV+ATPGRLID LESG TNLRRVTYLVLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ+LARDFL   YQVTVGSL+LAANKDIKQ +   ED +KY  L + L+++   GKVLVFVETK+GCD L RSL+ DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K++R  REL KIL ES N VP  L+ M
Sbjct:  165 QPYLESGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLKRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAALRGM 478
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BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A7S3NF06_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NF06_9STRA)

HSP 1 Score: 466 bits (1200), Expect = 2.080e-150
Identity = 227/314 (72.29%), Postives = 262/314 (83.44%), Query Frame = 1 
Query:    1 QPYLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQM 942
            QPYL+ GDGPIVLV+APTRELAVQIK ECDKFG SS+IKNTCVYGGV KR Q NDL RG+EIVIATPGRLID LE+G TNLRRVTYLVLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+ LA DFL  YYQVTVGSL+LAAN DI+QII   ED  KY+ +   L     + K+LVFVETK+G D LTRSL++D + ARCIHGDK+Q ERD+VL DF+ G   +L+ATDVAARGLD+KDIQ V+NFDFP+N+EDY+HRIGRCGRAG KG A+SFF +K+ +  R LIKIL +++  VPP+L  M
Sbjct:  199 QPYLQPGDGPIVLVIAPTRELAVQIKVECDKFGASSQIKNTCVYGGVSKRGQANDLERGIEIVIATPGRLIDFLENGTTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVRTLANDFLKDYYQVTVGSLDLAANTDIEQIIHVVEDATKYKRMVDFLHDRPANDKMLVFVETKRGADQLTRSLQKDRFSARCIHGDKSQAERDWVLNDFRSGKCMLLIATDVAARGLDIKDIQTVVNFDFPSNLEDYVHRIGRCGRAGQKGTALSFFTAKSIKWSRRLIKILQDAKQQVPPDLISM 512
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Match: A0A6S9IVW3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9IVW3_9STRA)

HSP 1 Score: 453 bits (1165), Expect = 3.470e-148
Identity = 229/314 (72.93%), Postives = 262/314 (83.44%), Query Frame = 1 
Query:    7 YLEQGDGPIVLVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRVQVNDLNRGVEIVIATPGRLIDLLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLGKHLQQH-GHSGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGS-KNSRNGRELIKILTESENHVPPELQQM 942
            YL+ GDGPIVL++APTRELAVQIKEECDKFG SS+IKNT VYGGVPK  QV DL +GVEIVIATPGRLID LE   TNL+RVTYLV+DEADRMLDMGFEPQ+RKI SQIRPDRQ LMWSATWPKEV+ LARD+L  +YQVTVGSL+LA NKD+ Q+IE   D +KYR+L KHL+++     +VLVFVETKKGCD LTRSLR DG+QAR +HGDK+QEERD+VL++FK     +LVATDVAARGLDV DI+MV+NFDFPN+ME YIHRIGR GRAG KGVAVSFF S KN R  RELI IL  +  ++P ELQ M
Sbjct:    3 YLKPGDGPIVLILAPTRELAVQIKEECDKFGASSDIKNTVVYGGVPKSRQVRDLRQGVEIVIATPGRLIDHLEQSNTNLKRVTYLVMDEADRMLDMGFEPQLRKICSQIRPDRQVLMWSATWPKEVENLARDYLKEFYQVTVGSLDLAGNKDVTQVIEVCSDQDKYRNLLKHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYIHRIGRTGRAGKKGVAVSFFVSQKNGRLARELIDILQRTHQNIPGELQGM 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7089.18171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ5_ECTSI1.250e-21999.09DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A6H5KBB2_9PHAE1.900e-16978.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XX29_9STRA1.450e-16577.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9KNI1_HETAK8.270e-16177.07Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835ZEN1_9STRA8.600e-16177.39DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A4D9CVW6_9STRA1.850e-15374.84Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2W2X9_9STRA1.470e-15272.95Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7U315_9STRA2.140e-15275.16Dead-box atp-dependent rna helicase n=1 Tax=Nannoc... [more]
A0A7S3NF06_9STRA2.080e-15072.29Hypothetical protein n=3 Tax=Aureoumbra lagunensis... [more]
A0A6S9IVW3_9STRA3.470e-14872.93Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7089contigEcto-sp13_S_contig7089:165..4433 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score460.7
Seed ortholog evalue4.1e-127
Seed eggNOG ortholog2880.D7FGZ5
Preferred nameDBP2
Model size3048
KEGG koko:K12823
KEGG Pathwayko03040,ko05202,ko05205,map03040,map05202,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0051179,GO:0060255,GO:0060293,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0071042,GO:0071047,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990120,GO:1990904
Exons3
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
Cds size708
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463971.8618982-UTR-Ecto-sp13_S_contig7089:164..4251681463971.8618982-UTR-Ecto-sp13_S_contig7089:164..425Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7089 165..425 +
1681463971.876045-UTR-Ecto-sp13_S_contig7089:954..9751681463971.876045-UTR-Ecto-sp13_S_contig7089:954..975Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7089 955..975 +
1681463971.9099774-UTR-Ecto-sp13_S_contig7089:2375..44331681463971.9099774-UTR-Ecto-sp13_S_contig7089:2375..4433Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7089 2376..4433 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463971.8873842-CDS-Ecto-sp13_S_contig7089:975..11161681463971.8873842-CDS-Ecto-sp13_S_contig7089:975..1116Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7089 976..1116 +
1681463971.8987489-CDS-Ecto-sp13_S_contig7089:1808..23751681463971.8987489-CDS-Ecto-sp13_S_contig7089:1808..2375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7089 1809..2375 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7089.18171.1prot_Ecto-sp13_S_contig7089.18171.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7089 976..2375 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7089.18171.1

>prot_Ecto-sp13_S_contig7089.18171.1 ID=prot_Ecto-sp13_S_contig7089.18171.1|Name=mRNA_Ecto-sp13_S_contig7089.18171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTV
GSLELAANKDIKQIIECTEDFNKYRSLGKHLQQHGHSGKVLVFVETKKGC
DALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARG
LDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGR
ELIKILTESENHVPPELQQMQMMGGGGGGHSRYRR*
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mRNA from alignment at Ecto-sp13_S_contig7089:165..4433+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7089.18171.1 ID=mRNA_Ecto-sp13_S_contig7089.18171.1|Name=mRNA_Ecto-sp13_S_contig7089.18171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4269bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7089:165..4433+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCGTACCTAGAGCAGGGAGACGGCCCGATCGTCCTGGTCGTGGCGCC
GACCCGCGAGCTGGCGGTGCAGATCAAGGAGGAGTGCGACAAGTTCGGCA
GGTCCTCGGAGATCAAGAACACGTGCGTGTACGGAGGCGTGCCCAAGCGC
GTCCAGGTTAACGACCTGAACCGGGGGGTCGAGATCGTGATCGCCACCCC
CGGCCGCCTGATCGATCTTCTCGAGTCGGGCAAGACTAACCTGCGCCGCG
TCACTTACCTGGTGAGTGTATGGTGTGTGCGGGCATGATCCTGCATCGGA
GTCCATGCATCCGTGTGGTTTGTGTGTGTCTTTTTATTTGTGGGCATCGA
CCGTGTGCCAACCGGCTGACGGTCTCAGGGAAGCTGAAAAGCGCCTCTTA
ACTGTGTGTTTTAGAAGTGTTCCTCGGTTGTGTCATGACTGTTATTGCTG
TGCATGAGGGGGTGCCGGTGGTGTCGTACTCTCGTTGGGTGGTGTGAAAA
AAATTGGTACTAAGCGTTCGGTTCAACTAACCGTTGACCCCGCTCACCGT
GATGGGCACTCAACAGAGGAGGTGGGCCAGGCTCCATCTATCCTACTGGG
ATAAATAGTTGTAACGCAACAAGCTGGGTGGAGCGACATGGAACCGTCCT
CCTTAACCCGGAGGCAAGATGATAAGGCAGAAGACGGTCACTTGTCCCCA
CCCCCGCGAATCATATGCCCACACTATACCCTAGGTGTTGCTGTATTTGA
TGCATACCCCAAACTGCTGTACGCGCTGTTTGAAACACAGGTTCTGGACG
AGGCAGACCGCATGCTGGACATGGGGTTCGAGCCCCAGATCCGCAAGATC
GTGAGCCAGATCAGGCCCGACAGGCAGACGCTCATGTGGAGCGCTACCTG
GCCCAAGGAGGTGCAGGCGCTGGCGCGTGACTTCCTACACCACTACTACC
AGGTGCGTCTGTTATTTTTTTGTTGTGAGGGTGCTTGTTCGTTGATTGGT
TGGCTGTCGGAGGTGTTCGTTGATCGTAGGTTTTGAGATGGCTGTTGTAG
ATTATGTGGTCGGCCCCAATTGAGGTTGTGGGCAGGCACTCGTCGAGGTT
GGAAATTGTAGCAATACTCGCTTTTTTTTCTTTTGAGTCCGGTGGAACAA
ATGTTTGCTGTTGTGACAACGCGGAAGAACCCGGACAGTGGTCGGCGTTG
TTGGACGATTGGTGGTGGGTGAGCGTAAGGCGCTCTTGCAGCATGTTGAC
CTCGGCGGCGGCTGTGGCGGCCATATGCGGTTAGTGTCGCTTCTCTTGGA
GAGAACGGGCACACATTTATGAGAGCCAAGGGGCACAACTTGTGTGTGAG
CGAAGGGGCACAGCGGTAGTGTCCACAGCAATGCGCGTCGTCAGGTCGAG
GTACAGGTTGTTGTGGGCGCATGTAGAGCGCGGGTCATCCCATTCATCTG
TAAAAGACGAGTTCTGTCGTCGTTTCGGCCAAAAACGGCAGGTCAAGCGT
GCCGAGGACAGCGGCCGCCGGTTGAATAGCATGCTCGCCACGGTGAATCG
ATCAACCGGTCGCTATGAATGCACTTGTGAAGAGAAACTAACCACCTTTC
GTTGACACCCCCTCCTTTTTACTAATTGTTTTCGCTTCTTGCAGGTGACG
GTGGGATCCCTGGAGCTGGCGGCGAACAAGGACATCAAGCAGATCATCGA
GTGTACGGAGGACTTCAACAAGTACCGCAGCCTTGGCAAGCACCTGCAGC
AGCACGGCCACAGCGGCAAGGTTCTGGTGTTCGTGGAGACCAAGAAGGGC
TGCGACGCGCTCACACGCTCCCTCCGGCAGGACGGCTACCAGGCCCGCTG
TATCCACGGTGACAAGACACAGGAGGAGCGCGATTATGTCCTCAAGGACT
TCAAGGGCGGGAACTTCCAGGTGCTGGTGGCAACGGACGTGGCCGCGCGC
GGGCTTGACGTGAAGGACATCCAGATGGTGATCAACTTCGACTTCCCCAA
CAACATGGAAGACTATATCCACCGCATCGGGCGGTGCGGCCGAGCGGGCG
CCAAGGGCGTGGCCGTGAGCTTCTTCGGCTCCAAGAACTCCCGCAACGGC
CGCGAGCTCATCAAGATCCTCACCGAGTCGGAGAACCACGTCCCGCCGGA
GTTGCAACAGATGCAGATGATGGGCGGTGGCGGCGGGGGCCACAGCCGAT
ACCGCCGCTAGGCCAAATGGAGGAAAATGGGAAGAGAGGCGTTTTGATTT
TTGCTGAAGTGGTAGGCCGGCTTTCGCTCGCGGGGCACTCGGGGGGGAGT
GCGTGGTGCGATCGAAACATGTACTTGTTGATGACTGAAGTAGACTTGTA
TTCGTTGGAAGGTTATGTTCTCGCTCTGTCGGTCGCTGCGGCGGCGGGTA
TCGGTGTCACAACAACAACGTGTTTCGAGAGACTTCAGGGGTAAAGCGGT
AGGTGGTGATGGTGAAGAGTGCTTGGTTATGAAGACGGGCATGCCGCGGG
GTGTTTTCATAGCGAATGACTGACTGCTTGTTGATGAGGGGAGTACTTAG
GGGTTGTAGGGTTTAGGTGCTGGCGACGATTGGTCTACTTATGATAAGAT
AGTTTGCGTTTTTTAAGGTTGGAGGTAGGTGTGCTGCCTGTCTCGTGAAA
ATGGTCTGGGATCTTTTTCTACAAAACATGCTTCTCTGTTATGATTTGTT
TGTTTCCGCCGCCGTGTCGAAACAGCAGTATCTTTTGCACGACCCTCCAT
CTCTTGCCCCCGAGTAAATAGAACAAAGGGAGAAAAAGGGCTGTGTTGCT
TAGACGGCTTACAGGTTCGGTTTTGTGCGTGCCCCTGCGCGCGGCGGCGG
TAAGGTAGCAAAGCGTGCGAGTAGCCCTCTATGTAGCTGTCTCCGACGGT
CCTTGTTACGGTTCGTTGGTGTCGGCGCCCTCTGTGTCCTCGTGGGTGGA
GGTGGGCTTGGTTGCGGACGGTTACACACCAGGGGAGCAGATGTCTAGGG
GGGTACCGTCGTGCTCAGTTTGTGACGAGAGACAAGAGGTGAAGGAAGGC
ATTGTTGCGGGGCCGCTGGGGAGGGGGGGCGTTAGAGAAGGCCGGTCTGT
TGAAGACGGTCGACAAAGAAGGAGATGGGTCTCACTTGACCGGTGTTGTT
CCGTCGTGCCGCTCGCTCTCGCGAAACAGTCACAGTTTTGGGAGCGGCAA
CTCCAATGTTGCGCCCGGGGCGAGACAGGTGGTGATGGTGTTGTTGAAAC
ATACACGAGGAGCTTCAAAAATGTGTTGTGTGTAGACACTGATGGACAAA
GCACACCACAGCCAAATCGTGTGCTGTTTTTGTTTGGTCGTGTTTGGGAT
TGAGTGCGTCGGGGTACTGTACTGTACCAATCCAGTGTTTCGCGTATCTC
TGCGTGCATGCGCTTTAGTGTCAACATCCGTCCGTATGCCGCGCATTTTG
CCGCTTGGTATGGTAGTCCACAGTAAGGAAGGAGCGGTCATTAGGGCCCC
CCTCCCGCTTAGAGCGAATTCTCAACCCAGCAGCCGCTGGAGGCGTGTTG
CGCCAGTAGAGGGCGTGTCTGGTTGACTTACGGTGGTCGCGTGGTAACAG
CAGGAGTGAGCAGCTGTACTGAGAATCGGGCGGGAAGGGCGTTGCGGGTG
GTGGATGGAGAAGTCTCGGACGGTCGGCTTTCTCTCGAGGGGGAAGAAGC
CACTGGGTCGAGTCACGATATCGAAGATGCCGACAAGAGCAGAAGAGAAC
GCGAGGGGAGCTCACACAGCTGTGGCTCGGGAAGCAATCGAAGCAATCAC
CTTTAGCTAGTATTCTGTTGCTCGTTTGTGGGCTGCTTGTTGGTCAGCAT
ATGATTTTGAGCCCCCCATCACGTAGTTTTCCAATAGCCCTGGTGGAGGC
AAGCCGTCATTCACGACGACTCGGGTTGGTTTGAAGCCGTTCTCACCTCG
TGATGCGAGGACACAAAATTGTATCCACGTTGCCATCCAAACTACGAATC
CACAAAAGTAATAGTATATCCCACTTGAAGACCATAGTACATGTAGTTTC
ACCGTGAAGTGTGTCTGTCATGATCACCTTCTGTCGGAATTCCCAACCCG
AGCAGTGGTTTTACAGGAGGAGCTCCGAGGCGCGACAAAAAATTCCGTTG
GCCGTGTTGCAACAACTCCACAAGTTTGAGCCGGATTGGTGCCTCCTTTG
TTACGTTTGGCTGTGTGTCGACCGTGTCAGCGTGGGATCCGTCCCTCTAT
TCCGAAGGAAGCCGTCGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7089:165..4433+

>mRNA_Ecto-sp13_S_contig7089.18171.1 ID=mRNA_Ecto-sp13_S_contig7089.18171.1|Name=mRNA_Ecto-sp13_S_contig7089.18171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7089:165..4433+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGGACATGGGGTTCGAGCCCCAGATCCGCAAGATCGTGAGCCAGAT
CAGGCCCGACAGGCAGACGCTCATGTGGAGCGCTACCTGGCCCAAGGAGG
TGCAGGCGCTGGCGCGTGACTTCCTACACCACTACTACCAGGTGACGGTG
GGATCCCTGGAGCTGGCGGCGAACAAGGACATCAAGCAGATCATCGAGTG
TACGGAGGACTTCAACAAGTACCGCAGCCTTGGCAAGCACCTGCAGCAGC
ACGGCCACAGCGGCAAGGTTCTGGTGTTCGTGGAGACCAAGAAGGGCTGC
GACGCGCTCACACGCTCCCTCCGGCAGGACGGCTACCAGGCCCGCTGTAT
CCACGGTGACAAGACACAGGAGGAGCGCGATTATGTCCTCAAGGACTTCA
AGGGCGGGAACTTCCAGGTGCTGGTGGCAACGGACGTGGCCGCGCGCGGG
CTTGACGTGAAGGACATCCAGATGGTGATCAACTTCGACTTCCCCAACAA
CATGGAAGACTATATCCACCGCATCGGGCGGTGCGGCCGAGCGGGCGCCA
AGGGCGTGGCCGTGAGCTTCTTCGGCTCCAAGAACTCCCGCAACGGCCGC
GAGCTCATCAAGATCCTCACCGAGTCGGAGAACCACGTCCCGCCGGAGTT
GCAACAGATGCAGATGATGGGCGGTGGCGGCGGGGGCCACAGCCGATACC
GCCGCTAG
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