prot_Ecto-sp13_S_contig12149.1817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12149.1817.1
Unique Nameprot_Ecto-sp13_S_contig12149.1817.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length112
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12149.1817.1 vs. uniprot
Match: A0A6H5L016_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L016_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 5.440e-43
Identity = 89/104 (85.58%), Postives = 89/104 (85.58%), Query Frame = 0 
Query:   15 RDDPPVEKNEDEKEPLPPFTMALAVMLTGLRVLIVDQVLGLHLPVMKLCLASVSCVIENRLESEDNELERRLLRGRRPSSSSS------GRHGGSEAAPPGFRP 112
            RDDPPVE NEDEKEPLPPFTMALAVMLTGLRVLIVDQVLGLHLPVMKLCLASVSCVIENRLESEDNELERRLLRGRRPSS          RHG  EAAPP  RP
Sbjct:  507 RDDPPVETNEDEKEPLPPFTMALAVMLTGLRVLIVDQVLGLHLPVMKLCLASVSCVIENRLESEDNELERRLLRGRRPSSXXXXXXXXXARHGRGEAAPPDVRP 610
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BLAST of mRNA_Ecto-sp13_S_contig12149.1817.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 7.680e-43
Identity = 86/98 (87.76%), Postives = 87/98 (88.78%), Query Frame = 0 
Query:   15 RDDPPVEKNEDEKEPLPPFTMALAVMLTGLRVLIVDQVLGLHLPVMKLCLASVSCVIENRLESEDNELERRLLRGRRPSSSSSGRHGGSEAAPPGFRP 112
            RDDP        +EPLPPFTMALAVMLTGLRVLIVDQVLGLHLPVMKLCLASVSCVIENRLESEDNELERRLLRGRRPSSSS GRHGG EAAPPG RP
Sbjct: 3775 RDDPXXXXXXXXEEPLPPFTMALAVMLTGLRVLIVDQVLGLHLPVMKLCLASVSCVIENRLESEDNELERRLLRGRRPSSSSPGRHGGGEAAPPGVRP 3872
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12149.1817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L016_9PHAE5.440e-4385.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8Y9_ECTSI7.680e-4387.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12149contigEcto-sp13_S_contig12149:813..1445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12149.1817.1mRNA_Ecto-sp13_S_contig12149.1817.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12149 813..1447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12149.1817.1 ID=prot_Ecto-sp13_S_contig12149.1817.1|Name=mRNA_Ecto-sp13_S_contig12149.1817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
AAAAAAAAASETGSRDDPPVEKNEDEKEPLPPFTMALAVMLTGLRVLIVD
QVLGLHLPVMKLCLASVSCVIENRLESEDNELERRLLRGRRPSSSSSGRH
GGSEAAPPGFRP
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