prot_Ecto-sp13_S_contig7078.18159.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7078.18159.1
Unique Nameprot_Ecto-sp13_S_contig7078.18159.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: D7FQB4_ECTSI (U-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB4_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 9.980e-164
Identity = 225/229 (98.25%), Postives = 229/229 (100.00%), Query Frame = 0
Query:    1 MAGGKHAQGQQHSRNGRYDLPAYGNTDSWHDDDMRVAVIILLMALGWIYLKLRGKDANKGWLEALGVGFGGNDPPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQV 229
            MAGGK+AQG+QHSRNGRYDLPAYGNTDSWHDDDMRVAVI+LLMALGWIYLKLRGKDANKGWLEALGVGFGGNDPPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMH+IDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQV
Sbjct:    1 MAGGKYAQGEQHSRNGRYDLPAYGNTDSWHDDDMRVAVIVLLMALGWIYLKLRGKDANKGWLEALGVGFGGNDPPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHDIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQV 229          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: A0A2I0XH53_9ASPA (E3 ubiquitin-protein ligase RGLG2 n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XH53_9ASPA)

HSP 1 Score: 164 bits (416), Expect = 1.510e-45
Identity = 80/154 (51.95%), Postives = 108/154 (70.13%), Query Frame = 0
Query:   77 FASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTR-EYHCLVIIADGQV 229
            F SLE++  AL+++G+  + LI+G+DFT+SNEWTG R +G  S+H I    PNPY++ +  +GR L   +    I C+GFGD +TRD+ VF F AD +PC    +AL+RY  IAP ++LSGPTSFAPLI  AI+IV  +  +YH LVIIADGQV
Sbjct:   39 FNSLEQVTSALRESGLESSNLILGIDFTKSNEWTGRRSFGRKSLHAIGST-PNPYEQAISIIGRTLSAFDEDSLIPCFGFGDASTRDQYVFSFFADHRPCHGFVEALERYRQIAPHLNLSGPTSFAPLIHAAIDIVDRSNGQYHVLVIIADGQV 191          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: B0E8G2_ENTDS (Copine-1, putative n=8 Tax=Entamoeba TaxID=5758 RepID=B0E8G2_ENTDS)

HSP 1 Score: 161 bits (407), Expect = 3.260e-45
Identity = 77/153 (50.33%), Postives = 103/153 (67.32%), Query Frame = 0
Query:   77 FASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQV 229
            + S++EL   L+ AG+  + LI+GVD+T+SN WTG + +   S+H + +   NPYQ V+  +GR L P +    I  YGFGD  T D++VF FM DD PC    + L RY  I P+V LSGPT+FAPLI KA++IVQ TR+YH L+IIADGQV
Sbjct:   30 YQSMDELQEGLRQAGLESSNLIIGVDYTKSNTWTGTKSFNGYSLHGLFENVMNPYQRVIDIIGRTLEPFDDDNLIPVYGFGDVTTTDKSVFSFMPDDTPCNGFQEVLKRYNEITPSVRLSGPTNFAPLINKAVQIVQRTRQYHILLIIADGQV 182          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: A0A6I9Q9S9_ELAGV (E3 ubiquitin-protein ligase RGLG3 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9Q9S9_ELAGV)

HSP 1 Score: 164 bits (414), Expect = 5.480e-45
Identity = 78/154 (50.65%), Postives = 108/154 (70.13%), Query Frame = 0
Query:   77 FASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTR-EYHCLVIIADGQV 229
            F+SL+E++ AL+DAG+  + LI+G+DFT+SNEWTG R +   S+H I D  PNPY++ +  +GR L P +    I C+GFGD +TRDE VF F  + +PC    +AL  Y  I P ++LSGPTSFAPLI  +I+IV+ +  +YH LVI+ADGQV
Sbjct:   44 FSSLDEVITALRDAGLESSNLILGIDFTKSNEWTGRRSFNQRSLHAIGDT-PNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTRDEYVFSFFPNHRPCNGFEEALSHYREIVPCLTLSGPTSFAPLILASIDIVERSHGQYHVLVIVADGQV 196          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: B0ECQ3_ENTDS (Copine-9, putative n=6 Tax=Entamoeba TaxID=5758 RepID=B0ECQ3_ENTDS)

HSP 1 Score: 160 bits (405), Expect = 6.500e-45
Identity = 76/158 (48.10%), Postives = 109/158 (68.99%), Query Frame = 0
Query:   74 PPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKP--NPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQV 229
            P  F+++EEL  AL+ AG+  + L++G+D+T+SN WTG+  +G   +H I+ + P  NPYQ V+  +GR L P +    I  YGFGD  T ++++F FM ++ PCA +A+ L RY  I P+V +SGPT+FAPLIRKAI+IV+ T  YH L+II DGQV
Sbjct:   25 PDQFSTMEELQQALRSAGLESSNLLIGIDYTKSNTWTGKVSFGGQCLHYINPQFPIFNPYQRVIDAIGRALEPFDDDRLIPTYGFGDVTTTNKSLFSFMPNEAPCAGVAEVLRRYNEITPSVQMSGPTNFAPLIRKAIDIVRTTHSYHILLIICDGQV 182          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: A0A0A1UDF2_ENTIV (Copine, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1UDF2_ENTIV)

HSP 1 Score: 159 bits (403), Expect = 7.070e-45
Identity = 76/153 (49.67%), Postives = 102/153 (66.67%), Query Frame = 0
Query:   77 FASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTREYHCLVIIADGQV 229
            + S+EEL   L+ AG+  + LI+GVDFT+SN WTG+  +    +H I +   NPYQ V+  +GR + P +    I  YGFGD NT D++VF F  +DQPC    + L RY  I P V +SGPT+FAPLI KA++IVQ T++YH L+IIADGQV
Sbjct:    8 YHSMEELQDGLRAAGLESSNLIIGVDFTKSNTWTGKNSFKGYCLHSIFENGMNPYQRVIDIIGRTMEPFDDDNLIPVYGFGDVNTTDKSVFSFKVNDQPCNGFQEVLQRYNEITPNVRMSGPTNFAPLINKAVQIVQQTKQYHILLIIADGQV 160          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: A0A804KUW3_MUSAM (RING-type E3 ubiquitin transferase n=3 Tax=Musaceae TaxID=4637 RepID=A0A804KUW3_MUSAM)

HSP 1 Score: 163 bits (412), Expect = 8.680e-45
Identity = 76/157 (48.41%), Postives = 111/157 (70.70%), Query Frame = 0
Query:   74 PPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTR-EYHCLVIIADGQV 229
            P  F+SL++++ AL+++G+  + LI+G+DFT+SNEWTG   +G  S+H I    PNPY++ +  +GR L P +    I CYGFGD +TR+++VF F  D++PC    +AL RY  I P + LSGPTSFAP+I+ +I+IV+ +  +YH LVIIADGQV
Sbjct:   32 PDNFSSLDQVISALRESGLESSNLILGIDFTKSNEWTGRNSFGRRSLHAIGGT-PNPYEQAISIIGRTLSPFDEDNLIPCYGFGDTSTREQSVFSFYPDNRPCHGFEEALARYRDIVPHLKLSGPTSFAPVIQASIDIVKKSNWQYHVLVIIADGQV 187          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: A0A446QGM3_TRITD (Copine domain-containing protein n=4 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446QGM3_TRITD)

HSP 1 Score: 157 bits (397), Expect = 1.080e-44
Identity = 73/154 (47.40%), Postives = 107/154 (69.48%), Query Frame = 0
Query:   77 FASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTR-EYHCLVIIADGQV 229
            ++S++E+V AL++AG+  + LI+G+DFT+SNEW+G   +G  S+H I    PNPY++ +  +GR L P +    I C+GFGD +T D +VF F  +++PC    + LDRY  I P ++LSGPTSFAPLI  A+ +V+ +  +YH LVIIADGQV
Sbjct:   31 YSSVDEVVAALREAGLESSNLILGIDFTKSNEWSGRHSFGRKSLHAISGT-PNPYEQAISIIGRTLSPFDDDNLIPCFGFGDASTHDHSVFSFYQENRPCRGFEEVLDRYRQIVPHLNLSGPTSFAPLIYAAMSVVESSNCQYHVLVIIADGQV 183          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: UPI0008A0CC58 (E3 ubiquitin-protein ligase RGLG2-like isoform X3 n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=UPI0008A0CC58)

HSP 1 Score: 162 bits (410), Expect = 1.750e-44
Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 0
Query:   77 FASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTR-EYHCLVIIADGQVRGG 232
            F+SLEE++ AL+DAG+  + LI+G+DFT+SN+WTG   +   S+H I D   NPY++ +  +GR L P +    I C+GFGD +TRDE VF F  D +P     +AL RY  I P ++LSGPTSFAPLI  AI+IV+ +  +YH LVI+ADGQV  G
Sbjct:   60 FSSLEEVISALRDAGLESSNLILGIDFTKSNDWTGRHSFNRRSLHAIGDTT-NPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTRDEFVFSFYPDHRPSHGFEEALSRYREIVPRLTLSGPTSFAPLILAAIDIVEQSNWQYHVLVIVADGQVTKG 215          
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Match: A0A2I0AG48_9ASPA (RING-type E3 ubiquitin transferase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AG48_9ASPA)

HSP 1 Score: 161 bits (408), Expect = 1.920e-44
Identity = 78/157 (49.68%), Postives = 108/157 (68.79%), Query Frame = 0
Query:   74 PPGFASLEELVGALKDAGVSKAGLIVGVDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEKIWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTSFAPLIRKAIEIVQDTR-EYHCLVIIADGQV 229
            P  F+SL+++  AL+++G+  + LI+G+DFT+SNEWTG R +   S+H ID   PNPY++ +  +GR L P +    I C+GFGD +TRD+ VF F AD +PC    + L RY  + P + LSGPTSFAPLI  AI+IV+ +  +YH LVIIADGQV
Sbjct:   15 PDNFSSLDQVTSALRESGLESSNLILGIDFTKSNEWTGRRSFKRKSLHAIDGT-PNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTRDQYVFSFFADFRPCCGFEEVLARYRQMVPHLDLSGPTSFAPLIFAAIDIVKRSNGQYHVLVIIADGQV 170          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7078.18159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB4_ECTSI9.980e-16498.25U-box domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A2I0XH53_9ASPA1.510e-4551.95E3 ubiquitin-protein ligase RGLG2 n=3 Tax=Dendrobi... [more]
B0E8G2_ENTDS3.260e-4550.33Copine-1, putative n=8 Tax=Entamoeba TaxID=5758 Re... [more]
A0A6I9Q9S9_ELAGV5.480e-4550.65E3 ubiquitin-protein ligase RGLG3 n=2 Tax=Arecacea... [more]
B0ECQ3_ENTDS6.500e-4548.10Copine-9, putative n=6 Tax=Entamoeba TaxID=5758 Re... [more]
A0A0A1UDF2_ENTIV7.070e-4549.67Copine, putative n=1 Tax=Entamoeba invadens IP1 Ta... [more]
A0A804KUW3_MUSAM8.680e-4548.41RING-type E3 ubiquitin transferase n=3 Tax=Musacea... [more]
A0A446QGM3_TRITD1.080e-4447.40Copine domain-containing protein n=4 Tax=Triticum ... [more]
UPI0008A0CC581.750e-4450.32E3 ubiquitin-protein ligase RGLG2-like isoform X3 ... [more]
A0A2I0AG48_9ASPA1.920e-4449.68RING-type E3 ubiquitin transferase n=1 Tax=Apostas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010734CopinePFAMPF07002Copinecoord: 119..229
e-value: 6.9E-27
score: 94.3
NoneNo IPR availablePANTHERPTHR45751FAMILY NOT NAMEDcoord: 77..230
NoneNo IPR availablePANTHERPTHR45751:SF11COPINE FAMILY PROTEIN 1coord: 77..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 33..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7078contigEcto-sp13_S_contig7078:3391..7704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7078.18159.1mRNA_Ecto-sp13_S_contig7078.18159.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7078 3391..7704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7078.18159.1 ID=prot_Ecto-sp13_S_contig7078.18159.1|Name=mRNA_Ecto-sp13_S_contig7078.18159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MAGGKHAQGQQHSRNGRYDLPAYGNTDSWHDDDMRVAVIILLMALGWIYL
KLRGKDANKGWLEALGVGFGGNDPPGFASLEELVGALKDAGVSKAGLIVG
VDFTRSNEWTGERVYGNGSMHEIDDRKPNPYQEVLRGVGRGLGPLNRAEK
IWCYGFGDENTRDEAVFCFMADDQPCANLAQALDRYASIAPAVSLSGPTS
FAPLIRKAIEIVQDTREYHCLVIIADGQVRGGGGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010734Copine