prot_Ecto-sp13_S_contig12147.1815.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12147.1815.1
Unique Nameprot_Ecto-sp13_S_contig12147.1815.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Match: A0A6H5JXU0_9PHAE (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXU0_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 1.040e-78
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0
Query:    1 MDARDTVGGVKAVVQYVREQRPDAMVSVMALFPRADPKHKTSTTPWPVIDEVNRMLERMLRLKFGTKKVLFVNCSDRFVVEDDSGREVLNKEFILPDNLHLTSDGLKAWAECAEAAVHSGLRDN 124
            MDA+DTVGGVKAVVQYVREQRP+AMVSVMALFPRADPKHK STTPWPVIDEVN MLERMLRLKFGTKKVLFV+CSDRFVVEDDSGREVLNKEFI+PDNLHLTSDGLKAWAECAEAAVHSGLRDN
Sbjct:  220 MDAQDTVGGVKAVVQYVREQRPEAMVSVMALFPRADPKHKKSTTPWPVIDEVNGMLERMLRLKFGTKKVLFVSCSDRFVVEDDSGREVLNKEFIMPDNLHLTSDGLKAWAECAEAAVHSGLRDN 343          
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Match: D8LR16_ECTSI (Lipolytic enzyme, G-D-S-L n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR16_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.550e-65
Identity = 98/121 (80.99%), Postives = 109/121 (90.08%), Query Frame = 0
Query:    1 MDARDTVGGVKAVVQYVREQRPDAMVSVMALFPRADPKHKTSTTPWPVIDEVNRMLERMLRLKFGTKKVLFVNCSDRFVVEDDSGREVLNKEFILPDNLHLTSDGLKAWAECAEAAVHSGL 121
            MDA+DTVGGVKAVV+YVREQRPDA+VSVMALFPRADP  K + TPWPVIDEVN +LE +LRLKFGTKKV F++C+DRF+ ED  GREVLNKEFILPDNLHLT DGL AWA+CAEAAVHSGL
Sbjct:  102 MDAQDTVGGVKAVVKYVREQRPDALVSVMALFPRADPNDKKNPTPWPVIDEVNGLLEHLLRLKFGTKKVHFIDCNDRFLAEDRYGREVLNKEFILPDNLHLTGDGLDAWADCAEAAVHSGL 222          
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Match: A0A6H5JTL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL2_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 7.240e-38
Identity = 63/79 (79.75%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    1 MDARDTVGGVKAVVQYVREQRPDAMVSVMALFPRADPKHKTSTTPWPVIDEVNRMLERMLRLKFGTKKVLFVNCSDRFV 79
            MDA+DTVGGVKAVV+YVREQRPDA+VSVMALFPRADP  K + TPWPVIDEVN +LE MLRLKFGTKKV F++C+DR+V
Sbjct:   53 MDAQDTVGGVKAVVKYVREQRPDALVSVMALFPRADPNDKENPTPWPVIDEVNGLLEHMLRLKFGTKKVHFIDCNDRYV 131          
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Match: A0A6H5JXS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS8_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.740e-18
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
Query:   77 RFVVEDDSGREVLNKEFILPDNLHLTSDGLKAWAECAEAAVHSGL 121
            RF+ ED  GREVLNKEFILPDNLHLT DGL AWA+CAEAAVHSGL
Sbjct:   42 RFLAEDRFGREVLNKEFILPDNLHLTGDGLDAWADCAEAAVHSGL 86          
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Match: A0A7C4EHB5_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C4EHB5_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 2.260e-8
Identity = 33/107 (30.84%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    5 DTVGGVKAVVQYVREQRPDAMVSVMALFPRADPKHKTSTTPWPVIDEVNRMLERMLRLKFGTKKVLFVNCSDRFVVEDDSGREVLNKEFILPDNLHLTSDGLKAWAE 111
            +TV G+KA+V+ +R ++P+A V ++ + PR   ++     PW + +++ +  E++ +L    + + F++   RF   D+ G  V   E   PD LHL+++G K WAE
Sbjct:  151 ETVLGIKAIVEEIRRKQPEAKVLILGILPRQPQRY-----PW-IGEKIKKTNEQLAKLA-DRETIFFLDMGSRFA--DEKGNLVA--ELYAPDQLHLSTEGYKVWAE 246          
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Match: A0A7V3D6W6_9BACT (GDSL family lipase n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V3D6W6_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 2.940e-5
Identity = 33/128 (25.78%), Postives = 61/128 (47.66%), Query Frame = 0
Query:    3 ARDTVGGVKAVVQYVREQRPDAMVSVMALFPRA---DPKHKTSTTPWPVIDEVNRMLERMLRLKFGTKKVLFVNCSDRFVVEDDSGREVLNKEF-----ILPDNLHLTSDGLKAWAECAEAAVHSGLR 122
            A    GG+KA++  +++Q+P   + ++ +FPR    D   +T   P   +++    +  ++  K+   K +F           D G+E L K+      I+PD LHL+  G + WA+  +A V   L+
Sbjct:   74 AEQIAGGIKAIIDELKKQKPGMKILLLGVFPRGNRNDADKETKVIPAAKLNKKIAAINEIIS-KYDDGKTVF---------SKDIGKEFLTKDGGLPGDIMPDYLHLSPKGYEIWAKAIKADVEKLLK 191          
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Match: A0A0L0FWE1_9EUKA (SGNH_hydro domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FWE1_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 6.680e-5
Identity = 31/114 (27.19%), Postives = 59/114 (51.75%), Query Frame = 0
Query:    1 MDARDTVGGVKAVVQYVREQRPDAMVSVMALFPRADPKHKTSTTPWPVIDEVNRMLERMLRLKFGTKKVLFVNCSDRFVVEDDSGREVLNKEF-----ILPDNLHLTSDGLKAW 109
            +DA DT+ G+KA+V Y+R ++P A + VMAL PR +  ++        + + ++++   L+  + T      + +  +V+  D G E L  +      ++PD LH+ + G   W
Sbjct:  149 VDAEDTIKGIKAIVNYIRTEKPSARIVVMALLPRGERPNR--------LRDKHQIINANLKDTYETDPT---HAAAVYVL--DIGHEFLTPDGGVPYNLMPDYLHMNAKGYDIW 249          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12147.1815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JXU0_9PHAE1.040e-7895.16SGNH_hydro domain-containing protein n=2 Tax=Ectoc... [more]
D8LR16_ECTSI1.550e-6580.99Lipolytic enzyme, G-D-S-L n=1 Tax=Ectocarpus silic... [more]
A0A6H5JTL2_9PHAE7.240e-3879.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXS8_9PHAE1.740e-1884.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7C4EHB5_9BACT2.260e-830.84SGNH_hydro domain-containing protein n=1 Tax=Phyci... [more]
A0A7V3D6W6_9BACT2.940e-525.78GDSL family lipase n=1 Tax=Gemmataceae bacterium T... [more]
A0A0L0FWE1_9EUKA6.680e-527.19SGNH_hydro domain-containing protein n=1 Tax=Sphae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036514SGNH hydrolase superfamilyGENE3D3.40.50.1110coord: 1..123
e-value: 2.7E-12
score: 48.3
NoneNo IPR availablePANTHERPTHR11852:SF0PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB SUBUNIT BETA HOMOLOGcoord: 4..120
NoneNo IPR availablePANTHERPTHR11852PLATELET-ACTIVATING FACTOR ACETYLHYDROLASEcoord: 4..120
NoneNo IPR availableSUPERFAMILY52266SGNH hydrolasecoord: 2..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12147contigEcto-sp13_S_contig12147:1479..3760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12147.1815.1mRNA_Ecto-sp13_S_contig12147.1815.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12147 15..4921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12147.1815.1 ID=prot_Ecto-sp13_S_contig12147.1815.1|Name=mRNA_Ecto-sp13_S_contig12147.1815.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MDARDTVGGVKAVVQYVREQRPDAMVSVMALFPRADPKHKTSTTPWPVID
EVNRMLERMLRLKFGTKKVLFVNCSDRFVVEDDSGREVLNKEFILPDNLH
LTSDGLKAWAECAEAAVHSGLRDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036514SGNH_hydro_sf