prot_Ecto-sp13_S_contig7074.18153.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7074.18153.1
Unique Nameprot_Ecto-sp13_S_contig7074.18153.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length387
Homology
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: D7FT74_ECTSI (UBX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT74_ECTSI)

HSP 1 Score: 640 bits (1650), Expect = 1.570e-227
Identity = 346/405 (85.43%), Postives = 350/405 (86.42%), Query Frame = 0
Query:    1 MLFELTCTTSGTAPTAQQQREKAPELHGGTTTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLK-------------------VVQLRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATTSSRGSSPTQSLSXXXXXXXXXXXXXXXXXXXXXRDTSTTGLSPMDDSESDXXXDLDSDDEGSTAGGPKKPAFDLEKHRLAKFQQLPDEPPRDAEGVFTCQLRTTEGKFTRRFRFADALGVLLDFCEAQGGVPGQYRLVMPFPRRVLTRDDASAGTTLREAGLTSKQESVILERL 386
            MLFELTCTTSG APT+QQQ EKAP L GGT TTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISAN DPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGD+LSVWRRGKEFSLK                   VV+LRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAAT SSRGSSPTQSLS                     RDTSTTGLSPMDDSESD   DLDSDDE ST GGPKK AFDLEKHRLAKFQQLP+EPPRD EGVFTCQLRTTEGKFTRRFRFADALGVLLDFCEAQGGVPGQYRLVMPFPRRVLTRDDASAGTTL EAGLTSKQESVILERL
Sbjct:  117 MLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANDDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSLKSEDSHSPLTPEREPPLTMQVVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATISSRGSSPTQSLSPPPSGRGYAVGGKGSSVAAGGRDTSTTGLSPMDDSESDDDSDLDSDDERSTPGGPKKGAFDLEKHRLAKFQQLPEEPPRDEEGVFTCQLRTTEGKFTRRFRFADALGVLLDFCEAQGGVPGQYRLVMPFPRRVLTRDDASAGTTLHEAGLTSKQESVILERL 521          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: A0A7S3XVE0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVE0_HETAK)

HSP 1 Score: 130 bits (328), Expect = 3.640e-33
Identity = 71/141 (50.35%), Postives = 91/141 (64.54%), Query Frame = 0
Query:   36 TTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTD 176
            TTH GVLEF A+EG +GLP KV+ SL G A  Q                +N + +  A   +  V ++Y+RL KATFA++ PE  GLSQ+ E+RA+LEHNMRNHATL++GD L VW RGK F  +V++LRP    TVIDTD
Sbjct:   14 TTHCGVLEFTAEEGCVGLPPKVLASL-GIAPEQ----------------DNTQHQGVAPSSVGQVQIKYIRLEKATFAKIRPEKAGLSQIDEIRAVLEHNMRNHATLSLGDKLIVWFRGKAFECEVLELRPAAACTVIDTD 137          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: A0A4D9CT31_9STRA (UBX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT31_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.190e-28
Identity = 74/161 (45.96%), Postives = 97/161 (60.25%), Query Frame = 0
Query:   35 RTTHAGVLEFVADEGTIGLPRKVVLSLLGAA--AHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTDMEIELDLPEKAREQLQE 193
            R THAGVLEF A++G IGLP KV  SL+       +  SR   E +   G  E      PA      V V+YVRL K T+A+V P T  L  V EL+ MLE N++NHATL+ GD L VW RG+ F L+V  L P   VTVIDTD+ +++++PE+  E+ +E
Sbjct:  135 RVTHAGVLEFSAEDGRIGLPLKVRKSLVAEPEETREDGSRGMKERVEGPGGEEGDSRASPAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVTGLEPTQAVTVIDTDLTVDVEVPEEQTERERE 295          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: W7T6G4_9STRA (Ubiquitin fusion degradaton n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6G4_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.800e-28
Identity = 72/157 (45.86%), Postives = 95/157 (60.51%), Query Frame = 0
Query:   35 RTTHAGVLEFVADEGTIGLPRKVVLSLLGAA--AHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTDMEIELDLPEKARE 189
            R THAGVLEF A++G IGLP KV  SL        +  SR  ++ +   G  E    E  A      V V+YVRL K T+A+V P T  L  V EL+ MLE N++NHATL+ GD L VW RG+ F L+V+ L P   VTVIDTD+ +++++PE+  E
Sbjct:   23 RVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTE 179          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: I0YPZ2_COCSC (UBX domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPZ2_COCSC)

HSP 1 Score: 114 bits (285), Expect = 1.050e-24
Identity = 110/353 (31.16%), Postives = 153/353 (43.34%), Query Frame = 0
Query:   41 VLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQV--SELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTDMEIELDLPEKAREQL-QEKGAQDRAKTLRAHMGAATTSSRGSSPTQSLSXXXXXXXXXXXXXXXXXXXXXRDTSTTGLSPMDDSESDXXXDLDSDDEGSTAGGPKKPAFDLEKHRLAKFQQLPDEPPRDAEGVFTCQLRTTEG-KFTRRFRFADALGVLLDFCEAQGGV---PGQYRLVMPFPRRVLTRDDASAGTTLREAGLTSKQESVILERL 386
            VL F A EGTIG+P +V  +  G  A   P   +                         V V Y RL K  + R  P +    +    ++RA+LE  +  H+TL+ GD++SV   G  F L V +LRP   V+VIDT+ME E++   +  ++L QE+ A+  A   R    AA                                      +   L    ++E         + E +        A DLE+ R  K   LP EPP D E V +C +R   G +F+RRFR +D L  L DF +AQ G    PG YRLV  FPRRV+     +   TL + GL S+QE ++LE L
Sbjct:  117 VLAFTAAEGTIGMPPQVARNAFGDGASVSPEGAT-------------------------VDVLYRRLPKGEYVRFQPWSADFQREVGGDVRAVLEAALERHSTLSEGDWISVPFAGTAFDLTVQKLRPGRAVSVIDTEMEAEVEPSLETEQRLAQEEAARAEADRRREQELAAM-------------------------------------AQEALRQAAEAE---------EREKAEXXXXXXAAVDLERLRQEKAAALPPEPPAD-EAVTSCLIRLPNGARFSRRFRASDPLLHLFDFVDAQEGAGEGPGSYRLVAQFPRRVIGPHLPAPDATLADVGLASRQEVLLLEPL 397          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: A0A8J9WSW7_9CHLO (Probable ubiquitin recognition factor in ER-associated degradation n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WSW7_9CHLO)

HSP 1 Score: 109 bits (273), Expect = 6.290e-23
Identity = 126/378 (33.33%), Postives = 176/378 (46.56%), Query Frame = 0
Query:   17 QQQREKAP----ELHGGTTTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQV--SELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATTSSRGSSPTQSLSXXXXXXXXXXXXXXXXXXXXXRDTSTTGLSPMDDSESDXXXDLDSDDEGSTAGGPKKPAFDLEKHRLAKFQQLPDEPPRDAEGVFTCQLRTTEG-KFTRRFRFADALGVLLDFCEAQGGV---PGQYRLVMPFPRRVLTRDDASAGTTLREAGLTSKQESVILE 384
            +  R+ AP    +L    +T+  TTHAGVL F A EGT+G+P +V  ++ G  A              +   +NA            V V Y +L K  + R  P T    +    ++RA+LE  +  H+TL+ GD++SV   G+ F L V +LRP   V+VIDT+ME E++   +  ++L  + A  RA+  R H              Q L+   XXXXXXXXXXXXXXXXXX                                         E+ R  K   LP EP      V +C +R   G +F+RRFR +D L  L DF ++Q G    PG Y+LV  FPRRV+     +   TL + GL S+QE ++LE
Sbjct:  114 EMMRQDAPKNGAQLFEIASTSGSTTHAGVLAFTAAEGTVGMPPQVARNVFGDGA--------------SAPHDNA-----------TVDVLYRKLPKGEYVRFQPRTADFQKEVGPDVRAVLEAALERHSTLSEGDWISVPFAGRTFDLTVQKLRPGRAVSVIDTEMEAEVEPSLETEQRLAAEEAA-RAEAQRKH-------------EQELATMAXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------XERLRQEKAAALPPEPAAGEAAVTSCLIRLPNGARFSRRFRASDPLLHLFDFVDSQEGAGDGPGSYKLVAQFPRRVIGPHLPAPDATLADVGLASQQEVLLLE 421          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: A0A5J4XK30_9CHLO (UBX domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XK30_9CHLO)

HSP 1 Score: 103 bits (256), Expect = 1.180e-20
Identity = 106/387 (27.39%), Postives = 175/387 (45.22%), Query Frame = 0
Query:    9 TSGTAPTAQQQREKAPELHGGTTTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQV--SELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTDMEIELDLPEKAREQL--QEKGAQDRAKTLRAHMGAATTSSRGSSPTQSLSXXXXXXXXXXXXXXXXXXXXXRDTSTTGLSPMDDSESDXXXDLDSDDEGSTAGGPKKPAFDLEKHRLAKFQQLPDEPPRDAEG-VFTCQLRTTEG-KFTRRFRFADALGVLLDFCEAQG--GVP-GQYRLVMPFPRRVLTRDDASAGT-TLREAGLTSKQESVILER 385
            ++G A  +Q   +    L   +T+  R+ HAGVL+F A +GT+G+P  ++ +L G         T D     +                  V+V Y +L+K T+ R  P + G  +     +  +L+ +M  H+TLT G+++ V   G    LKV+ L+PEP V++I+TD+E E+D   +  ++L  +E+ AQ R +T++    A   S R +    +L                                                        ++   D ++ +L K   LP EP  +AE    +C  R  +G + +RRF  +    +L DF +A+G  G+P G YRLVM FPRRV+  D A   + ++ EAGL++ QE ++ ER
Sbjct:  110 SAGDALMSQDAPKNGAMLFELSTSAGRSLHAGVLDFSAAQGTVGVPEHLIRNLWGLT-------TGDGQCHGH------------------VIVTYRKLSKGTYVRFQPRSAGFQEEVGDGVEQVLQASMFTHSTLTQGEWVQVSYAGTLHDLKVLALKPEPAVSIIETDLEAEVDPSVETEDKLRAEEELAQQRLETMQR---AEEESIRRAMQDANLR-------------------------------------------------------EQAQADRQRMQLEKEALLPPEPSGNAEQPTVSCLFRMPDGTRASRRFFQSQPAQLLFDFADARGAGGLPFGGYRLVMQFPRRVV--DPAMIQSRSIAEAGLSAGQEVLLFER 411          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: A0A1Y1INF2_KLENI (Ubiquitin fusion degradation UFD1 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INF2_KLENI)

HSP 1 Score: 102 bits (255), Expect = 4.860e-20
Identity = 62/147 (42.18%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   37 THAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPE-TVGLSQVSELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTDMEIELD 182
            THAGVLEF ++EG +GLPR V   L G    ++     D                        VVV+YVRL+K T+A++ P      + V+  +A LE  +R HATLTVGD L V   G ++ L+VV+LRP PQVTVIDTDME++++
Sbjct:  163 THAGVLEFTSEEGFVGLPRHVANCLWGQDLGELGWEGRD------------------------VVVKYVRLSKGTYAKLQPAGNTEFADVANHKAALETALRTHATLTVGDVLVVRHGGVDYELRVVELRPAPQVTVIDTDMEVDIE 285          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: K3WWI9_GLOUD (UBX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWI9_GLOUD)

HSP 1 Score: 97.1 bits (240), Expect = 2.820e-18
Identity = 67/159 (42.14%), Postives = 92/159 (57.86%), Query Frame = 0
Query:   31 TTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDYLSVWRRGKE-FSLKVVQLRPEPQVTVIDTDMEIELDLPEKA 187
            T TTR THAGVLEFVA+EGT+GLP KV  SL               N+   G   N+  + P     E + V+Y+RL K  FA + P  VG  +   + + +LE +++ H TLTVGD L V R GKE F + V +L+PE  V +++TD+E+ L LP +A
Sbjct:  126 TQTTRKTHAGVLEFVAEEGTVGLPPKVAASLF-------------RNL---GGSSNSVGQVP-----EAIQVKYIRLEKGKFASLQPRGVGFGEREIDFKKILERSLKAHTTLTVGDVLFV-RHGKETFEVLVAELQPEAAVNILNTDLEVAL-LPSEA 261          
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Match: E1Z249_CHLVA (UBX domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z249_CHLVA)

HSP 1 Score: 95.5 bits (236), Expect = 6.320e-18
Identity = 122/393 (31.04%), Postives = 167/393 (42.49%), Query Frame = 0
Query:    9 TSGTAPTAQQQREKAPELHGGTTTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQV--SELRAMLEHNMRNHATLTVGDYLSVWRRGKEFSLKVVQLRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATTSSRGSSPTQSLSXXXXXXXXXXXXXXXXXXXXXRDTSTTGLSPMDDSESDXXXDLDSDDEGSTAGGPKKPAFDLEKHRLAKFQQLPDEP-PRDAEGVFTCQLRTTEG-KFTRRFRFADALGVLLDFCEAQGG---VPGQYRLVMPFPRRVLTRDDASAGT---------TLREAGLTSKQESVILER 385
            ++G +  +Q   +  P     T      THAG+LEF A EG + LPRKV+ SL G      P  T +  +                     + V Y RL K   A   P +    Q    ++R +LE  +  H+ LT GD+L+V   G+ + L++  L PE  V+VIDTD+E E++   +  E+++E   +  A T RA   A             L XXXXXXXXXXXXXXX      R                                        E  R AK   LP EP P  AE    C  R  +G + +RRF     L +L DF +++G    +PG+Y LV  +PRRV     A AG          TL  AGLT  +E + LE+
Sbjct:  112 SAGASLMSQDAYKNGPMFFQLTNAAGNRTHAGLLEFSAAEGFVALPRKVICSLWG------PDATEEHCVG-------------------RLRVAYRRLPKGERAVFQPRSASFQQEVGEDIRGVLEGALLQHSCLTRGDWLAVPHGGQRYDLRICDLHPEAAVSVIDTDLEAEINPSIETEERIRE---EYEAATRRAAEAA-------------LXXXXXXXXXXXXXXXXEEERLRR----------------------------------------EALRRAKEAALPAEPSPGAAEPCAACLFRFPDGSRHSRRFPLDSPLQLLFDFVDSKGASGMLPGRYSLVTQYPRRVFLPSLAEAGAEAAAAERQLTLHSAGLTGPREVLFLEQ 423          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7074.18153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT74_ECTSI1.570e-22785.43UBX domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3XVE0_HETAK3.640e-3350.35Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CT31_9STRA2.190e-2845.96UBX domain-containing protein n=1 Tax=Nannochlorop... [more]
W7T6G4_9STRA3.800e-2845.86Ubiquitin fusion degradaton n=1 Tax=Nannochloropsi... [more]
I0YPZ2_COCSC1.050e-2431.16UBX domain-containing protein n=1 Tax=Coccomyxa su... [more]
A0A8J9WSW7_9CHLO6.290e-2333.33Probable ubiquitin recognition factor in ER-associ... [more]
A0A5J4XK30_9CHLO1.180e-2027.39UBX domain-containing protein n=1 Tax=Trebouxia sp... [more]
A0A1Y1INF2_KLENI4.860e-2042.18Ubiquitin fusion degradation UFD1 family protein n... [more]
K3WWI9_GLOUD2.820e-1842.14UBX domain-containing protein n=1 Tax=Globisporang... [more]
E1Z249_CHLVA6.320e-1831.04UBX domain-containing protein n=1 Tax=Chlorella va... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001012UBX domainSMARTSM00166ubx_3coord: 301..385
e-value: 0.0093
score: 17.4
IPR001012UBX domainPFAMPF00789UBXcoord: 306..384
e-value: 5.6E-6
score: 26.5
IPR001012UBX domainPROSITEPS50033UBXcoord: 319..382
score: 9.108
IPR042299Ufd1-like, Nn domainGENE3D2.40.40.50coord: 1..71
e-value: 2.7E-5
score: 25.5
NoneNo IPR availableGENE3D3.10.20.90coord: 305..385
e-value: 4.2E-16
score: 60.7
NoneNo IPR availableGENE3D3.10.330.10coord: 109..182
e-value: 8.4E-16
score: 59.7
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 98..184
e-value: 8.0E-19
score: 67.8
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 1..220
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 294..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7074contigEcto-sp13_S_contig7074:4910..6760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7074.18153.1mRNA_Ecto-sp13_S_contig7074.18153.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7074 4407..7769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7074.18153.1 ID=prot_Ecto-sp13_S_contig7074.18153.1|Name=mRNA_Ecto-sp13_S_contig7074.18153.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=387bp
MLFELTCTTSGTAPTAQQQREKAPELHGGTTTTTRTTHAGVLEFVADEGT
IGLPRKVVLSLLGAAAHQVPSRTSDENISANGDPENAKAERPAVEGLENV
VVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDYLSV
WRRGKEFSLKVVQLRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRA
KTLRAHMGAATTSSRGSSPTQSLSPPPSGGGYVVGGKGSSVAAGGRDTST
TGLSPMDDSESDDDSDLDSDDEGSTAGGPKKPAFDLEKHRLAKFQQLPDE
PPRDAEGVFTCQLRTTEGKFTRRFRFADALGVLLDFCEAQGGVPGQYRLV
MPFPRRVLTRDDASAGTTLREAGLTSKQESVILERL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR042299Ufd1-like_Nn
IPR004854Ufd1-like
IPR029071Ubiquitin-like_domsf