prot_Ecto-sp13_S_contig707.18146.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig707.18146.1
Unique Nameprot_Ecto-sp13_S_contig707.18146.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length212
Homology
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: D8LPP7_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP7_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 8.510e-132
Identity = 193/200 (96.50%), Postives = 196/200 (98.00%), Query Frame = 0
Query:   12 AGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGSRVFGDDGQWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPGRQLFAVRCG 211
            AGAPVSKSLAI+TAVSTLVVLQNNSQDTAALIG RVFGDDGQWWRLLTSMFPLGSVWELILCL+IIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFP FRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVA LYWS+ SPLQSFRIPGRQLFAVRCG
Sbjct:    7 AGAPVSKSLAIITAVSTLVVLQNNSQDTAALIGVRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPVFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVAFLYWSNRSPLQSFRIPGRQLFAVRCG 206          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: A0A6H5L6R3_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R3_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 2.870e-131
Identity = 195/200 (97.50%), Postives = 198/200 (99.00%), Query Frame = 0
Query:   12 AGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGSRVFGDDGQWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPGRQLFAVRCG 211
            AGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIG RVFGDDGQWWRLLTSMFPLGSVWELILCL+IIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLT+GNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPGRQLFA+ CG
Sbjct:    7 AGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGIRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTVGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPGRQLFAI-CG 205          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: A0A2D4C2S4_PYTIN (UBA domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2S4_PYTIN)

HSP 1 Score: 74.7 bits (182), Expect = 2.440e-12
Identity = 55/192 (28.65%), Postives = 92/192 (47.92%), Query Frame = 0
Query:   13 GAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGSRVFGDDGQWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFF--RPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG 202
            GAPV+ + ++    ++   L  + +   +L+G       GQ+WRL +S             L II  FR+LER +GS KFGS +F    +S  ++LA  +  P    R P GP  +L A+ V +  ++P   P   +I  +  + K   Y  +  +  HD     +S   G+++ +L+ S  +PL   R+PG
Sbjct:   10 GAPVTYAASLAIGAASSATLLFDMEGPFSLLGRDAVVRRGQYWRLWSSQLAFHHGLAASFGLYIIFQFRVLERQMGSRKFGSLVFFIWTISALLKLAALLSMPSLARRXPPGPYALLGALTVFFMKFVPRLHPKAYSIVGINFSDKSSTYVLMAAILLHDP-RKLLSYIPGMLLGVLFSS--TPLSKLRLPG 198          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: G4ZVF7_PHYSP (UBA domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZVF7_PHYSP)

HSP 1 Score: 72.0 bits (175), Expect = 2.360e-11
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   53 QWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRP--PLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG 202
            Q+WRLL+S         + L L ++  FR+LER +GS KFGS L    L+S +++LA     P+     P G  P++ A  V +  +IP  +P  L++G +  + K   Y  +LV+   D Y++ +    G    LL+ S  +PL   R+P 
Sbjct:   49 QYWRLLSSQLTFHHGLAVSLGLYVVFQFRVLERQMGSRKFGSILVFTLLISGALQLAALTSAPWLAKMIPGGAYPVIGAFAVFFNRFIPKMSPRSLSVGGLHFSDKSSTYLLMLVILARD-YHALIPFLGGSFFGLLFSS--TPLGRLRLPS 197          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: V9F720_PHYPR (UBA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9F720_PHYPR)

HSP 1 Score: 69.3 bits (168), Expect = 2.280e-10
Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 0
Query:   53 QWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRP--PLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG 202
            Q+WRL++S         + L L  +  FR+LER LGS KFGS L    L+S +++LA     P+     P GP P++ A  V +  +IP   P   ++  +  + K   Y  +LVL   D +++ +    G  + LL+ S  SPL   R+P 
Sbjct:   67 QYWRLISSQLTFHHGLAVSLGLYAVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSAPWLTKTIPGGPYPVIGAFAVYFNKFIPKLHPRSFSVWGLHFSDKSSTYMLMLVLFVRD-FHALIPFFGGSFLGLLFSS--SPLGRLRLPS 215          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: A0A833T6G0_PHYIN (Putative DSC E3 ubiquitin ligase complex subunit 2 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T6G0_PHYIN)

HSP 1 Score: 66.6 bits (161), Expect = 1.790e-9
Identity = 48/152 (31.58%), Postives = 75/152 (49.34%), Query Frame = 0
Query:   53 QWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRP--PLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG 202
            Q+WRL++S         + L L  +  FR+LER LGS KFGS L    L+S +++LA     P+     P GP PI+ A  V +  +IP   P   ++  +  + K   Y  +LVL   D + + +    G  + LL+ S  +PL   ++P 
Sbjct:   49 QYWRLISSQLTFHHGLAVSLGLYTVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSSPWLAKTIPGGPYPIIGAFAVYFNKFIPKLHPRSFSVWGLHFSDKSSTYMLMLVLFVRD-FRALIPFMGGSFLGLLFRS--TPLGRLQLPS 197          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: D0NK77_PHYIT (UBA domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=D0NK77_PHYIT)

HSP 1 Score: 66.6 bits (161), Expect = 1.820e-9
Identity = 48/152 (31.58%), Postives = 75/152 (49.34%), Query Frame = 0
Query:   53 QWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRP--PLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG 202
            Q+WRL++S         + L L  +  FR+LER LGS KFGS L    L+S +++LA     P+     P GP PI+ A  V +  +IP   P   ++  +  + K   Y  +LVL   D + + +    G  + LL+ S  +PL   ++P 
Sbjct:   49 QYWRLISSQLTFHHGLAVSLGLYTVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSSPWLAKTIPGGPYPIIGAFAVYFNKFIPKLHPRSFSVWGLHFSDKSSTYMLMLVLFVRD-FRALIPFMGGSFLGLLFRS--TPLGRLQLPS 197          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: A0A3M6V8B5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8B5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.300e-9
Identity = 58/197 (29.44%), Postives = 93/197 (47.21%), Query Frame = 0
Query:   13 GAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGSRVFGDDGQWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALC-------VEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG 202
            GAPV+ + ++   V++   L  +     AL    V     Q+WRL +S         + L L ++  FR+LER LGS KFGS +    L+S +++L          VEF     P GP P+L A+ V +  YIP   P  +++  +  + K   Y  + VL   D + + +    G V+ +L+  H +PL   R+P 
Sbjct:  574 GAPVTYAYSLAVGVASSATLLLDRGHVLALDRDAVL-IRSQYWRLFSSQMTFQHGLAVSLGLYVVFQFRVLERQLGSRKFGSVVVFVMLISGALQLTALSSVSSSLVEFI----PGGPYPVLGALAVYFNRYIPKLQPRTVSVWGMHFSDKSSTYLLIFVLLACD-FRALIPFLGGSVLGMLF--HSTPLGRLRLPS 762          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: K3W5T0_GLOUD (UBA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5T0_GLOUD)

HSP 1 Score: 63.9 bits (154), Expect = 1.360e-8
Identity = 45/152 (29.61%), Postives = 74/152 (48.68%), Query Frame = 0
Query:   53 QWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFF--RPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG 202
            Q+WRLLT+         +   L ++  FR++ER +GS KFGS +     L+  +ELA  +  P    + P GP  +L A+ V +  YIP   P   +   +  + K   Y  ++V+   +  N+ +S   G +  LL+ S  +PL   R+P 
Sbjct:   34 QYWRLLTNQVTFHHGLAVSFGLYVMFQFRVIERQMGSRKFGSLVVFILSLTSGLELAALMSAPSLARQIPGGPYALLGALAVFFNKYIPKLYPRSFSFSGLNFSDKSSTYLLLIVMLGRNP-NTLLSFAPGALFGLLFSS--TPLARLRLPS 182          
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Match: A0A0W8DAG0_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DAG0_PHYNI)

HSP 1 Score: 60.8 bits (146), Expect = 2.490e-7
Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 0
Query:   53 QWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRP--PLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLV 165
            Q+WRL++S         + L L  +  FR+LER LGS KFGS L    L+S +++LA     P+     P GP P++ A  V +  +IP   P   ++  +  + K   Y  +LV
Sbjct:  285 QYWRLISSQLTFHHGLAVSLGLYAVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSAPWLTKTIPGGPYPVIGAFAVYFNKFIPKLHPRSFSVWGLHFSDKSSTYMLMLV 399          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig707.18146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LPP7_ECTSI8.510e-13296.50Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6R3_9PHAE2.870e-13197.50UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2D4C2S4_PYTIN2.440e-1228.65UBA domain-containing protein n=1 Tax=Pythium insi... [more]
G4ZVF7_PHYSP2.360e-1132.24UBA domain-containing protein n=4 Tax=Phytophthora... [more]
V9F720_PHYPR2.280e-1032.24UBA domain-containing protein n=8 Tax=Phytophthora... [more]
A0A833T6G0_PHYIN1.790e-931.58Putative DSC E3 ubiquitin ligase complex subunit 2... [more]
D0NK77_PHYIT1.820e-931.58UBA domain-containing protein n=3 Tax=Phytophthora... [more]
A0A3M6V8B5_9STRA2.300e-929.44Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
K3W5T0_GLOUD1.360e-829.61UBA domain-containing protein n=1 Tax=Globisporang... [more]
A0A0W8DAG0_PHYNI2.490e-733.04Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 10..187
e-value: 2.3E-7
score: 32.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 190..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..13
score: 0.519
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 20..189
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig707contigEcto-sp13_S_contig707:1273..2850 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig707.18146.1mRNA_Ecto-sp13_S_contig707.18146.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig707 321..2850 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig707.18146.1 ID=prot_Ecto-sp13_S_contig707.18146.1|Name=mRNA_Ecto-sp13_S_contig707.18146.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MLLFSIAADLVAGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGSRVFGD
DGQWWRLLTSMFPLGSVWELILCLSIIRVFRILERHLGSAKFGSFLFLAA
LLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGN
VRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRI
PGRQLFAVRCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf