prot_Ecto-sp13_S_contig7068.18145.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7068.18145.1
Unique Nameprot_Ecto-sp13_S_contig7068.18145.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7068.18145.1 vs. uniprot
Match: D7G7F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F4_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 1.420e-61
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 
Query:    1 MKKDVAKSATDLRKAFKQCENPYRRGVVSVEQFQAVCIKNGVTVDKEDIDFLLRLHRHKNGGGKYAIPPKWAQAPSPGAPRDTAKEGVRYDEFLRTCLLATSTEVPIVTTAS 112
            MKKDVAKSAT+LRKAFKQCENPYRRGVVSVEQFQAVC+KNGVTVDKEDIDFLLRLHRHKNGG KYAIPPKW +APSPGA RDTAKEGVRYDEFLRTCL ATSTEVPIVTT S
Sbjct: 1184 MKKDVAKSATNLRKAFKQCENPYRRGVVSVEQFQAVCLKNGVTVDKEDIDFLLRLHRHKNGGSKYAIPPKWTRAPSPGASRDTAKEGVRYDEFLRTCLSATSTEVPIVTTIS 1295
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BLAST of mRNA_Ecto-sp13_S_contig7068.18145.1 vs. uniprot
Match: A0A6H5JXC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC8_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 1.280e-59
Identity = 99/109 (90.83%), Postives = 102/109 (93.58%), Query Frame = 0 
Query:    4 DVAKSATDLRKAFKQCENPYRRGVVSVEQFQAVCIKNGVTVDKEDIDFLLRLHRHKNGGGKYAIPPKWAQAPSPGAPRDTAKEGVRYDEFLRTCLLATSTEVPIVTTAS 112
            DVAKSAT+LRKAFKQCENPYRRGVV VEQFQAVC+KNGVTVDKEDIDFLLRLHRHKNGG KYAIPPKW QAPSPG PRDT KEGVRYDEFLRTCL ATSTEVPI+ TAS
Sbjct:  772 DVAKSATELRKAFKQCENPYRRGVVGVEQFQAVCLKNGVTVDKEDIDFLLRLHRHKNGGSKYAIPPKWTQAPSPGDPRDTTKEGVRYDEFLRTCLSATSTEVPILMTAS 880
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BLAST of mRNA_Ecto-sp13_S_contig7068.18145.1 vs. uniprot
Match: A0A836C9J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9J2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.270e-7
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0 
Query:    1 MKKDVAKSATDLRKAFKQCENPYRRGVVSVEQFQAVCIKNGVTVDKEDIDFLLRLHRHKNGGGKYAIPPKWAQAPSPGAPRDTAKEGVRYDEFLRT 96
            M+ D+ +    L+   KQ E+PYRRGVVS + FQ +  K+G+ VD ED+  LL+ HRH+      +I    A     GA    A   ++Y++ LRT
Sbjct: 1322 MRADMLRVMGALKADLKQHESPYRRGVVSAQDFQRITHKHGLAVDAEDLQALLKAHRHR-AQAYGSISTVSAHKAGHGA---DAMPSLQYNDLLRT 1413
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7068.18145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7F4_ECTSI1.420e-6192.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXC8_9PHAE1.280e-5990.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C9J2_9STRA1.270e-737.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7068contigEcto-sp13_S_contig7068:5068..7209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7068.18145.1mRNA_Ecto-sp13_S_contig7068.18145.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7068 4482..7774 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7068.18145.1 ID=prot_Ecto-sp13_S_contig7068.18145.1|Name=mRNA_Ecto-sp13_S_contig7068.18145.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
MKKDVAKSATDLRKAFKQCENPYRRGVVSVEQFQAVCIKNGVTVDKEDID
FLLRLHRHKNGGGKYAIPPKWAQAPSPGAPRDTAKEGVRYDEFLRTCLLA
TSTEVPIVTTAS*
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