prot_Ecto-sp13_S_contig12142.1814.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12142.1814.1
Unique Nameprot_Ecto-sp13_S_contig12142.1814.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A6H5KHN1_9PHAE (Str_synth domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.270e-32
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEV 55
            GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVE+
Sbjct:  224 GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEL 278          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A835YS31_9STRA (Str_synth domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS31_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.350e-16
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEV 55
            G   ++DSSWK+ R +NR +I+D AP GRLLRFDP  G L T++CGLHF NGV +
Sbjct:  225 GTFLITDSSWKHARFNNRLEILDAAPRGRLLRFDPADGSLKTLLCGLHFANGVVI 279          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A7S2V5T4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5T4_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 8.490e-16
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    3 VFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEVS 56
            ++ +D+S+K  RA NR ++VDGAP GRLLR+  GSG +  V+CGLHFPNGV+VS
Sbjct:  138 IYFTDTSYKNTRALNRAEVVDGAPRGRLLRYSLGSGAVEVVVCGLHFPNGVQVS 191          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A7S2V6X8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6X8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.250e-15
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    3 VFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEVS 56
            ++ +D+S+K  RA NR ++VDGAP GRLLR+  GSG +  V+CGLHFPNGV+VS
Sbjct:  605 IYFTDTSYKNTRALNRAEVVDGAPRGRLLRYSLGSGAVEVVVCGLHFPNGVQVS 658          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A482SBF4_9ARCH (Str_synth domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBF4_9ARCH)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-14
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    3 VFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVE 54
            +F SDSS+ + R+ NR + +DGAP GRL R++  +  LH VMCGLHFPNGVE
Sbjct:   45 IFFSDSSYLHTRSENREEALDGAPRGRLFRYNLHTKQLHVVMCGLHFPNGVE 96          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A7S3XUQ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUQ6_HETAK)

HSP 1 Score: 74.7 bits (182), Expect = 2.450e-14
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    3 VFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEVS 56
            V+ +++S+K  R  NR ++VDGAP GRLL+ D G+G    +MCGLHFPNG+E S
Sbjct:  298 VYFTETSYKNSRVKNRAEVVDGAPRGRLLKHDLGTGQTEALMCGLHFPNGIEAS 351          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A7S3HRQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRQ2_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 5.670e-12
Identity = 27/54 (50.00%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVE 54
            G V  +DSS ++ R++NR +I+DGAP GRL ++DP +  +  ++CGLHFPNGV+
Sbjct:  215 GKVVFTDSSDRHTRSNNRPEILDGAPRGRLFQYDPVTQGVSLLLCGLHFPNGVQ 268          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: A0A3A9YY81_9ACTN (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Micromonospora endolithica TaxID=230091 RepID=A0A3A9YY81_9ACTN)

HSP 1 Score: 67.8 bits (164), Expect = 6.390e-12
Identity = 25/56 (44.64%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEVS 56
            G V+ +DSS+++P +H +RD+++  PNGR+L + PGSG    V  GL+FPNG+ ++
Sbjct:  146 GTVYFTDSSYRFPVSHWKRDLLEHRPNGRVLAYHPGSGRTEVVCAGLYFPNGIALT 201          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: UPI001C058939 (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Actinoplanes bogorensis TaxID=1610840 RepID=UPI001C058939)

HSP 1 Score: 67.8 bits (164), Expect = 6.410e-12
Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEVS 56
            G ++ SDSS ++P +H RRD+++  PNGR+L +DP SGD+  V  G +FPNGV ++
Sbjct:  147 GTIYFSDSSNRFPVSHWRRDLLEHRPNGRVLVYDPSSGDVDVVAEGFYFPNGVALT 202          
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Match: W1NL35_AMBTC (Str_synth domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NL35_AMBTC)

HSP 1 Score: 67.4 bits (163), Expect = 9.700e-12
Identity = 25/56 (44.64%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVEVS 56
            G ++ +D+S+KY   H+  DI +G P+GRLLRF+P +G+ H ++ GL+F NG+ +S
Sbjct:  170 GTIYFTDASYKYDLDHHMLDIFEGRPHGRLLRFEPSTGETHVLLKGLYFANGLALS 225          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12142.1814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHN1_9PHAE1.270e-3298.18Str_synth domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YS31_9STRA3.350e-1658.18Str_synth domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2V5T4_9STRA8.490e-1659.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2V6X8_9STRA1.250e-1559.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482SBF4_9ARCH1.200e-1457.69Str_synth domain-containing protein n=1 Tax=archae... [more]
A0A7S3XUQ6_HETAK2.450e-1453.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HRQ2_9STRA5.670e-1250.00Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A3A9YY81_9ACTN6.390e-1244.64SMP-30/gluconolactonase/LRE family protein n=1 Tax... [more]
UPI001C0589396.410e-1248.21SMP-30/gluconolactonase/LRE family protein n=1 Tax... [more]
W1NL35_AMBTC9.700e-1244.64Str_synth domain-containing protein n=1 Tax=Ambore... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 1..57
e-value: 1.7E-14
score: 55.4
IPR018119Strictosidine synthase, conserved regionPFAMPF03088Str_synthcoord: 1..57
e-value: 7.6E-11
score: 42.0
NoneNo IPR availablePANTHERPTHR10426STRICTOSIDINE SYNTHASE-RELATEDcoord: 1..57
NoneNo IPR availableSUPERFAMILY63829Calcium-dependent phosphotriesterasecoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12142contigEcto-sp13_S_contig12142:3992..5070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12142.1814.1mRNA_Ecto-sp13_S_contig12142.1814.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12142 3992..5070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12142.1814.1 ID=prot_Ecto-sp13_S_contig12142.1814.1|Name=mRNA_Ecto-sp13_S_contig12142.1814.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
GIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFP
NGVEVSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like
IPR018119Strictosidine_synth_cons-reg