prot_Ecto-sp13_S_contig70651.18140.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70651.18140.1
Unique Nameprot_Ecto-sp13_S_contig70651.18140.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.990e-42
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDSCLRDS 76
            MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS LRDS
Sbjct:   93 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDSGLRDS 168          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.340e-41
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDSCLRDS 76
            MFC+IYQLCR+RGAKAV RLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS LRDS
Sbjct:    1 MFCMIYQLCRLRGAKAVARLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDSSLRDS 76          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: D0NUW3_PHYIT (Tubulin-specific chaperone D, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NUW3_PHYIT)

HSP 1 Score: 109 bits (273), Expect = 3.130e-26
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS 71
            +F +IYQLC+VRG K VV+L+PHE +D EP +H LQ+QD  D+S WETRY LLLWLSML LVPFD++TIDS
Sbjct:  112 LFQIIYQLCKVRGYKTVVKLLPHEVSDFEPTLHLLQSQDRTDHSAWETRYVLLLWLSMLCLVPFDLNTIDS 182          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: A0A7S2WC38_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WC38_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.160e-25
Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    2 FCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS 71
            F  +Y LC+VRG KAVV+ +PHE A+LEP +  LQ QD+ D+STWETRY LLLWLSML L+PFD+DT+DS
Sbjct:  124 FTALYTLCKVRGYKAVVKQLPHEVAELEPTLLMLQCQDSKDHSTWETRYSLLLWLSMLVLIPFDLDTVDS 193          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: W2PE43_PHYPN (TFCD_C domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2PE43_PHYPN)

HSP 1 Score: 105 bits (263), Expect = 7.030e-25
Identity = 45/71 (63.38%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS 71
            +F ++YQLC+VRG K +V+L+PHE +D EP +  LQ+QD  D+S WETRY LLLWLSML LVPFD++TIDS
Sbjct:  119 LFQIVYQLCKVRGYKTIVKLLPHEVSDFEPTLQLLQSQDRTDHSAWETRYVLLLWLSMLCLVPFDLNTIDS 189          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: A0A5D6XM80_9STRA (TFCD_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM80_9STRA)

HSP 1 Score: 105 bits (263), Expect = 7.030e-25
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    4 VIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS 71
            ++Y LC+VRG K VV+L+PHEA+D EP +  LQ+QD  D+STWETRY LLLWLSML LVPFD++TIDS
Sbjct:  130 LVYHLCKVRGYKTVVKLLPHEASDFEPTLRLLQSQDRSDHSTWETRYVLLLWLSMLCLVPFDLNTIDS 197          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: A0A2R5GKZ4_9STRA (Tubulin-specific chaperone D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKZ4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 9.610e-25
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    5 IYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDSCL 73
            +Y LC+VRG KAVV+ +PHE ADLEP +  LQ QD  DY+TWETRY LLLWLSML L+PFD++T+DS L
Sbjct:  140 LYLLCKVRGYKAVVKQLPHEVADLEPTLWLLQCQDAKDYTTWETRYSLLLWLSMLVLIPFDLETVDSSL 208          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: A0A662Y9P7_9STRA (TFCD_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y9P7_9STRA)

HSP 1 Score: 105 bits (262), Expect = 9.610e-25
Identity = 46/71 (64.79%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS 71
            +F +IY LC+VRG K VV+L+PHE +D EP +  LQ+QD DD++ WETRY LLLWLSML LVPFD++TIDS
Sbjct:  275 LFQLIYHLCKVRGYKTVVKLLPHEVSDFEPTLQLLQSQDRDDHAAWETRYVLLLWLSMLCLVPFDLNTIDS 345          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: M4BSB0_HYAAE (TFCD_C domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BSB0_HYAAE)

HSP 1 Score: 105 bits (261), Expect = 1.310e-24
Identity = 45/71 (63.38%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS 71
            +F ++Y LC+VRG K VV+L+PHE +D EP +  LQ+QD  D+STWETRY LLLWLS+L LVPFD++TIDS
Sbjct:   42 LFQIVYHLCKVRGYKTVVKLLPHEVSDFEPTLELLQSQDRSDHSTWETRYVLLLWLSILCLVPFDLNTIDS 112          
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Match: A0A484DYP7_BRELC (TFCD_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYP7_BRELC)

HSP 1 Score: 105 bits (261), Expect = 1.310e-24
Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDS 71
            +F ++YQLC+VRG K VV+L+PHE +D EP +  LQ+QD  DYSTWE RY LLLWLSML LVPF + TIDS
Sbjct:  116 LFQIVYQLCKVRGYKTVVKLLPHEVSDFEPTVQLLQSQDRSDYSTWEMRYVLLLWLSMLCLVPFHLTTIDS 186          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70651.18140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX3_ECTSI1.990e-4298.68Tubulin folding cofactor D n=1 Tax=Ectocarpus sili... [more]
A0A6H5KH41_9PHAE2.340e-4194.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D0NUW3_PHYIT3.130e-2667.61Tubulin-specific chaperone D, putative n=2 Tax=Phy... [more]
A0A7S2WC38_9STRA5.160e-2565.71Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
W2PE43_PHYPN7.030e-2563.38TFCD_C domain-containing protein n=20 Tax=Phytopht... [more]
A0A5D6XM80_9STRA7.030e-2567.65TFCD_C domain-containing protein n=1 Tax=Pythium b... [more]
A0A2R5GKZ4_9STRA9.610e-2566.67Tubulin-specific chaperone D n=1 Tax=Hondaea ferme... [more]
A0A662Y9P7_9STRA9.610e-2564.79TFCD_C domain-containing protein n=2 Tax=Nothophyt... [more]
M4BSB0_HYAAE1.310e-2463.38TFCD_C domain-containing protein n=1 Tax=Hyalopero... [more]
A0A484DYP7_BRELC1.310e-2464.79TFCD_C domain-containing protein n=1 Tax=Bremia la... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033162Tubulin-folding cofactor DPANTHERPTHR12658BETA-TUBULIN COFACTOR Dcoord: 6..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70651contigEcto-sp13_S_contig70651:47..662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70651.18140.1mRNA_Ecto-sp13_S_contig70651.18140.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70651 17..662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70651.18140.1 ID=prot_Ecto-sp13_S_contig70651.18140.1|Name=mRNA_Ecto-sp13_S_contig70651.18140.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
MFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRY
GLLLWLSMLSLVPFDIDTIDSCLRDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033162TBCD