prot_Ecto-sp13_S_contig7065.18139.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7065.18139.1
Unique Nameprot_Ecto-sp13_S_contig7065.18139.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7065.18139.1 vs. uniprot
Match: D7G5T9_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T9_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.910e-11
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0 
Query:   65 MQFVLGKGTVAASACLALAYACLSARRATAFGLGLRPTP 103
            MQFVLGKGT AASACLALAYACLSARRA AFGLGLRP P
Sbjct:    1 MQFVLGKGTGAASACLALAYACLSARRADAFGLGLRPIP 39
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BLAST of mRNA_Ecto-sp13_S_contig7065.18139.1 vs. uniprot
Match: A0A6H5L0F2_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F2_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.010e-10
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0 
Query:   65 MQFVLGKGTVAASACLALAYACLSARRATAFGLGLRPTP 103
            MQFVL KG VAASACLALAYACLSAR+A AFGLGLRP P
Sbjct:    1 MQFVLDKGKVAASACLALAYACLSARQAYAFGLGLRPIP 39
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7065.18139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5T9_ECTSI1.910e-1192.31ABC transporter ATP-binding protein n=1 Tax=Ectoca... [more]
A0A6H5L0F2_9PHAE2.010e-1087.18ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 67..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7065contigEcto-sp13_S_contig7065:5812..7641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7065.18139.1mRNA_Ecto-sp13_S_contig7065.18139.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7065 5812..7641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7065.18139.1 ID=prot_Ecto-sp13_S_contig7065.18139.1|Name=mRNA_Ecto-sp13_S_contig7065.18139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
AGQHAAVRAPSVLRRQIQKEYLRAWHCTALHCRSWPLLHRRDLQQYLKAL
LLCYPTPGGDMRRQMQFVLGKGTVAASACLALAYACLSARRATAFGLGLR
PTP
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