mRNA_Ecto-sp13_S_contig706.18130.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig706.18130.1
Unique NamemRNA_Ecto-sp13_S_contig706.18130.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A6H5L7J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J2_9PHAE)

HSP 1 Score: 2046 bits (5300), Expect = 0.000e+0
Identity = 1255/1436 (87.40%), Postives = 1278/1436 (89.00%), Query Frame = 1
Query:   37 ATSVGELEEDTDGDVELSMVLRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITAAGQGLASGVKVSRVIRIHNRFLKNRFERCVREAKTPATSTTPSAAVNLAGTTPMTAIPPSVLIDKSPSPSQHEGGPSSSGCPPSPPPMSAVEPASTGGLSSGGRHQQLAGNEVSTGDSTREDGEGCRRGAGLSTEGKAWRSPLLSVPQELKKRDSDSDS------HPCGSPIRAAETAATAVDASFAGAADSGRSSSAASGDLLPISIPGGGSLSRAXXXXXXXXXXXXXXXXXXSSSPRSLEYLFYTEGRGRTARSREPSGGGDWSNSGGTGGAFDAGVSGGSAHDSWQPDLLKLAEDGFRLTDWSEANTSTYGNTATTEERSASEVRGGVTQLAGQPGTVGRHTAASASEVSHRCRREEEHAPCRAQSIVLSTHLCEADIPGRKAATPAVAAAAKRTSSDSVVFAPPASVGLGNEAFVPPVYRVLVVKVYTGRTRRLPPGSSAGCGEGGVWCSSATRRPPRLGVLREAWAKGYKSVCVSGEDGVSAGGXXXXXXXXXXXGSTKSAPSRYQ------EWHVLDGALALPEYIIE---------FDFSPEM--GKDGQAIKDGVRQRVNKWRHELAPSYRSSSLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASGGSDVLPFLIPLARLARQLEIDAASYATRYEAGISKALRMQPSAPALGIPPASNNDKGCGVGSGGCGDGGVSAAPGDRLEHLPACAVAPRPGHMLTRLSLHGQGVRTIEGLEACRNLKVLILSFNEISCLHGLAGLTHLRHLDLGYNIIEGVQHYGCATATKATPDADEDGDAVVAPDDYTAGSGATIVPNT-VARSSTGHERSRTSEETPRKAAVFKAAXXXXXXXXXXXXXXRGKDEGETGCASPATADISLPSLTRLDLNNNILHNLDDLK----ALWNIAPNLTVLDMRGNPLRAARTYRGAAV 4260
            AT VGELE+ TDGD+ELSM LRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETT GLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASE QRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGD E TVAGDDAAS+GLTATDAAV KG SGCPAT QSSN RKRKGAIASS SSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV      G ASGVKVSRVIRIHNRFLKNRFERCVREAK PATSTTPSAA N AGTTPMTAIPP+VL+DKSPSPSQHEGG SSSGCP SPP  SAV+P  T GLSS GRH QLAGNEVSTGDSTREDGE CRRGAGLSTEGKAWRSPLLSVPQE KKR S S S      HP  SPIRA ETAAT VDASFAGAADSGRSSSAASGDLLP SIPG       XXXXXXXXXXXXXXXXXXSSSPRSLEYLF+TEGRGRTARSREPSGGGDWSNSGG GGAFDAGV GGSAHDSWQPDLLKLAEDGFR+TDWSEA+  T GNTAT EE SA EVRGGV        TVGRHTAAS  +VSHRCRREEEHAPCRAQSIVLSTHLCEADIPGRKAATPA AAAA RTSSDSVVFAPPASVGLGNEAFVPPVYRVLVVKVYTGRTRRLPPGSSAGCGEGG  CSSATRRPPR GVLREAWA GYKSVCVSGEDGVSAGG XXX       G   SAPSR Q      E   +   + +   +++         F   P +   KDGQAIKDGVRQRVNKWRHELAPSYRSSSLASS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G +DVLPFLIPLARLARQLEIDAASYATRYEAGISKALRMQPSAPALGIPP SNN KGCGVG GGCG GGVSAAPGDRLEHL ACAV  RPGHMLTRLSLHGQGVRTIEGLEACRNLKVLILSFNEISCLHGLAGLTHLRHLDLGYNIIEGVQHY  AT TKATPDADEDGDA+VAPDD+T GSGATIVPNT VARS TG+ER RTSEETPRKAAVFKAA  XXXXX       RGKD+GETGCASPATADISLPSLTRLD NNNILHNLDDLK    ALWNIAPNLTVLDMRGNPLRAARTYRGAA+
Sbjct:   35 ATFVGELEKGTDGDMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTKGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNQLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEDTVAGDDAASEGLTATDAAVTKGSSGCPATAQSSNCRKRKGAIASSMSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV------GSASGVKVSRVIRIHNRFLKNRFERCVREAKAPATSTTPSAAENSAGTTPMTAIPPNVLVDKSPSPSQHEGGSSSSGCPSSPPQTSAVDPTPTCGLSSVGRHHQLAGNEVSTGDSTREDGEECRRGAGLSTEGKAWRSPLLSVPQEPKKRGSGSVSKSSPPCHPSESPIRADETAATGVDASFAGAADSGRSSSAASGDLLPSSIPGXXXXXXXXXXXXXXXXXXXXXXXXXSSSPRSLEYLFFTEGRGRTARSREPSGGGDWSNSGGAGGAFDAGVGGGSAHDSWQPDLLKLAEDGFRVTDWSEADICTAGNTATAEEPSAPEVRGGV--------TVGRHTAASGGDVSHRCRREEEHAPCRAQSIVLSTHLCEADIPGRKAATPAGAAAANRTSSDSVVFAPPASVGLGNEAFVPPVYRVLVVKVYTGRTRRLPPGSSAGCGEGGGGCSSATRRPPRPGVLREAWATGYKSVCVSGEDGVSAGGGXXXHAN----GEGGSAPSRCQAGKAGEEVMYISSCMVVASRVLKTPASLQKTMFSRPPPLLPPKDGQAIKDGVRQRVNKWRHELAPSYRSSSLASSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-ADVLPFLIPLARLARQLEIDAASYATRYEAGISKALRMQPSAPALGIPPGSNNGKGCGVGLGGCGGGGVSAAPGDRLEHLSACAVGARPGHMLTRLSLHGQGVRTIEGLEACRNLKVLILSFNEISCLHGLAGLTHLRHLDLGYNIIEGVQHYSGATTTKATPDADEDGDAIVAPDDHTGGSGATIVPNTAVARSDTGYERLRTSEETPRKAAVFKAAAAXXXXXRGDADGGRGKDKGETGCASPATADISLPSLTRLDFNNNILHNLDDLKVGGQALWNIAPNLTVLDMRGNPLRAARTYRGAAI 1451          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: D7FPT4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT4_ECTSI)

HSP 1 Score: 1915 bits (4961), Expect = 0.000e+0
Identity = 1188/1427 (83.25%), Postives = 1205/1427 (84.44%), Query Frame = 1
Query:   37 ATSVGELEEDTDGDVELSMVLRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITAAGQGLASGVKVSRVIRIHNRFLKNRFERCVREAKTPATSTTPSAAVNLAGTTPMTAIPPSVLIDKSPSPSQHEGGPSSSGCPPSPPPMSAVEPASTGGLSSGGRHQQLAGNEVSTGDSTREDGEGCRRGAGLSTEGKAWRSPLLSVPQELKKRDSDSDS------HPCGSPIRAAETAATAVDASFAGAADSGRSSSAASGDLLPISIPGGGSLSRAXXXXXXXXXXXXXXXXXXSSSPRSLEYLFYTEGRGRTARSREPSGGGDWSNSGGTGG------AFDAGVSGGSAHDSWQPDLLKLAEDGFRLTDWSEANTSTYGNTATTEERSASEVRGGVTQLAGQPGTVGRHTAASASEVSHRCRREEEHAPCRAQSIVLSTHLCEADIPGRKAATPAVAAAAKRTSSDSVVFAPPASVGLGNEAFVPPVYRVLVVKVYTGRTRRLPPGSSAGCGEGGVWCSSATRRPPRLGVLREAWAKGYKSVCVSGEDGVSAGGXXXXXXXXXXXGSTKSAPSRYQEWHVLDGALALPEYIIEFDFSPEMGKDGQAIKDGVRQRVNKWRHELAPSYRSSSLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RASGGSDVLPFLIPLARLARQLEIDAASYATRYEAGISKALRMQPSAPALGIPPASNNDKGCGVGSGGCGDGGVSAAPGDRLEHLPACAVAPRPGHMLTRLSLHGQGVRTIEGLEACRNLKVLILSFNEISCLHGLAGLTHLRHLDLGYNIIEGVQHYGCATATKATPDADEDGDAVVAPDDYTAGSGATIVPNTVARSSTGHERSRTSEETPRKAAVFK-AAXXXXXXXXXXXXXXRGKDEGETGCASPATADISLPSLTRLDLNNNILHNLDDLKALWNIAPNLTVLDMRGNPLRAARTYRGAAVRYGVP 4275
            ATSVG+LEE+TDG +ELSM LRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLR+LGCLSYFGGLTA+CFINVPNLTSVSGLD CCPGLESLNITECGLETT GLEGLT XXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA         TELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGD EAT+AGDDAAS+GLTATDAAV KG SGCPAT QS+NSRKRKGAIASS SSPS PGSTKRSTSRATAA EPEGLEVLQLIAKGQALSSAV VVEGVLHKMEEQ     LGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV                                                                                           SAVE ASTGGLSSGGR QQLAG+EVSTGD  REDGE CRRGAGLSTEGKAWRSPLLSVPQELKKR S SDS       PC SP RAAETAAT VDASF  A DSGRSSS ASGDLL  SIPGGGSLSRA           XXXXXXX  SPRSLEYLF+TEGRGRTARSREPSGGGDWSN            AFDAGV GGSAHDSWQPDLLKLAEDGFRLTDWSEA+T+T GNTATTEE SA  VRGGVTQLA QPGTVGRHTAASA EVSHRCRREEEHAPCRAQS+VLSTHLCEADIPGRKAATPA AAAA  TSSDSVVFAPPASVGLGNEAFVPPVYRVLVVKVYTGRTRRLPPGSSAGCGEGG  CSS TRRPPR GVLREAWA GYKSVCVSGEDGVSAGGXXXXXXXXXXX S+KSAPSRYQEWHVLDGALALPEYIIEFDFSPEMGKDGQAIKDGVRQRVNKWRHELAPSYRSSSLAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RASGG+DVLPFLIPLARLARQLEIDAASYATRYEAGISKALRMQPSAPALGIPP S+N KGCGVGSGGCG  GVSAAPGDRLEHL ACAVA RPGHMLTRLSLHGQGVRTIEGLEAC NLKVLILSFNEISCLHGLAGLTHLRHLDLGYNIIEGVQHY  ATATKAT       DAVVAPDDYT GSGATIVPN VAR ST HERSRTSEETPRKAAVFK AA XXXXXXX      RGKDEGET CASPATADISLPSLTRLDLNNNILHNLDDLKALWNIAPNLTVLDMRGNPLRAARTYRGAAVR G+P
Sbjct:    3 ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRDLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA---------TELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSANSRKRKGAIASSMSSPSMPGSTKRSTSRATAATEPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQ-----LGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV------------------------------------------------------------------------------------------TSAVEHASTGGLSSGGRQQQLAGSEVSTGDGAREDGEECRRGAGLSTEGKAWRSPLLSVPQELKKRGSGSDSKSSPPCRPCESPSRAAETAATTVDASFVSAPDSGRSSSTASGDLLTSSIPGGGSLSRAAAEGRGKKSDKXXXXXXXXXSPRSLEYLFFTEGRGRTARSREPSGGGDWSNXXXXXXXXXXXXAFDAGVGGGSAHDSWQPDLLKLAEDGFRLTDWSEADTNTAGNTATTEEPSAPGVRGGVTQLASQPGTVGRHTAASAGEVSHRCRREEEHAPCRAQSVVLSTHLCEADIPGRKAATPAGAAAANSTSSDSVVFAPPASVGLGNEAFVPPVYRVLVVKVYTGRTRRLPPGSSAGCGEGGGGCSSTTRRPPRPGVLREAWATGYKSVCVSGEDGVSAGGXXXXXXXXXXXXSSKSAPSRYQEWHVLDGALALPEYIIEFDFSPEMGKDGQAIKDGVRQRVNKWRHELAPSYRSSSLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRASGGADVLPFLIPLARLARQLEIDAASYATRYEAGISKALRMQPSAPALGIPPGSSNGKGCGVGSGGCGGSGVSAAPGDRLEHLSACAVAARPGHMLTRLSLHGQGVRTIEGLEACHNLKVLILSFNEISCLHGLAGLTHLRHLDLGYNIIEGVQHYSGATATKAT-------DAVVAPDDYTGGSGATIVPNIVARGSTEHERSRTSEETPRKAAVFKEAAAXXXXXXXGDAGGGRGKDEGETVCASPATADISLPSLTRLDLNNNILHNLDDLKALWNIAPNLTVLDMRGNPLRAARTYRGAAVR-GIP 1317          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A7S1C613_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C613_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.010e-44
Identity = 200/530 (37.74%), Postives = 278/530 (52.45%), Query Frame = 1
Query:  121 DAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQ---ARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITAAGQGLA-SGVKVSRVIRIHNRFLKNRFERCVREAKTPATSTTPSAAVNLAG 1698
            D  ++E+C A+G+++    R+ H +  +DLF     E+  L YF  L  +  I +P +  + GL+ C P +E L ++EC L T         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +T IG  L     L  +NLA N +G FKE+  LA +  LR L   + HFGDNPVC L NY+TYV Y L  + +LD   ++E+SK  A   ++KK MYYNMR + +KR+  +VIR+A+E  + R            +  +   L  Q++ VE+ L   +   + G                      AAV     GC     ++++R                              + E LE  QL  K +AL  A       + ++++Q    + R LG+ ++ V R        +++E  TGGN+R E+G+  DVWF+SC DL+ SR        L  +GVKV RV R+HNRFL+NRF++ +    T    T PS +V  +G
Sbjct:    7 DDSLKELCTASGVSDTTLHRKPHTVEYVDLFQCHQVEMRSLQYFRNLREVILIQLPRVDVIEGLEWC-PLIERLWVSECNLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNSITAIGTALDRNTCLTSLNLADNGIGYFKEIHNLARVPSLRHLCFSEPHFGDNPVCNLCNYQTYVLYQLPHVDTLDTVALAEDSKQLAEATYIKKKMYYNMRIKTLKRNTTNVIRRATEALQGR---------VGQINLSFNVLLRQKRDVERLLDEHKWTAEHGR---------------------AAV-----GCLDDADAASAR------------------------------DDEFLE--QLRVKAEALEEATMAKTAEVTRIDQQFTRLKERLLGISEQNVTR--------MIVELGTGGNIRLEDGKASDVWFTSCVDLLHSRFFHRDFLPLGVNGVKVHRVTRVHNRFLRNRFDQRMSHLMT----TIPSLSVGASG 456          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A5D6YI89_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YI89_9STRA)

HSP 1 Score: 176 bits (447), Expect = 4.270e-41
Identity = 196/503 (38.97%), Postives = 268/503 (53.28%), Query Frame = 1
Query:  130 VREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQ-RARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKME-EQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITAAGQGL-ASGVKVSRVIRIHNRFLKNRFE 1629
            ++E+C  NGL+ + F R    + +LD+F+   R + C+ +F  L  +  ++ P +T++ GL A CP LE L +TECGLE T G+E    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +   L    +L ++NLA N+L  FK LL L  LE L SL L D H+GDNPVC L NY+TY+ +HL++LT LD   +S  +K  A    +KK MYYNMR + +KR     I+ +   + +A   TEL          +L  L  ++K +E R +A  A     NGD+ A V                       C A+                                            L+L  K + +   +      +++M  E  R+R        +       ++ L+LE +TGGN+R E+G+P D WF+SC DLV+SR+  A    L    + +SRV RI NR+L++RF+
Sbjct:   44 LKELCRDNGLSASQFARRGAAVATLDMFLGFWRSMKCVMHFPALRELSIVHHPTITALEGL-AHCPNLEQLCVTECGLERTSGMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLESALSCCASLTDLNLADNRLCNFKSLLSLTSLERLTSLALSDPHYGDNPVCRLCNYQTYIMFHLSRLTCLDTVELSTRNKQIAEATMIKKKMYYNMRIKAIKRDTRARIKHSESVRSQAEQQTEL----------SLAPLVREKKEIE-RYVADLAVRFETNGDSGAAVFD---------------------CQAS--------------------------------------------LELKKKLECIDDCLASKYSAIYRMNYEFNRLRASLQSTSDIN------IARLLLELETGGNIRLEDGKPSDAWFASCVDLVRSRLFPAELHALNIQDICISRVTRISNRYLRHRFQ 463          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A3R6VPJ0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VPJ0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 5.470e-37
Identity = 199/532 (37.41%), Postives = 260/532 (48.87%), Query Frame = 1
Query:   52 ELEEDTDGDVELSMVLRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEE--QARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV----ITAAGQGLASGVKVSRVIRIHNRFLKNRFE 1629
            E + D D    LS   RL  F     + E C ANGL    F R    + S+++F+     +  + YFG L  +  +  P +T + GL++C P LE+L I ECGL           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  +  GL   + L E+NLA N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA    R+ FA  L     AN    L  L  +   +E+ L A RA+                                                                             P G     L+ K   +S  +     V+H M     A +  L +  E       + V  L+LE +TGGN+R E+G   DVW++SC DL+KSR     ++  G      +KV RV RI+NRFL+NRF+
Sbjct:   34 EQDVDDDDPTSLSNNDRLEWFDASPDLEECCTANGLTRKQFARRGDRVTSIEMFLGFWESMKSVQYFGMLQQLSIVKHPTITVIEGLESC-PLLENLRIIECGLTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIETLETGLDANKALEEINLAANKLSSFQMLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALAYLDSIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA----RSCFADNL---NYANF--NLNALMRELSDLEKELQAERASSFQ------------------------------------------------------------------------LYPPG----SLVTKRDCISQYIQQKMRVVHAMTSAYDALVTKLALLSE-------KTVRRLVLELNTGGNIRVEDGTAADVWYTSCVDLLKSRAFVHDLSIFG---VKELKVLRVARINNRFLRNRFQ 469          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A7S0QTT4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTT4_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 1.010e-35
Identity = 113/363 (31.13%), Postives = 164/363 (45.18%), Query Frame = 1
Query:  559 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITAAGQGLA-SGVKVSRVIRIHNRFLKNRFERCVRE 1644
            +  +G+ L    +L E+N+A NQ+  FK+LL L     LR L   D  +GDNPVC L NY+TYV +HL QL  LD   + EE K  A   ++KK MYYNMR + +KR+A ++IRKA+E          C  K    Q+  + L+ Q K +E+ + A R   D G+                                     + + K + A+A                            +   LIA G+                        L   +E V    +   S L++E +TGGN+R E+G+P DVW+SSC +L++SR        L  +G++V+RV RIHNRFL+NRFE  + E
Sbjct:  136 IRNLGNDLDNCVSLVELNIAGNQMWSFKDLLNLTRASSLRRLAFSDCDYGDNPVCDLCNYQTYVYFHLPQLQFLDTLPIPEEGKILAEATYMKKKMYYNMRIKTLKRNASNIIRKATE--------AFCKRKEQLFQSLNVLLRLQ-KDLERAIWADR---DQGS----------------------------------AYQAKAHKVRDAVA----------------------------QCWSLIATGEG----------------------QLDTLRECVCGLAEHNASRLIVELETGGNIRLEDGKPSDVWYSSCVELIQSRFFAKDFAALGITGLQVTRVTRIHNRFLRNRFEEKLEE 402          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A3L6V454_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V454_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.490e-35
Identity = 194/513 (37.82%), Postives = 254/513 (49.51%), Query Frame = 1
Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEE--QARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITAAGQGLA-SGVKVSRVIRIHNRFLKNRFE 1629
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL+ CCP LESL I ECGL           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA    RA F T+       NL   +  L    K +    +   AA                                      T+ S                P+ P +                     L  K   ++  +     VLH M     + + TL +  E       + +  L+LE +TGGN+R E+G   DVW++SC DLVKSR   A         V V RV RI+NR+L+NRF+
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGLE-CCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA----RACF-TDHVHYTNFNLNALMRELSDLEKELHLETLPPSAA--------------------------------------TLSSL---------------PNLPNNA--------------------LAIKRDCIAQYIKEKMTVLHSMTAAFHSLVATLALLSE-------KTIRRLVLELNTGGNIRLEDGTSADVWYTSCVDLVKSRAFVADLHVFGVRDVHVLRVARINNRYLRNRFQ 474          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A024UIV4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIV4_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.990e-35
Identity = 199/532 (37.41%), Postives = 260/532 (48.87%), Query Frame = 1
Query:   52 ELEEDTDGDVELSMVLRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEE--QARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRV----ITAAGQGLASGVKVSRVIRIHNRFLKNRFE 1629
            E + D D    LS   RL  F     + E C ANGL    F R    + S+++F+     +  + YFG L  +  +  P +T + GL++C P LE+L I ECGL           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  +  GL   + L E+NLA N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA    R+ FA  L     AN    L  L  +   +E+ L A RA+                                                                             P G     L+ K   +S  +     V+H M     A +  L +  E       + V  L+LE +TGGN+R E+G   DVW++SC DL+KSR     ++  G      +KV RV RI+NRFL+NRF+
Sbjct:   34 EQDVDDDDPTSLSNNDRLEWFDASPDLEECCTANGLTRKQFARRGDRVTSIEMFLGFWESMKSVQYFGMLQQLSIVKHPTITVIEGLESC-PLLENLRIIECGLTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIETLETGLDANKALEEINLAANKLSSFQMLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALAYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA----RSCFADNL---NYANF--NLNALMRELSDLEKELQAERASSFQ------------------------------------------------------------------------LYPPG----SLVTKRDCISQYIQQKMRVVHAMTSAYDALVTKLALLSE-------KTVRRLVLELNTGGNIRVEDGTAADVWYTSCVDLLKSRAFVHDLSIFG---VKELKVLRVARINNRFLRNRFQ 469          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A8K1CNS6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNS6_PYTOL)

HSP 1 Score: 159 bits (402), Expect = 2.040e-35
Identity = 201/538 (37.36%), Postives = 273/538 (50.74%), Query Frame = 1
Query:   16 RSMHSSGATSVGELEEDTDGDVELSMVLRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTGGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITAAGQGLA-SGVKVSRVIRIHNRFLKNRF 1626
            RS H S  +S G     T+G+  +    R++ F   A ++E+C  NG+  + F + +  + SLD+F+     +  + YF  L  +     P +  + GL +C   LE+L+ITEC LE          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   I   L    +L E+N+A N++  FK LL LA L+ L  LTL D HFGDNPVC L NY+TY+   L +L  LD   +S  +K  A    +KK MYYNMR + +KR     IR A E  R+  A  L G    N++  L H    +K +E+ L+   A+ +                                                                 S+S A+  A+           K Q + + +      + +M ++    TL    +  G     +VS L+LE +TGGN+R E+G+P D W+SSC DLV+SR+  A  +    S V+V+RV RI+NR L+NRF
Sbjct:   30 RSSHESELSSDGP---HTNGETSMQQRERVQLFETSADLQELCRDNGITSSQFAKRAQFVTSLDMFLGFWPSMLTVMYFPALRELSITKHPTIAKMEGLTSCL-NLETLSITECELERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIDSALNGCTSLTELNIADNRVSSFKSLLGLANLDQLAVLTLSDPHFGDNPVCRLCNYQTYLMCQLGRLYWLDTFELSTRNKQIAEATMVKKKMYYNMRIKTIKRQVQLRIRHA-EVVRSHTAQHLEG----NIEALLTH----KKEIEKFLLDTAASPE-----------------------------------------------------------------SSSHASNFAD-----------KLQRIEACLQKKSAAIFRMNQE--FETLRARMQRTGDT---SVSRLLLELETGGNIRLEDGKPTDPWYSSCVDLVRSRLFPADLRAFGISDVQVNRVTRINNRHLRNRF 473          
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Match: A0A7S0V6C4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V6C4_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 6.830e-35
Identity = 121/366 (33.06%), Postives = 167/366 (45.63%), Query Frame = 1
Query:  559 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIASSTSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVT-------VVEGVLHKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDVWFSSCADLVKSRVITA--AGQGLASGVKVSRVIRIHNRFLKNRFE 1629
            + EIG  L    ++ E+NLA NQL  FK+LL L     LR L+  D  +GDNPVC L NY+TYV +HL QL+ +D   + EE K  A   ++KK MYYNMR + +KR+  +++RK  E  ++R      G  A      LI    Q+K +E++L       D+                      DAA  +GG+                                               E  QL  K + L++A T         EG+L +M+EQ            V        S L++E +TGGN+R E+G+P DVW+SSC DLV SR         G+A  ++V RV RIHNRFL+NRFE
Sbjct:  154 IREIGSSLDHNSSMLELNLAGNQLWSFKDLLNLTRCASLRKLSFNDPDYGDNPVCELCNYQTYVFFHLQQLSHMDTMPIPEEGKHLAEATYMKKKMYYNMRIKTLKRNTTNILRKGREALQSRKGHTTQGLNA------LIR---QQKEIERKL-------DM----------------------DAAEGRGGAD----------------------------------------------EEKQLRNKMETLATAATSKMAEISAAEGMLDEMKEQ------------VCSISDYNTSRLIVELETGGNIRLEDGKPTDVWYSSCVDLVNSRFFQNDFTSYGIAD-LRVVRVTRIHNRFLRNRFE 422          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig706.18130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7J2_9PHAE0.000e+087.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPT4_ECTSI0.000e+083.25Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A7S1C613_9STRA2.010e-4437.74Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5D6YI89_9STRA4.270e-4138.97Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3R6VPJ0_9STRA5.470e-3737.41Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7S0QTT4_9CRYP1.010e-3531.13Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A3L6V454_9STRA1.490e-3537.82Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A024UIV4_9STRA1.990e-3537.41Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A8K1CNS6_PYTOL2.040e-3537.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0V6C4_9CRYP6.830e-3533.06Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig706contigEcto-sp13_S_contig706:3..9596 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1940.2
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FPT4
Model size4275
Hectar predicted targeting categoryother localisation
Exons14
EggNOG free text desc.axoneme assembly
EggNOG OGsCOG4886@1,KOG0531@2759
Cds size4275
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463968.3572922-CDS-Ecto-sp13_S_contig706:2..1071681463968.3572922-CDS-Ecto-sp13_S_contig706:2..107Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 3..107 -
1681463968.3742294-CDS-Ecto-sp13_S_contig706:499..9581681463968.3742294-CDS-Ecto-sp13_S_contig706:499..958Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 500..958 -
1681463968.3881574-CDS-Ecto-sp13_S_contig706:1277..15511681463968.3881574-CDS-Ecto-sp13_S_contig706:1277..1551Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 1278..1551 -
1681463968.397251-CDS-Ecto-sp13_S_contig706:2173..24661681463968.397251-CDS-Ecto-sp13_S_contig706:2173..2466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 2174..2466 -
1681463968.4060988-CDS-Ecto-sp13_S_contig706:2631..27091681463968.4060988-CDS-Ecto-sp13_S_contig706:2631..2709Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 2632..2709 -
1681463968.4150014-CDS-Ecto-sp13_S_contig706:3068..45951681463968.4150014-CDS-Ecto-sp13_S_contig706:3068..4595Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 3069..4595 -
1681463968.4240878-CDS-Ecto-sp13_S_contig706:4845..50011681463968.4240878-CDS-Ecto-sp13_S_contig706:4845..5001Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 4846..5001 -
1681463968.4375272-CDS-Ecto-sp13_S_contig706:5394..58471681463968.4375272-CDS-Ecto-sp13_S_contig706:5394..5847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 5395..5847 -
1681463968.4485977-CDS-Ecto-sp13_S_contig706:6285..64471681463968.4485977-CDS-Ecto-sp13_S_contig706:6285..6447Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 6286..6447 -
1681463968.459808-CDS-Ecto-sp13_S_contig706:6685..69521681463968.459808-CDS-Ecto-sp13_S_contig706:6685..6952Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 6686..6952 -
1681463968.4707844-CDS-Ecto-sp13_S_contig706:7337..75101681463968.4707844-CDS-Ecto-sp13_S_contig706:7337..7510Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 7338..7510 -
1681463968.4814062-CDS-Ecto-sp13_S_contig706:7767..79791681463968.4814062-CDS-Ecto-sp13_S_contig706:7767..7979Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 7768..7979 -
1681463968.4924598-CDS-Ecto-sp13_S_contig706:8371..84521681463968.4924598-CDS-Ecto-sp13_S_contig706:8371..8452Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 8372..8452 -
1681463968.5068336-CDS-Ecto-sp13_S_contig706:9561..95961681463968.5068336-CDS-Ecto-sp13_S_contig706:9561..9596Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig706 9562..9596 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig706.18130.1prot_Ecto-sp13_S_contig706.18130.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig706 3..9596 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig706.18130.1

>prot_Ecto-sp13_S_contig706.18130.1 ID=prot_Ecto-sp13_S_contig706.18130.1|Name=mRNA_Ecto-sp13_S_contig706.18130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1425bp
MKKTRRSMHSSGATSVGELEEDTDGDVELSMVLRLRAFREDAGVREICEA
NGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTS
VSGLDACCPGLESLNITECGLETTGGLEGLTGLTALHLSSNHLQSLAGVG
GMTRLKKLWANDNRIKSMDGLSSLGALEDLWLCRNRLTEIGDGLPLGRTL
REVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYV
AYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIR
KASEYQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLG
NGDAEATVAGDDAASDGLTATDAAVIKGGSGCPATVQSSNSRKRKGAIAS
STSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVL
HKMEEQARIRTLGVFKEVVGRACKRAVSELMLEFDTGGNVRFEEGRPGDV
WFSSCADLVKSRVITAAGQGLASGVKVSRVIRIHNRFLKNRFERCVREAK
TPATSTTPSAAVNLAGTTPMTAIPPSVLIDKSPSPSQHEGGPSSSGCPPS
PPPMSAVEPASTGGLSSGGRHQQLAGNEVSTGDSTREDGEGCRRGAGLST
EGKAWRSPLLSVPQELKKRDSDSDSHPCGSPIRAAETAATAVDASFAGAA
DSGRSSSAASGDLLPISIPGGGSLSRAAAEGGGKKSDKRSSSSSPSSSPR
SLEYLFYTEGRGRTARSREPSGGGDWSNSGGTGGAFDAGVSGGSAHDSWQ
PDLLKLAEDGFRLTDWSEANTSTYGNTATTEERSASEVRGGVTQLAGQPG
TVGRHTAASASEVSHRCRREEEHAPCRAQSIVLSTHLCEADIPGRKAATP
AVAAAAKRTSSDSVVFAPPASVGLGNEAFVPPVYRVLVVKVYTGRTRRLP
PGSSAGCGEGGVWCSSATRRPPRLGVLREAWAKGYKSVCVSGEDGVSAGG
GGGGHANGEGGGSTKSAPSRYQEWHVLDGALALPEYIIEFDFSPEMGKDG
QAIKDGVRQRVNKWRHELAPSYRSSSLASSPSSSSSCPPASTSSKSSTAK
ATGSGGGSSSGSSGRASGGSDVLPFLIPLARLARQLEIDAASYATRYEAG
ISKALRMQPSAPALGIPPASNNDKGCGVGSGGCGDGGVSAAPGDRLEHLP
ACAVAPRPGHMLTRLSLHGQGVRTIEGLEACRNLKVLILSFNEISCLHGL
AGLTHLRHLDLGYNIIEGVQHYGCATATKATPDADEDGDAVVAPDDYTAG
SGATIVPNTVARSSTGHERSRTSEETPRKAAVFKAAAASASAARGDAGGG
RGKDEGETGCASPATADISLPSLTRLDLNNNILHNLDDLKALWNIAPNLT
VLDMRGNPLRAARTYRGAAVRYGVP
back to top

mRNA from alignment at Ecto-sp13_S_contig706:3..9596-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig706.18130.1 ID=mRNA_Ecto-sp13_S_contig706.18130.1|Name=mRNA_Ecto-sp13_S_contig706.18130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig706:3..9596- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGAAAACAAGACGATCTATGCATAGCTCAGGGTAAGCAGTTGTGGT GATGGACTGCTACGGACTGCTGCTGTGCGTGGTACCACTCTGTCCCACAT CAGAGGTCAACAGTACTACTACTGCTGTGCATGCCTATACTGGATGCGGG TGACAGGGGTATCGCTGACGTTCATGCAGGTGTCAGGTACTCAGGTGCTG AGCTACCGCAGTCCGCGTTTTAGTCTACTGCTCTGCAGCTGTGAACCGAT TTCTGCGTACCAATAGGAGACGCATGCAGGTATTTTCCTACTGTATGCTC CAAGAAGAGGAGATTCTGCCGTCGACGCTAGCTTGCAGTTTGACGCGTAC GATGTAGATGCTACCGCAGTGGATAATTACTCGATTGAGGAGGGGTCGTT TGGTGGGTACTCGCCCTTTTTGGGGTTGATGACGCAACGTTGTTGGCGGA TGCACGCATGTGTTTTGGAATGGGGGGTGCACGTACTTCGTGTTTTTCTG CTGGCGTCTTCATCTCCGTCTCTGCCCGCGCCCCGGCGTCGTGTACTTCA ACGCACATTCCGGGGGTAGAAGGTTGAGCCTGCCGAGCCTACTGCTAGCA GTCGAACGCGCTTTGTTATTTCCGTGTGCTGTCCGACACTACATGTACCG AACTCACTCCCCTTCACGCAAAATAGCCGCTCTGCGTACGCCCCTCTAGC CCACTGTGCCCTGTGGTGCGATATGAGCAAAATATTCAGCAACAGAATGT ACGCCTGCTGCTGCTACTGCTCAGTGAACACGATTAGCGGATGTGGCAAA GAGAGGAGTAATGTGTTCCTCTTTCTGAACCGTGTGTACGATTACCGTAC GGGCTCCGTATTGGTGATGCAATTACTTGCAACAGACCTGTTGGTGCAGA TCAAAGCACCCACGACATATACACACCACGGTATACGATCCAACAGGGAC CCGGCGAGTCATCAGTGTACTCTCTCTTCTCGCTTGGTTGATCAGTTCAA TCAAAGCATCTGATAGTCCAACATGTTTTCCGCCACGGTTCCATGCATAA GCAATGGAGCCCCGATGATTAAAAGGTTCCACTGTGACAACTGCAACCGG GATGTACAAAACGCCCACAACTGCTGCGCTGCTCCGGTTTACAGGGCAAC CTCTGTCGGCGAACTTGAGGAGGATACAGATGGAGACGTGGAACTATCGA TGGTCCTTCGTCTGAGAGCATTTCGGTAAGAGTGAAGGCATGCTTATTCG AGAAGTTGGAGAAGTGTGGTATGTATGGCGCGGAAACGCAAACCTACAAG CAACGAGCGCACAGAAGGAACAGCGTAAGTCACACGCGGTTGTCGGACGA GGCATGATTTTCTTTCTCCGACGACCAGGTGTCCAGCGTAAGCGTTGCGG CCGCAATCTGCAATAGCCTGCCGCAACAAAGGAGGAGTAAACTTGTTGCC CCCGCCCACCATTGACCACAGCACTTGCTGTGATGCTGTAGGTGATGATG CCAACACGTACAGCAGTAGACCTTCTGTTGAAGGAAAAATACCCCCATCT TCCGCCTCACCACCCCCTCCCTACCGACCGACTGCGTTGCTCTTGTTCCC TTTCCGCAACACAACAGCGAGGACGCCGGAGTACGCGAGATATGCGAGGC CAACGGCCTCAACGAGAATGCGTTTGTCCGGGAGAGTCACCTGCTGCGAT CCTTGGACCTGTTCATGAGCGGCTTGAGGGAGTTGGGCTGCCTCAGCTAC TTCGGAGGCCTGACAGCGATCTGCTTCATCAATGTACCTAACCTCACCTC TGTGTCAGGGCTGGACGCGTGCTGTCCTGGTCAGTACCGTTTCTTGACAG AGCGTGGCTACAATCGCAAGGGTAGCAGCAGATCACAACATGGAGGCAAT ATTGAGTTCAGAATAGATGCCCTGTCCATGGGTGTGGCATCGACACACAT GCCAGTGCCCTCGCCAGAAATTGACAAAGTCCTCTTGACGACAGTGACGG GTAGGGTCCGCACACTGCATTGACAGTTCTGCGTTTGTCATGTGCTAACA ATTGCTGAGCCTTCAATGTTCGCGAATTTGTTGCAGGTCTAGAAAGCCTC AACATCACCGAGTGCGGCCTAGAGACTACGGGAGGGCTGGAGGGTCTGAC AGGCCTAACGGCCTTGCACCTGTCGAGCAACCACCTGCAGTCTTTGGCTG GGGTAGGGGGGATGACAAGACTGAAGAAGCTGTGGGCTAACGATAACCGC ATAAAGTCGGTGAGCGACCGCCCAGGGGATGGGTTCATGATCAAGGGTTA ATCTGCGCCACCGGTGATGCGATTCTGAACAGGACGGACGGAAATATTGC ATGGGCGTTTTATTCTGTGGCATACGGTACCAAATCAATATGCGGCATGC GGTAGCAGATGAGTAGTGCCCGGTTTAGCCTCGGTGTAACCAGTGGCGAG CGTGTGGACCTACGTCACGTCTGCGTGGAGGGCCGTCGAATGTGAGAATG GACCGGCAATCTCGAACTTGTCGGGTGTTGTGATTCCGGTCAGGTTTATC AACGGCCACCCAGGTGGCCCACGGTTACTTCCGTTCGTGTCTCCACGTTG TACAACACCAACATCCTTTTACAAACTCCAAAACGCACGCACAGATGGAC GGGTTATCCTCTCTTGGGGCTCTCGAAGACCTCTGGCTGTGCCGTAACCG GCTGACCGAAATTGGAGACGGCCTCCCCCTGGGCAGAACCCTGCGAGAGG TCAACCTTGCCCACAACCAGCTGGGATGTTTCAAGGAGCTCCTTAAGCTC GCCCCGCTCGAAGGGCTGCGGAGCTTGACGCTCCAGGACATCCACTTTGG CGACAACCCCGTGTGCGGGCTGTCCAACTACAAGACCTACGTCGCGTACC ATTTGACGCAGGTACGTATTTTGTGGCTCGCCCGGATGGGTATAGGACTG AGAGAGTCGGTGACTCTGGACAAGGCAGATAACCGAGGGCACAGAAGCCG CTTCGGTTCCAGCGATGCTTGCACCCTGTTGGGTGTGTCCCATCCAACCT GGTACGTGTTTCTTGCGCGACAAACCGCTGGGGCAGGGTTTGGGTTTTCG GTAAATATCGACGTACTTGTCCCCCTGTTTTGGAAACACCTGCTTGCAGT TAACCTCGTTGGATATGGAGGTGGTCTCGGAGGAATCTAAGGCCTTCGCC AACACCGTCTTCCTCAAGAAGAGCATGTACTACAACATGCGATCGCGGAT TGTGAAGAGGCACGCTGGGCACGTCATCCGAAAGGCGAGCGAATATCAGC GGGCACGCTTTGTCCTACGGCAGTCATTCGGTCGTCCTAGGTCCTTGTTG ATAGCGATGGGTCGCTCACTTTGCACAGCAATAATGGTCGGCCGGTTCAC AACAACTTCTCCAGCTTCCTAAGGATGGCGTGATTTGAGGCATCGCGCGG GGTGCGCGTGTTCCGTCTCCACCCAAACCGCCGCTGTCGCCGCCGCCGCC GCCGCCGCCGCCGCCTGCACTCTGGAAATTCTGTTGCTCGCCGGTCTTGA AACCCCTCTTCCTTACGTGAGCATCCCGTTTCCACCGTGTGCCGTACCAA CCGACCTTTTTTTCCTCGGCTCGGTTTCGAAAAACTCGTGCTGTATCTTG ATGCTTGCAACACTCACTTTTGTGGTCACACTTTTTTCGTGCTTGGGAAC CCTTGCTTTTTCGCGGTTGGAAAACACTCGCTTTTTGATGTTGGAACAGG CTACAGAGCTCTGCGGGGAGAAGGCCGCCAACCTCCAGACCACGCTTATC CACCTCCAGTGGCAGAGGAAGCACGTCGAGCAGCGCCTTATGGCCAGGCG CGCGGCCCATGACCTAGGCAACGGGGATGCTGAAGCCACTGTTGCTGGCG ACGATGCTGCCAGTGACGGGCTTACCGCCACAGACGCGGCCGTTATAAAG GGGGGCAGCGGGTGTCCGGCAACAGTACAGAGCAGCAACAGCAGAAAACG GAAGGGCGCAATCGCGAGCAGTACATCATCGCCCTCCACGCCTGGCAGCA CCAAAAGGTCTACCTCTCGCGCAACAGCAGCGGCGGAGCCCGAAGGGCTG GAGGTGCTGCAGCTGATTGCGAAGGGGCAGGCCCTCTCTAGCGCGGTGAC GGTGGTGGAAGGGGTGCTGCACAAAATGGAAGAGCAGGCGAGAATTAGGA CGGTTTGGAGGTAGAGGTGGCTCCTTTCGGGGGGGGATAGGGGACCGGCT ACCGCTCGCAGTGGGCAATGTTTGATTTAGATTGTGTGCTGGGCAACCTG TGGCGTTAGCCCTGACAATACTCTCAGATGTTGGAACAGTGGGGATGGTA CAGACGTCGACAACGTTTTGGCTGCAGGTTGACTCTGGTCACTCTCGAGC AAAGTCGGTATCATGTGGGTTCAGCTCGTTGAGTTTTTAGCCCCGTGCGA CTACATGTAGTTCCTCCGTCGCCTCTCCCTTTCCTGCTTCCGTCGCACTC AATCGAGATCACCCTTTGAGGATACAGACCTCTGCAAGTCTTCGTGTCAT TCTCAACCGTGCTTTTCTGACGCCCCCGCCTGAATGACGACGCAGTTGGG AGTATTCAAAGAGGTGGTGGGGCGGGCATGCAAGCGAGCGGTGTCAGAGC TGATGCTGGAGTTTGACACAGGAGGGAATGTGCGCTTCGAGGAAGGCCGA CCGGGTGACGTCTGGTTTTCTTCCTGCGCCGATCTCGTCAAGTCACGCGT GGTGAGCCAGTCGGCCGTGCGTGGGGGGGGGTTCTCGTGTTAACGCATGC CGTAGTCGGTAGGCCGTAGACCTCGCATCCCTGCAATACCGGGATTGAGC GATACGTTCGGGTTTTGTTGCACCAGGTTACGTTTCACAAGGATGAACCA GACGGTGGTCATCATCCTTGCTTTTGTTGTGCTAAACCAGATATGCCATG GGCTGATTGAGCATCCCGGCTAACCAACCGTTCAACTTTCCGGGCTCGCA GATCACGGCAGCGGGGCAGGGGTTGGCTTCCGGTGTGAAAGTTTCCCGGG TAATTCGCATCCACAACCGCTTCCTCAAGAACCGCTTCGAGCGTTGCGTT CGGGAGGCCAAGACCCCAGCGACGTCCACCACCCCTTCCGCCGCAGTAAA CCTCGCCGGAACAACGCCGATGACGGCGATCCCGCCGAGTGTTTTAATCG ACAAGTCACCGAGCCCCTCTCAGCACGAAGGGGGCCCCTCCTCCTCCGGC TGTCCTCCTTCGCCACCACCGATGAGTGCCGTCGAACCCGCGTCGACTGG CGGCTTGTCGAGCGGCGGGAGACACCAGCAGCTCGCGGGAAACGAAGTCT CGACCGGCGACAGCACAAGGGAGGACGGGGAAGGGTGCCGTCGAGGGGCC GGCCTCTCCACGGAAGGGAAGGCTTGGCGCAGCCCGTTATTATCGGTGCC CCAGGAGCTCAAGAAACGCGACAGCGACAGCGACAGCCACCCGTGTGGAT CGCCGATCCGGGCCGCCGAGACGGCGGCAACTGCTGTCGATGCTTCTTTC GCCGGCGCTGCCGACAGCGGCAGGAGCAGCTCCGCTGCCAGCGGGGATCT ACTACCAATCAGTATCCCCGGAGGCGGTAGTCTGTCGAGAGCCGCCGCCG AGGGAGGGGGTAAGAAGAGCGACAAGCGATCGTCCTCGTCATCGCCGTCA TCGTCCCCCCGAAGCCTGGAGTATCTATTTTACACGGAGGGGAGGGGTAG GACGGCCAGAAGCAGGGAACCAAGCGGTGGTGGCGACTGGAGCAACAGCG GCGGCACCGGCGGTGCGTTTGATGCCGGCGTGAGCGGTGGCAGCGCGCAC GACAGCTGGCAGCCGGACCTCCTAAAGCTGGCCGAGGACGGCTTTCGTCT GACGGACTGGAGCGAGGCCAACACCAGCACCTACGGGAACACCGCGACCA CTGAAGAGCGGTCGGCATCAGAAGTGCGGGGTGGGGTAACGCAACTTGCC GGCCAACCGGGGACGGTCGGAAGGCATACCGCCGCGTCGGCCAGTGAAGT CTCCCACAGATGCCGAAGGGAGGAAGAGCATGCCCCCTGCCGGGCTCAGT CCATTGTTCTTTCCACTCACCTGTGCGAGGCCGACATCCCCGGCAGGAAG GCGGCTACCCCGGCGGTGGCGGCGGCGGCGAAAAGGACCAGCTCGGACTC CGTCGTCTTCGCGCCGCCGGCCTCGGTCGGGCTGGGGAACGAAGCGTTCG TGCCGCCGGTGTACAGGGTCCTAGTGGTCAAGGTGTACACGGGTCGGACT CGCCGTCTGCCGCCTGGGTCGTCCGCGGGCTGCGGCGAGGGGGGAGTTTG GTGCAGCAGTGCCACCAGGAGGCCTCCCCGGCTCGGAGTGCTGAGGGAGG CCTGGGCAAAGGGGTACAAGTCGGTGTGCGTTAGCGGAGAGGATGGGGTG AGCGCGGGCGGCGGCGGTGGTGGCCATGCCAACGGAGAGGGGGGGGGTTC TACCAAAAGCGCGCCATCTCGGTACCAGGTTAGCTTTTGGGGGTGTCCTT TTCGGGTACCCACGCGTAGACCTTACCGTTGGATATTGGGATCGCTGTGT TGTTGCCGAATGGTGTACCCGTGGTATAGGTTCGAAGATTTTGGAGTCGT TGTACTTTCCAATTCTCGTGGTTCACGATGGGGTCGTGTTGAAGTTGACG GTGATGCATCAATGTGCTGCATCACGAGAACCGACGACGTGTATCTGCAA GAGACGGGGCGACTCGAGTACGTCTCCGACTGAGGTCAGGTGTTTAGGGT GCGTTGTTCGTCGACAACACAACACCTGTTTATACTCACGCTTTTCTGAC GCTCCTCGAACTGACGATGCTACACGCGTGTCTCAAGGAATGGCATGTGC TGGACGGCGCGCTGGCTCTACCGGAGTACATAATTGAGTTCGACTTCTCG CCCGAGATGGGGAAGGTAGGAAAAACAAACAATACAATATGCAGCCTGTA GGCAGAGAAAGTCGGGGAGGAAGTGATGTACACTAGTTCATACATGGTCG TAGCCTCCAGAACATTGAAGACCCCCGCATCCCTACAAAAAACAATGTTC GCTCGCCCCCTTCCGTTGTTGGCCCCCAAGGATGGGCAAGCCATCAAGGA CGGCGTGCGCCAGCGCGTCAACAAGTGGAGGCACGAGCTGGCTCCTTCCT ACCGATCCTCCTCCCTCGCCTCCTCCCCATCCTCATCATCTTCCTGTCCG CCAGCTTCTACGTCATCGAAGTCCTCGACCGCTAAGGCGACCGGTAGCGG CGGCGGCAGCAGCAGCGGCAGCAGCGGACGGGCGTCCGGGGGATCGGACG TGCTGCCGTTTCTGATCCCCCTGGCGAGGTTAGCGAGGCAGCTCGAGATA GACGCGGCCTCTTACGCAACTAGGTATGCAAAGTTGAGAGAAAAAATCTG GACGCGACGAGCGCGAGTCCAGAATCGTCGAAAATCGCGGAGACAGCAGA GCAAAACCTCAAGCATGTAACCATGCAAAGGTGTGCACTAGCACCGATGC ATTTCACAGGCCTTGTTCTTGCCCAAGCAGAATAGTCTGCAGTGATGAAG GGTCAATCGCCTCCGTAAAGGCAATGTTGAGCTGTTATGGTGTCGCAATG GGCGCTAATCGATTTTCGCCTCACGGGTTCGCGGCAAGGACGGAGAGGTT AGAGGTAGTCTAGAGAGAGCCCCTTCTTTCGAAAAAGACACATTTTACGG GAACGTCCCGCGTCGGCGTCCCTTCGCGAACGCTATTGGCGCCCTTCGGG CGCGACTCTGAAGAAAGTAACCCCCCTCTACCCCAAAACAACCAAACGTT AAAAACTGCTCTTACGACGCGAAGCCAGCATGCGCATGTTGTTTACTTCG CTTTATTGTTGCTCATTGCGTTTCTGTTCTCGGGATGTACGTTATATTCC CCGACCACCGAGTCCGCGGTAACCTTGGCGAAAACTTTGAAGCCGGCATC CCGCTGCCCCTCCTCTTGAAATACTCACCCTCCCACACGTCTCAGATACG AGGCCGGAATCTCGAAGGCCTTGAGGATGCAACCGTCGGCTCCGGCCCTG GGCATCCCGCCCGCTTCGAACAACGACAAAGGGTGCGGCGTGGGTTCGGG TGGCTGCGGTGATGGCGGCGTGTCCGCCGCTCCAGGGGATCGCCTAGAAC ACCTGCCAGCGTGCGCCGTTGCCCCCAGGCCTGGCCACATGTTGACTCGC CTGAGCTTGCATGGGCAGGGGGTCCGCACGATCGAGGGTCTAGAGGCCTG TCGCAACCTCAAAGTGCTGGTGAGCGCAACAGGCCGGTTTCGAGACCACT GACTGATTTTTTTGTGAATCCAACGTGCGATTCATCCCTTGTGCCGCACG AGAACCACTACTACGTTTCCAAATATATATGTAAGTCCACATACCTCAGG CCCCCACAGCAGTCTCGTCTCACGATTCCCTACAAGCAAGAGGTCTCAAT CGTAGGATTGTTCCCTCTTGATGTTCGACCACCCTCCGTGCGCCAACTAC AGTGTAGCGTAATCGTACACCCTTAACCCGACCAGCTTTTCCCGCCCATC GGCCGGCGTTCGATTTTTTCCCCGGCCGGATGTTTTAGATCCTGAGCTTC AACGAAATTTCTTGCCTCCATGGACTGGCCGGCTTGACGCACCTCCGGCA CCTCGACCTGGGGTACAACATCATCGAAGGCGTGCAGCACTACGGCTGCG CCACCGCTACCAAAGCGACCCCTGATGCCGACGAGGACGGCGATGCCGTT GTGGCCCCCGATGACTACACCGCCGGCAGTGGCGCTACGATCGTTCCGAA CACAGTAGCGCGTAGCAGTACTGGACACGAGCGATCACGTACGTCGGAGG AGACTCCGAGGAAAGCGGCCGTTTTCAAAGCAGCGGCAGCGTCGGCGTCG GCGGCGCGCGGGGATGCGGGCGGTGGGAGGGGGAAGGACGAGGGGGAAAC GGGGTGCGCGTCTCCAGCCACCGCGGATATCTCGCTCCCTTCCTTGACGC GCTTGGATTTAAACAATAACATCTTGCACAACTTGGACGACCTGAAGGTG GGAGGCGAGGTGGAGTTCGTCTATTCCGAATCAAGCAACCACAAAAATGC CGCACGCTTTTGTTCATTGCAACTCTCTTCTGTTCTTCATCAAATGCCGT GTGTTTTCTTGTCAAAAAGTCAGAAACACGAATTTGGGTAGAAAAGCGGC GTTTGATCAAGGTATTCGCTCGAAACACGAGCAAATGCTTCTCTCCAGTA GTAAAAAATTGGAACCAAGCACCGGATCCTGCCGTATAACCCCCAGAAGG AAAAGACGGTGGGGGTAAGTTACGACCACAAGGGGTAGTATTCGTGGAAC GACGAGACGGCACTAGTCAGATAGGTGTGATCCGCTTTGGTCTAATCCCC TTGGGTGTTCCAAACCATGACACAACCCGTAAAACACAGGCGTTGTGGAA CATTGCCCCGAACTTGACCGTCCTTGACATGCGGGGGAACCCGCTCAGGG CGGCCAGGACGTACCGCGGCGCGGCTGTCAGGTACGGTGTACCA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig706:3..9596-

>mRNA_Ecto-sp13_S_contig706.18130.1 ID=mRNA_Ecto-sp13_S_contig706.18130.1|Name=mRNA_Ecto-sp13_S_contig706.18130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4275bp|location=Sequence derived from alignment at Ecto-sp13_S_contig706:3..9596- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGAAAACAAGACGATCTATGCATAGCTCAGGGGCAACCTCTGTCGG
CGAACTTGAGGAGGATACAGATGGAGACGTGGAACTATCGATGGTCCTTC
GTCTGAGAGCATTTCGCGAGGACGCCGGAGTACGCGAGATATGCGAGGCC
AACGGCCTCAACGAGAATGCGTTTGTCCGGGAGAGTCACCTGCTGCGATC
CTTGGACCTGTTCATGAGCGGCTTGAGGGAGTTGGGCTGCCTCAGCTACT
TCGGAGGCCTGACAGCGATCTGCTTCATCAATGTACCTAACCTCACCTCT
GTGTCAGGGCTGGACGCGTGCTGTCCTGGTCTAGAAAGCCTCAACATCAC
CGAGTGCGGCCTAGAGACTACGGGAGGGCTGGAGGGTCTGACAGGCCTAA
CGGCCTTGCACCTGTCGAGCAACCACCTGCAGTCTTTGGCTGGGGTAGGG
GGGATGACAAGACTGAAGAAGCTGTGGGCTAACGATAACCGCATAAAGTC
GATGGACGGGTTATCCTCTCTTGGGGCTCTCGAAGACCTCTGGCTGTGCC
GTAACCGGCTGACCGAAATTGGAGACGGCCTCCCCCTGGGCAGAACCCTG
CGAGAGGTCAACCTTGCCCACAACCAGCTGGGATGTTTCAAGGAGCTCCT
TAAGCTCGCCCCGCTCGAAGGGCTGCGGAGCTTGACGCTCCAGGACATCC
ACTTTGGCGACAACCCCGTGTGCGGGCTGTCCAACTACAAGACCTACGTC
GCGTACCATTTGACGCAGTTAACCTCGTTGGATATGGAGGTGGTCTCGGA
GGAATCTAAGGCCTTCGCCAACACCGTCTTCCTCAAGAAGAGCATGTACT
ACAACATGCGATCGCGGATTGTGAAGAGGCACGCTGGGCACGTCATCCGA
AAGGCGAGCGAATATCAGCGGGCACGCTTTGCTACAGAGCTCTGCGGGGA
GAAGGCCGCCAACCTCCAGACCACGCTTATCCACCTCCAGTGGCAGAGGA
AGCACGTCGAGCAGCGCCTTATGGCCAGGCGCGCGGCCCATGACCTAGGC
AACGGGGATGCTGAAGCCACTGTTGCTGGCGACGATGCTGCCAGTGACGG
GCTTACCGCCACAGACGCGGCCGTTATAAAGGGGGGCAGCGGGTGTCCGG
CAACAGTACAGAGCAGCAACAGCAGAAAACGGAAGGGCGCAATCGCGAGC
AGTACATCATCGCCCTCCACGCCTGGCAGCACCAAAAGGTCTACCTCTCG
CGCAACAGCAGCGGCGGAGCCCGAAGGGCTGGAGGTGCTGCAGCTGATTG
CGAAGGGGCAGGCCCTCTCTAGCGCGGTGACGGTGGTGGAAGGGGTGCTG
CACAAAATGGAAGAGCAGGCGAGAATTAGGACGTTGGGAGTATTCAAAGA
GGTGGTGGGGCGGGCATGCAAGCGAGCGGTGTCAGAGCTGATGCTGGAGT
TTGACACAGGAGGGAATGTGCGCTTCGAGGAAGGCCGACCGGGTGACGTC
TGGTTTTCTTCCTGCGCCGATCTCGTCAAGTCACGCGTGATCACGGCAGC
GGGGCAGGGGTTGGCTTCCGGTGTGAAAGTTTCCCGGGTAATTCGCATCC
ACAACCGCTTCCTCAAGAACCGCTTCGAGCGTTGCGTTCGGGAGGCCAAG
ACCCCAGCGACGTCCACCACCCCTTCCGCCGCAGTAAACCTCGCCGGAAC
AACGCCGATGACGGCGATCCCGCCGAGTGTTTTAATCGACAAGTCACCGA
GCCCCTCTCAGCACGAAGGGGGCCCCTCCTCCTCCGGCTGTCCTCCTTCG
CCACCACCGATGAGTGCCGTCGAACCCGCGTCGACTGGCGGCTTGTCGAG
CGGCGGGAGACACCAGCAGCTCGCGGGAAACGAAGTCTCGACCGGCGACA
GCACAAGGGAGGACGGGGAAGGGTGCCGTCGAGGGGCCGGCCTCTCCACG
GAAGGGAAGGCTTGGCGCAGCCCGTTATTATCGGTGCCCCAGGAGCTCAA
GAAACGCGACAGCGACAGCGACAGCCACCCGTGTGGATCGCCGATCCGGG
CCGCCGAGACGGCGGCAACTGCTGTCGATGCTTCTTTCGCCGGCGCTGCC
GACAGCGGCAGGAGCAGCTCCGCTGCCAGCGGGGATCTACTACCAATCAG
TATCCCCGGAGGCGGTAGTCTGTCGAGAGCCGCCGCCGAGGGAGGGGGTA
AGAAGAGCGACAAGCGATCGTCCTCGTCATCGCCGTCATCGTCCCCCCGA
AGCCTGGAGTATCTATTTTACACGGAGGGGAGGGGTAGGACGGCCAGAAG
CAGGGAACCAAGCGGTGGTGGCGACTGGAGCAACAGCGGCGGCACCGGCG
GTGCGTTTGATGCCGGCGTGAGCGGTGGCAGCGCGCACGACAGCTGGCAG
CCGGACCTCCTAAAGCTGGCCGAGGACGGCTTTCGTCTGACGGACTGGAG
CGAGGCCAACACCAGCACCTACGGGAACACCGCGACCACTGAAGAGCGGT
CGGCATCAGAAGTGCGGGGTGGGGTAACGCAACTTGCCGGCCAACCGGGG
ACGGTCGGAAGGCATACCGCCGCGTCGGCCAGTGAAGTCTCCCACAGATG
CCGAAGGGAGGAAGAGCATGCCCCCTGCCGGGCTCAGTCCATTGTTCTTT
CCACTCACCTGTGCGAGGCCGACATCCCCGGCAGGAAGGCGGCTACCCCG
GCGGTGGCGGCGGCGGCGAAAAGGACCAGCTCGGACTCCGTCGTCTTCGC
GCCGCCGGCCTCGGTCGGGCTGGGGAACGAAGCGTTCGTGCCGCCGGTGT
ACAGGGTCCTAGTGGTCAAGGTGTACACGGGTCGGACTCGCCGTCTGCCG
CCTGGGTCGTCCGCGGGCTGCGGCGAGGGGGGAGTTTGGTGCAGCAGTGC
CACCAGGAGGCCTCCCCGGCTCGGAGTGCTGAGGGAGGCCTGGGCAAAGG
GGTACAAGTCGGTGTGCGTTAGCGGAGAGGATGGGGTGAGCGCGGGCGGC
GGCGGTGGTGGCCATGCCAACGGAGAGGGGGGGGGTTCTACCAAAAGCGC
GCCATCTCGGTACCAGGAATGGCATGTGCTGGACGGCGCGCTGGCTCTAC
CGGAGTACATAATTGAGTTCGACTTCTCGCCCGAGATGGGGAAGGATGGG
CAAGCCATCAAGGACGGCGTGCGCCAGCGCGTCAACAAGTGGAGGCACGA
GCTGGCTCCTTCCTACCGATCCTCCTCCCTCGCCTCCTCCCCATCCTCAT
CATCTTCCTGTCCGCCAGCTTCTACGTCATCGAAGTCCTCGACCGCTAAG
GCGACCGGTAGCGGCGGCGGCAGCAGCAGCGGCAGCAGCGGACGGGCGTC
CGGGGGATCGGACGTGCTGCCGTTTCTGATCCCCCTGGCGAGGTTAGCGA
GGCAGCTCGAGATAGACGCGGCCTCTTACGCAACTAGATACGAGGCCGGA
ATCTCGAAGGCCTTGAGGATGCAACCGTCGGCTCCGGCCCTGGGCATCCC
GCCCGCTTCGAACAACGACAAAGGGTGCGGCGTGGGTTCGGGTGGCTGCG
GTGATGGCGGCGTGTCCGCCGCTCCAGGGGATCGCCTAGAACACCTGCCA
GCGTGCGCCGTTGCCCCCAGGCCTGGCCACATGTTGACTCGCCTGAGCTT
GCATGGGCAGGGGGTCCGCACGATCGAGGGTCTAGAGGCCTGTCGCAACC
TCAAAGTGCTGATCCTGAGCTTCAACGAAATTTCTTGCCTCCATGGACTG
GCCGGCTTGACGCACCTCCGGCACCTCGACCTGGGGTACAACATCATCGA
AGGCGTGCAGCACTACGGCTGCGCCACCGCTACCAAAGCGACCCCTGATG
CCGACGAGGACGGCGATGCCGTTGTGGCCCCCGATGACTACACCGCCGGC
AGTGGCGCTACGATCGTTCCGAACACAGTAGCGCGTAGCAGTACTGGACA
CGAGCGATCACGTACGTCGGAGGAGACTCCGAGGAAAGCGGCCGTTTTCA
AAGCAGCGGCAGCGTCGGCGTCGGCGGCGCGCGGGGATGCGGGCGGTGGG
AGGGGGAAGGACGAGGGGGAAACGGGGTGCGCGTCTCCAGCCACCGCGGA
TATCTCGCTCCCTTCCTTGACGCGCTTGGATTTAAACAATAACATCTTGC
ACAACTTGGACGACCTGAAGGCGTTGTGGAACATTGCCCCGAACTTGACC
GTCCTTGACATGCGGGGGAACCCGCTCAGGGCGGCCAGGACGTACCGCGG
CGCGGCTGTCAGGTACGGTGTACCA
back to top