prot_Ecto-sp13_S_contig7055.18124.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7055.18124.1
Unique Nameprot_Ecto-sp13_S_contig7055.18124.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length268
Homology
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: A0A6H5LD19_9PHAE (MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD19_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 2.100e-154
Identity = 246/261 (94.25%), Postives = 250/261 (95.79%), Query Frame = 0
Query:    1 MSLQRCTLSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQARDTSEPMDVDAXXXXXXXXXXXXXXXXXXXXRTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAVVGEEEPLDAESAQAAITRRRGEGQD 261
            MSLQRCTLSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSK+GTIEVTAFQARDTS+PMDVDA   XXXXXXXXXXXXXXXX RTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDA+VGEEE  D ES Q   TRRRGEG+D
Sbjct:    1 MSLQRCTLSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKVGTIEVTAFQARDTSDPMDVDAAVGXXXXXXXXXXXXXXXX-RTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAMVGEEESFDTESPQDTRTRRRGEGED 260          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: D7FVU5_ECTSI (MPN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU5_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 5.830e-132
Identity = 223/237 (94.09%), Postives = 226/237 (95.36%), Query Frame = 0
Query:   29 MGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQARDTSEPMDVDAXXXXXXXXXXXXXXXXXXXX----RTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAVVGEEEPLDAESAQAAITRRRGEGQD 261
            MGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAE+MSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSK+GTIEVTAFQARDTSEPMDVDAXXXXXXXXXXXXXXXXXXXX    RTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDA+VGEEEP DAES Q   TRRRG G D
Sbjct:    1 MGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAEKMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKVGTIEVTAFQARDTSEPMDVDAXXXXXXXXXXXXXXXXXXXXXXXXRTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAMVGEEEPFDAESPQDTRTRRRGGGID 237          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: A0A836CFJ1_9STRA (MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.960e-45
Identity = 94/182 (51.65%), Postives = 116/182 (63.74%), Query Frame = 0
Query:   56 MILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQARDTSEPMDV----DAXXXXXXXXXXXXXXXXXXXXRTEVALSLHGPGSGSSTTPLSDALERVVRLQDTLFGEERAGYLAALRQN 233
            M+LTRTDK+ DR EV  +QLA A+ +AE MS QLG+  RV GWYHSHPHITVLPSHVDVRTQ QYQ MD  FIGLIF+VF +D   K+G IEVTAFQ+  +S         DA                       + L++H P  GS+  P++DAL  +  LQ+TLF EERA YL+AL+Q+
Sbjct:    1 MVLTRTDKQPDRCEVSVEQLAAASTVAENMSRQLGKTVRVCGWYHSHPHITVLPSHVDVRTQMQYQFMDEGFIGLIFAVFQQDGQ-KVGKIEVTAFQSMKSSSAASQVHTHDAGTSASDSGKQLPVHSEWVGKN--IPLAIHPPDGGSAV-PIADALNVLCGLQNTLFEEERAAYLSALQQH 178          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: UPI0013F2751B (lys-63-specific deubiquitinase BRCC36 n=1 Tax=Hylobates moloch TaxID=81572 RepID=UPI0013F2751B)

HSP 1 Score: 156 bits (394), Expect = 7.450e-44
Identity = 79/146 (54.11%), Postives = 101/146 (69.18%), Query Frame = 0
Query:    8 LSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQA 153
            L   AF  C +HA+STEK+EVMGL +G  +D T  D      V +   +IL R+DKR+DRVE+  +QL+ A+  AER++   G+  RVVGWYHSHPHITV PSHVDVRTQ  YQ MD+ F+GLIFS F EDK++K G +  T FQ+
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRVDAVRI--VHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 157          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: A0A3R7P3R7_PENVA (Lys-63-specific deubiquitinase BRCC36 n=4 Tax=Penaeus TaxID=133894 RepID=A0A3R7P3R7_PENVA)

HSP 1 Score: 156 bits (394), Expect = 7.490e-43
Identity = 80/152 (52.63%), Postives = 107/152 (70.39%), Query Frame = 0
Query:    8 LSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVD--HAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQARDTS 157
            L+  A+  C  HA++TEK+EVMGLL+G++ +G          VT D   A+ L R+DKR+DRVE+  + L EA   AE+MSA  GQ+  +VGWYHSHPHITV PS +D++TQ  YQ MD RFIGLIFSV++EDK +K+G+ +VT FQA + S
Sbjct:    8 LAADAYLVCLHHALTTEKEEVMGLLVGQFSEGN--------EVTCDIYSAVTLRRSDKRKDRVEISPEMLIEAQQKAEQMSASSGQELHIVGWYHSHPHITVWPSDIDLQTQAGYQQMDSRFIGLIFSVYNEDKKTKVGSHQVTCFQATNQS 151          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: UPI001C44DEF6 (lys-63-specific deubiquitinase BRCC36-like n=2 Tax=Astacidea TaxID=6712 RepID=UPI001C44DEF6)

HSP 1 Score: 155 bits (393), Expect = 1.060e-42
Identity = 77/150 (51.33%), Postives = 105/150 (70.00%), Query Frame = 0
Query:    8 LSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQARDTS 157
            L+  A+  C  HA++TEK+EV+GLL+G + +GT           +  A+ L R+DKR+DRVE+  + L EA   AE+MSA  GQ+  +VGWYHSHPHITV PS +D++TQ  YQ MD RFIGLIFSV++EDK +K+G+ +VT FQA + S
Sbjct:    8 LAADAYLVCLHHALTTEKEEVLGLLVGEFSEGTE------VVCDIHSAVTLRRSDKRKDRVEISPEMLIEAQQRAEQMSASSGQELHIVGWYHSHPHITVWPSDIDLQTQAGYQQMDSRFIGLIFSVYNEDKKTKVGSHQVTCFQATNQS 151          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: UPI0018A24067 (lys-63-specific deubiquitinase BRCC36 isoform X3 n=2 Tax=Chelonia mydas TaxID=8469 RepID=UPI0018A24067)

HSP 1 Score: 154 bits (388), Expect = 2.320e-42
Identity = 83/161 (51.55%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 MSLQRCTLSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHA--------MILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQA 153
            M++Q   L   AF  C +HA+STEK+EVMGL +G    G    G   P   VD +        +IL R+DKR+DRVE+  +QL+ A+  AER++   G+  RVVGWYHSHPHITV PSHVDVRTQ  YQ MD+ F+GLIFS F EDK++K G I  T FQ+
Sbjct:    1 MAVQAVHLEADAFLVCLNHALSTEKEEVMGLCIGEVPAGPRAGGLPEPGRWVDTSRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEITGRSMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQS 161          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: A0A7J7S4H9_PIPKU (Lys-63-specific deubiquitinase n=2 Tax=Microchiroptera TaxID=30560 RepID=A0A7J7S4H9_PIPKU)

HSP 1 Score: 154 bits (388), Expect = 3.240e-42
Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 0
Query:    8 LSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRD------GTSCPAVT----------VDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQA 153
            L   AF  C +HA+STEK+EVMGL +G  +D T  D      GT    VT          +   +IL R+DKR+DRVE+  +QL+ A+  AER++   G+  RVVGWYHSHPHITV PSHVDVRTQ  YQ MD+ F+GLIFS F EDK++K G +  T FQ+
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFTYTGTDMRTVTEKVDTVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: G3WEK8_SARHA (Lys-63-specific deubiquitinase n=8 Tax=Metatheria TaxID=9263 RepID=G3WEK8_SARHA)

HSP 1 Score: 154 bits (388), Expect = 4.490e-42
Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = 0
Query:    8 LSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAVTVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQARDTSEPMDVD 163
            L   AF  C +HA+STEK+EVMGL +G        +  +C  V +   +IL R+DKR+DRVE+  +QL+ A+  AER++   G+  RVVGWYHSHPHITV PSHVDVRTQ  YQ MD+ F+GLIFS F EDK++K G +  T FQ+    +  D +
Sbjct:    8 LDSDAFLVCLNHALSTEKEEVMGLCIG--------EVDACKIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPVRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRLLYTCFQSVQAQKSADYE 155          
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Match: A0A7J8J4T5_MOLMO (Lys-63-specific deubiquitinase n=4 Tax=Boreoeutheria TaxID=1437010 RepID=A0A7J8J4T5_MOLMO)

HSP 1 Score: 152 bits (383), Expect = 4.750e-42
Identity = 81/162 (50.00%), Postives = 103/162 (63.58%), Query Frame = 0
Query:    8 LSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRD------GTSCPAVT----------VDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYHSHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTAFQA 153
            L   AF  C +HA+STEK+EVMGL +G  +D T  D      GT    V           +   +IL R+DKR+DRVE+  +QL+ A+  AER++   G+  RVVGWYHSHPHITV PSHVDVRTQ  YQ MD+ F+GLIFS F EDK++K G +  T FQ+
Sbjct:   14 LESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFTYTGTEMRTVAEKVDTVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQS 175          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7055.18124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LD19_9PHAE2.100e-15494.25MPN domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVU5_ECTSI5.830e-13294.09MPN domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CFJ1_9STRA2.960e-4551.65MPN domain-containing protein n=1 Tax=Tribonema mi... [more]
UPI0013F2751B7.450e-4454.11lys-63-specific deubiquitinase BRCC36 n=1 Tax=Hylo... [more]
A0A3R7P3R7_PENVA7.490e-4352.63Lys-63-specific deubiquitinase BRCC36 n=4 Tax=Pena... [more]
UPI001C44DEF61.060e-4251.33lys-63-specific deubiquitinase BRCC36-like n=2 Tax... [more]
UPI0018A240672.320e-4251.55lys-63-specific deubiquitinase BRCC36 isoform X3 n... [more]
A0A7J7S4H9_PIPKU3.240e-4250.62Lys-63-specific deubiquitinase n=2 Tax=Microchirop... [more]
G3WEK8_SARHA4.490e-4250.00Lys-63-specific deubiquitinase n=8 Tax=Metatheria ... [more]
A0A7J8J4T5_MOLMO4.750e-4250.00Lys-63-specific deubiquitinase n=4 Tax=Boreoeuther... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 5..156
e-value: 7.7E-12
score: 55.3
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 3..124
e-value: 4.6E-26
score: 91.1
NoneNo IPR availableGENE3D3.40.140.10coord: 1..165
e-value: 3.2E-48
score: 165.3
NoneNo IPR availablePANTHERPTHR10410:SF2BRCA1/BRCA2-CONTAINING COMPLEX SUBUNIT 3coord: 3..235
NoneNo IPR availablePANTHERPTHR10410EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDcoord: 3..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..267
NoneNo IPR availableSUPERFAMILY102712JAB1/MPN domaincoord: 7..138
IPR040749BRCC36, C-terminal helical domainPFAMPF18110BRCC36_Ccoord: 207..234
e-value: 1.5E-6
score: 28.3
IPR037518MPN domainPROSITEPS50249MPNcoord: 6..157
score: 22.388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7055contigEcto-sp13_S_contig7055:744..7437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7055.18124.1mRNA_Ecto-sp13_S_contig7055.18124.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7055 744..7437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7055.18124.1 ID=prot_Ecto-sp13_S_contig7055.18124.1|Name=mRNA_Ecto-sp13_S_contig7055.18124.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=268bp
MSLQRCTLSWQAFTTCASHAMSTEKQEVMGLLLGRWHDGTGRDGTSCPAV
TVDHAMILTRTDKREDRVEVGYKQLAEAADIAERMSAQLGQDTRVVGWYH
SHPHITVLPSHVDVRTQGQYQSMDRRFIGLIFSVFSEDKHSKIGTIEVTA
FQARDTSEPMDVDAAAGAGAGRGSRGGGGGGGWERTEVALSLHGPGSGSS
TTPLSDALERVVRLQDTLFGEERAGYLAALRQNDAVVGEEEPLDAESAQA
AITRRRGEGQDGGGRRC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
IPR040749BRCC36_C
IPR037518MPN