prot_Ecto-sp13_S_contig7051.18120.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7051.18120.1
Unique Name	prot_Ecto-sp13_S_contig7051.18120.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	109

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7051.18120.1 vs. uniprot
Match: D7FT82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT82_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.420e-68
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0

Query:    1 LALCAITIVPVRVVLIAVFLSSYYVLALSFMTVAPDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRGEPRVFVSNHISFIEVLVFLHQLGPSFVMKRT 108
            LALCAITIVP+RVVLIAVFLSSYYVLALSFMTVAPDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRGEPRVFVSNHISFIEVLVFLHQLGPSFVMKRT
Sbjct:   55 LALCAITIVPLRVVLIAVFLSSYYVLALSFMTVAPDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRGEPRVFVSNHISFIEVLVFLHQLGPSFVMKRT 162

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BLAST of mRNA_Ecto-sp13_S_contig7051.18120.1 vs. uniprot
Match: A0A6H5K2Q1_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Q1_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.810e-64
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0

Query:    1 LALCAITIVPVRVVLIAVFLSSYYVLALSFMTVAPDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRGEPRVFVSNHISFIEVLVFLHQLGPSFVMKRT 108
            LALCAITIVPVRV LIAVFLSSYYVLALSFMTVAPDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRG+PRVFVSNHISFIEVLVFLHQLGPSFVMKRT
Sbjct:   55 LALCAITIVPVRVALIAVFLSSYYVLALSFMTVAPDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRGQPRVFVSNHISFIEVLVFLHQLGPSFVMKRT 162

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BLAST of mRNA_Ecto-sp13_S_contig7051.18120.1 vs. uniprot
Match: M1UWM2_CYAM1 (Similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UWM2_CYAM1)

HSP 1 Score: 53.9 bits (128), Expect = 4.190e-6
Identity = 26/73 (35.62%), Postives = 39/73 (53.42%), Query Frame = 0

Query:   35 PDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRGEPRVFVSNHISFIEVLVFLHQLGPSFVMKR 107
            P   W   I    +R+ SRFLLL+ G+W V   G   +        + VSNH+SF ++L F++   P+FV K+
Sbjct:  160 PLPRWRRRIVFGVLRFFSRFLLLVYGFWRVREFGDLGSRQNLSSGTLIVSNHVSFFDILYFIYAFAPAFVAKK 232

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BLAST of mRNA_Ecto-sp13_S_contig7051.18120.1 vs. uniprot
Match: R7Q9H3_CHOCR (PlsC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9H3_CHOCR)

HSP 1 Score: 52.0 bits (123), Expect = 1.920e-5
Identity = 33/116 (28.45%), Postives = 53/116 (45.69%), Query Frame = 0

Query:    3 LCAITIVPVRVVLIAVFLSSYYVLALSF-----------MTVAPDRPWAHAISIFCVRWASRFLLLLLGYWTVDVKGMEENAGRRGEPRVFVSNHISFIEVLVFLHQLGPSFVMKR 107
            LCA+ ++P+R+++  V     Y+L L F            +  P   W  A+ +F  +  +R LLL LG+WTV  +          +    VSNH S  +  +  +   P+FV KR
Sbjct:   56 LCAVLLIPLRLLVAVVATLLSYLLVLVFGPPVTARSVATFSATPLPAWRRAVCVFATKLLARALLLGLGFWTVRGRDAPAYDHAAAQKATIVSNHSSLADPCLLAYLYAPAFVAKR 171

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7051.18120.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7051.18120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FT82_ECTSI	1.420e-68	99.07	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K2Q1_9PHAE	3.810e-64	98.15	PlsC domain-containing protein n=1 Tax=Ectocarpus ...	[more]
M1UWM2_CYAM1	4.190e-6	35.62	Similar to 1-acyl-sn-glycerol-3-phosphate acyltran...	[more]
R7Q9H3_CHOCR	1.920e-5	28.45	PlsC domain-containing protein n=1 Tax=Chondrus cr...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23063	ACETYLTRANSFERASE-RELATED	coord: 2..107
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 63..81
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 82..104
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 39..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 28..38
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..27
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 105..108
None	No IPR available	SUPERFAMILY	69593	Glycerol-3-phosphate (1)-acyltransferase	coord: 16..105
None	No IPR available	TMHMM	TMhelix		coord: 39..61
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	TMHMM	TMhelix		coord: 82..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7051	contig	Ecto-sp13_S_contig7051:174..500 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7051.18120.1	mRNA_Ecto-sp13_S_contig7051.18120.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7051 174..500 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7051.18120.1 ID=prot_Ecto-sp13_S_contig7051.18120.1|Name=mRNA_Ecto-sp13_S_contig7051.18120.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
LALCAITIVPVRVVLIAVFLSSYYVLALSFMTVAPDRPWAHAISIFCVRW
ASRFLLLLLGYWTVDVKGMEENAGRRGEPRVFVSNHISFIEVLVFLHQLG
PSFVMKRT*