prot_Ecto-sp13_S_contig7046.18111.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7046.18111.1
Unique Name	prot_Ecto-sp13_S_contig7046.18111.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	388

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 1.210e-184
Identity = 313/328 (95.43%), Postives = 315/328 (96.04%), Query Frame = 0

Query:   24 MSEDADMKDAPEGVKAEEAEPMEKEAKNGDDMIPXXXXXXXXXXXXXASSGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKTLL 351
            MSEDADMKDAPEGVKAEEAEP EKEAKNGDD + XXXXXXXXXXXXX  SGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEA+RRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGA XXXXX   PPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEE SAVDRRAVETFSTMKNLAINSSQF DDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGV WHP AYSSDKTLL
Sbjct:    1 MSEDADMKDAPEGVKAEEAEPKEKEAKNGDDKMXXXXXXXXXXXXXXXXSGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXX---PPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPEAYSSDKTLL 325

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA)

HSP 1 Score: 210 bits (535), Expect = 4.260e-59
Identity = 128/270 (47.41%), Postives = 168/270 (62.22%), Query Frame = 0

Query:   74 GSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAA 343
            G+ A++ A  +GNINIH    TE+M+LS  S+E Q +HA +L++VEA RRARTM VPT  E+VA+ LR+LGQP+RLFSE +AD+RERLR  +A  +++ E    +  ++A              EPA  A              K EVVYT A+  L+EAR  IA+ SF  A  RLA AKRRR     ASA D  A    + +K L IN S  GD+RPLSA++VSPDG  VAS +W+ + KLW++++L    V RGH ER+TGVAWHP A
Sbjct:   28 GASAVEKARASGNINIHDIAQTEVMELSAASREEQDKHAEMLRKVEAHRRARTMAVPTLPEEVARALRRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLA------------AAEPAKAAAAAVEEG-------KAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMKDLRPCGVFRGHKERLTGVAWHPRA 278

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A7S2WFU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFU9_9STRA)

HSP 1 Score: 195 bits (495), Expect = 7.560e-54
Identity = 124/275 (45.09%), Postives = 164/275 (59.64%), Query Frame = 0

Query:   75 SDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRG---HSERVTGVAWHPAAYSS 346
            S A++AAV+AGNINI +    E+++LS  S + Q  HA LL++VEAERRAR++VVPT  E+V ++LR +GQPVRLF EN+ADIRERLR FIA                         + Q+ G+ A G          P A +K   VY+ AS  L+EAR  I   S      R+AG KRRR + EE + VD  A ET+  M+ LAI++SQF D+RPL A + +P    VAS S    +KLWD E+LE + +L G   H+ER TG+AWHP A+ S
Sbjct:   17 SAALQAAVRAGNINIAEGGKMEVLELSATSLDEQDRHAVLLRRVEAERRARSIVVPTNPEEVRQQLRSIGQPVRLFGENLADIRERLREFIA-------------------------RRQLDGDEAPGMLTEPMEEDKPKAPEKKADVYSEASADLVEARQRIFDYSSTHTVERMAGVKRRRESAEERARVDESAKETYKDMRALAISASQFADERPLGACRCAPHADVVASASLAPYIKLWDTESLESKGILGGPGAHTERATGLAWHPQAFGS 266

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A2P4X876_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X876_9STRA)

HSP 1 Score: 174 bits (440), Expect = 7.850e-47
Identity = 111/284 (39.08%), Postives = 171/284 (60.21%), Query Frame = 0

Query:   71 ASSGSDA--IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIA--TMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 349
            +SSG  A  ++AA++AGN+N+     TE+++LSE S+ AQ++HA+LL+++EAE+RAR + VPT  E+V ++LRQLG+P+ LF E  AD RERLR  ++  E+E EE   +  ++A       +++  G   +  A             ++ ++ Y P  ++ L  ARAAI   T +   A+ +    +R+    E A  VD+ A E ++T   +A  +SQ GD RPL++++ S DG  VA+GSW+ LVK+WD  +    KV RGH +RVTGVAWHP    S+ T
Sbjct:   28 SSSGRMASNLEAAIRAGNVNVSDNVETEVLELSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLA---DIQKQEVGTGAGESGAATREERRAGRYTKPQEDQLFYVPIKNEKLKSARAAIFAHTTTVVGARLKRERQERQMSAEERARTVDQHAAELYATALKMANIASQNGDVRPLASVRFSADGNHVATGSWSSLVKVWDASSANEVKVFRGHEDRVTGVAWHPNNVFSEMT 308

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: W2R6V2_PHYPN (SFM domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R6V2_PHYPN)

HSP 1 Score: 177 bits (448), Expect = 9.210e-47
Identity = 112/278 (40.29%), Postives = 166/278 (59.71%), Query Frame = 0

Query:   75 SDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIATMSFGRAKSRLAGAKR--RRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 349
            S  ++AA++AGN+N+     TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT  E+V ++LRQLG+P+ LF E  AD RERLR  ++  E+E EE   +  ++A        + Q  G  AAGA         P   ++ ++ Y P  ++AL   RA I   +     +RL   ++  R    E A  +D  A E ++T   +A  +SQ GD RPL++++ S DG  VA+GSW+ LVK+WD  N    KV RGH +RVTGVAWHP +  S+ T
Sbjct:   34 SSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHEVLADI------QRQDAGAGAAGAEGAARKATKP---QEDQLFYVPIKNEALKGVRATIFAHTASVVGTRLKRERQEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWDATNANEVKVFRGHEDRVTGVAWHPTSAFSEMT 302

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A3R7GQX6_9STRA (SFM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQX6_9STRA)

HSP 1 Score: 177 bits (450), Expect = 5.540e-46
Identity = 115/277 (41.52%), Postives = 167/277 (60.29%), Query Frame = 0

Query:   78 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAP--KPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIA--TMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 349
            ++ A++AGN+N+     TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT  E+V ++LRQLG+P+ LF E  AD RERLR  ++  E+E EE   +  ++A   K   VP     GGE  AG           P  ++ E+ Y P  +D L + RAAI   T S   A+ +    +++    E A  VD  A E ++T   +A  +SQ GD RPL++++ S DG  VA+GSW+ LVK+WD  N    KV RGH +RVTGVAWHP+   S+ T
Sbjct:   40 LETAMRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLRGILSQLELEAEETGFVHQVLADIQKQGAVPG----GGETIAGETGAEADQSDKP--QEDELFYVPIKNDQLKKVRAAIFDHTTSIVGARLKRERQEKQMSEEERARTVDHHAAELYATTLRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDATNAAEIKVFRGHEDRVTGVAWHPSNTFSEMT 310

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A662XLR5_9STRA (SFM domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLR5_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.820e-46
Identity = 121/279 (43.37%), Postives = 172/279 (61.65%), Query Frame = 0

Query:   78 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAG--AXXXXXXXXXPPAAKKVE--VVYTPASDALLE-ARAAIATMSFGRAKSRLAGAKRRR--GTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 349
            ++AA++AGN+N+     TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT  ++V ++LRQLG+PV LF E  AD RERLR  ++  E+E EE   +  ++A          + G  P AG  A XXXXXXXX    K  E  + Y P  +  L+ ARAAI   S     +RL   ++ +     E   AVDR A E ++T   +A  +SQ GD RPL++++ SPDG  VA+GSW+ LVK+WD  +    KV RGH +RVTG+AWHP    S+ T
Sbjct:   43 LEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVDEVIRRLRQLGEPVTLFGERPADRRERLRELLSRLELEAEETGFVHQVLADI-------QKQGSAPGAGEEAAXXXXXXXXXXXXKPQEDQLFYVPIKNVELKNARAAIFAHSVSAGSARLKRERQEKQLSAEERTRAVDRHAAELYATAAKMANIASQNGDVRPLASVRYSPDGAHVATGSWSSLVKVWDATSAVEVKVFRGHEDRVTGLAWHPTNVFSEMT 314

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: G4ZDF0_PHYSP (SFM domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZDF0_PHYSP)

HSP 1 Score: 172 bits (435), Expect = 7.340e-45
Identity = 109/276 (39.49%), Postives = 165/276 (59.78%), Query Frame = 0

Query:   78 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAG-AXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIA--TMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 349
            ++AA++AGN+N+     TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT  E+V ++LRQLG+P+ LF E  AD RERLR  ++  E+E EE     G V    + + ++    G PA G A             ++ ++ Y P  +D L  ARAA+   T S   A+ +    +++    E A  +D  A E ++T   +A  +SQ GD RPL++++ S DG  VA+GSW+ LVK+WD  N    KV RGH +RV+ VAWHP+   S+ T
Sbjct:   37 LEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEET----GFVHQVLADIQKQDGGAGAPAEGTAAGDEGAAGQASKPQEDQLFYVPIKNDGLKTARAAVFAHTTSVVGARLKRERQEKQMSAEERARTMDHHAAELYATALRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDANNAAEVKVFRGHEDRVSAVAWHPSNTFSEMT 308

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A3M6VKG6_9STRA (SFM domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKG6_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.020e-44
Identity = 115/282 (40.78%), Postives = 166/282 (58.87%), Query Frame = 0

Query:   78 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAP--KPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIATMSFGRAKSRLAGAK-------RRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 349
            ++AA++AGN+N+     TE+++LSE S+  Q++HA LL+++EAE+RAR +VVPT  E V ++LRQLG+P+ LF E  AD RERLR  ++  E+E+EE   +  ++A   +  F       G E  AG              ++ ++ Y P  +D L   RAAI    F  A SR+ GA+       R R   E A  VD  A E ++T   +A  +SQ GD RPLS+++ S DG  VA+GSW+ LVK+WD  +    KV RGH +R+TGVAWHP+   S+ T
Sbjct:   37 LEAAIRAGNVNVSDNVETEVLELSESSRAVQEKHAHLLRRIEAEKRARNIVVPTIVEVVIRRLRQLGEPITLFGERPADRRERLREILSRLELEEEETGFVHQVLADIQQQGF---GADAGVEKTAGRGETALDNVTK--LEENQLFYVPIQNDRLKNVRAAI----FSHA-SRVVGARLKRERQERNRSPEERARTVDHHAAELYTTALKMANIASQNGDVRPLSSVRYSADGAHVATGSWSSLVKIWDATSANEVKVFRGHEDRITGVAWHPSYTLSEMT 308

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BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE)

HSP 1 Score: 171 bits (433), Expect = 1.370e-44
Identity = 111/282 (39.36%), Postives = 164/282 (58.16%), Query Frame = 0

Query:   71 ASSGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTP-ASDALLEARAAIATMSFGRAKSRLAGAKRRRG--TPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 349
            AS+ + + + A++ GN+N+     TE+++LSE S+ AQ++HA+LL++VEAE+RAR + VPT  E+V +KLRQLG+P+ LF E  AD RERLR  ++  ++E EE   +  +              G E AAGA            A + ++ Y P  ++ + + RA I   +     +RL   ++ R     E A  VD+ A   +S  + +A  +SQ GD RP+SA++ S DGG VA+GSW+ LVK+WD  N    KV RGH +RVTGVAWHP    S+ T
Sbjct:   27 ASTVNASGEVAIRVGNVNVSDAVETEVLELSESSRAAQEKHAQLLRRVEAEKRARNVAVPTVVEEVIRKLRQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDIEKQEIAADAAGDERAAGAGETATGKLS--RAHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWDATNANEVKVFRGHEDRVTGVAWHPTKAFSEMT 306

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LGI0_ECTSI	1.210e-184	95.43	SFM domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835YL38_9STRA	4.260e-59	47.41	Quinon protein alcohol dehydrogenase-like superfam...	[more]
A0A7S2WFU9_9STRA	7.560e-54	45.09	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A2P4X876_9STRA	7.850e-47	39.08	U4/U6 small nuclear ribonucleoprotein Prp4 (Fragme...	[more]
W2R6V2_PHYPN	9.210e-47	40.29	SFM domain-containing protein n=14 Tax=Phytophthor...	[more]
A0A3R7GQX6_9STRA	5.540e-46	41.52	SFM domain-containing protein n=2 Tax=Phytophthora...	[more]
A0A662XLR5_9STRA	5.820e-46	43.37	SFM domain-containing protein n=2 Tax=Nothophytoph...	[more]
G4ZDF0_PHYSP	7.340e-45	39.49	SFM domain-containing protein n=5 Tax=Phytophthora...	[more]
A0A3M6VKG6_9STRA	1.020e-44	40.78	SFM domain-containing protein n=2 Tax=Peronospora ...	[more]
M4B2G3_HYAAE	1.370e-44	39.36	SFM domain-containing protein n=1 Tax=Hyaloperonos...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..124
None	No IPR available	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 85..388
None	No IPR available	PANTHER	PTHR19846:SF0	U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4	coord: 85..388
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 131..183 e-value: 0.0028 score: 26.9
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 136..163 e-value: 1.6E-10 score: 40.4
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 278..317 e-value: 0.0092 score: 25.2 coord: 320..364 e-value: 2.5E-6 score: 37.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 292..317 e-value: 0.065 score: 14.1 coord: 325..364 e-value: 5.4E-6 score: 27.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 327..373 score: 13.75
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 285..326 score: 9.539
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 256..388 e-value: 7.9E-29 score: 103.1
IPR036285	PRP4-like superfamily	GENE3D	1.10.720.150		coord: 101..181 e-value: 8.6E-8 score: 33.5
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 114..169
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 351..365
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 285..388 score: 22.491
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 285..388

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7046	contig	Ecto-sp13_S_contig7046:2..6065 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7046.18111.1	mRNA_Ecto-sp13_S_contig7046.18111.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7046 2..6065 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7046.18111.1 ID=prot_Ecto-sp13_S_contig7046.18111.1|Name=mRNA_Ecto-sp13_S_contig7046.18111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
HRPRWTATHCTASQLFHDHRATAMSEDADMKDAPEGVKAEEAEPMEKEAK
NGDDMIPPPASAAGGANNQSASSGSDAIKAAVKAGNINIHQQEHTEIMDL
SEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLF
SENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPA
AGAAGAAGAAGAPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLA
GAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPD
GGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKTL
LATGAADKTAKLWDCHTGECVQTFHGHAGRLARVGFHP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014906	PRP4-like
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036285	PRP4-like_sf
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf