prot_Ecto-sp13_S_contig7045.18110.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7045.18110.1
Unique Nameprot_Ecto-sp13_S_contig7045.18110.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length527
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7045.18110.1 vs. uniprot
Match: A0A6H5JGC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC6_9PHAE)

HSP 1 Score: 562 bits (1449), Expect = 1.480e-195
Identity = 369/439 (84.05%), Postives = 381/439 (86.79%), Query Frame = 0 
Query:    1 MPQHRDK-----AAVSFLLVVLGIAALCIAAVYLRASTLHDREIKISAYEETISEWTAFRPTFARLSINVTAHFGVAPVNTTSPGLDPNPPPPGTPLALVVSEDADPIHDEEGDAGGLPNYVPLKLERGVAPPPWRTARRFPPPEEDSQEDSQXXXXXXXXXXXXXXPNEVSXXEGGXXXXXXXXXXXXXXXDDEGLATSGTATSSGDVGGGXXXXXXXXXXXXXXXXXRLESGGSGRENVRTGDESPAAAAQAPWPFSDVVAEGASVGEGGEQQSRTSGSDGRRKIDTLQDEEGTVGEEXXXXXXXDGLAAGATLPPGFIPEAAFDDAPSVRFVFSARLEPAPTSSKGDKKGPQGG-GGANGGRERLLL-ESXXXXXXXXXXXXXXXXETEDGRRRMKKGASAAAPVLAEMVTEWTPLTRIREEHAPMPAPETKCMQV 432
            MP+ R +     AAVSFLL++LGIAALCIAAVYLRASTLHDREIKISAYEETISEWTAFRPTFARLSINVTAHFGVAPVNTTSPGLDPNPPPPGTPLAL VSEDADPIHDEEGDAGGLPNYVPLKLERGVAPPPWRTARRFPPP+E+SQEDS XXXXXXXXX     P    XX   XXXXXXXXXXXX   DDEGL TSGTATSSGDVG   XXXXXXXXXXXXX   RLESGGSGRENVRTGDESPAA A+APWP SDVVAEGASVGEGGEQQSRTSGS+GRR++D L DEEG VGEEXXXXXXX  LAA ATLPPGFIPEAAFDDAPSVRFVFSARLEPAPTSSKG KKG QGG GGANGGR RLLL +         XXXXXXXX   DGRRRMKK  +AAAPVLAEMVTEWTPLTRIREEHAPMPAPETKCMQV
Sbjct:   31 MPRARYENEGPPAAVSFLLIILGIAALCIAAVYLRASTLHDREIKISAYEETISEWTAFRPTFARLSINVTAHFGVAPVNTTSPGLDPNPPPPGTPLALAVSEDADPIHDEEGDAGGLPNYVPLKLERGVAPPPWRTARRFPPPQENSQEDSXXXXXXXXXXV----PXXXXXXXXXXXXXXXXXXXXXEARDDEGLVTSGTATSSGDVG---XXXXXXXXXXXXXWRRRLESGGSGRENVRTGDESPAAEAEAPWPLSDVVAEGASVGEGGEQQSRTSGSEGRRRVDALGDEEGNVGEEXXXXXXXXXLAAAATLPPGFIPEAAFDDAPSVRFVFSARLEPAPTSSKGGKKGFQGGDGGANGGRGRLLLLQPEEDGKARWXXXXXXXXXXXDGRRRMKKAPAAAAPVLAEMVTEWTPLTRIREEHAPMPAPETKCMQV 462
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BLAST of mRNA_Ecto-sp13_S_contig7045.18110.1 vs. uniprot
Match: D7G7N3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7N3_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 4.700e-11
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 0 
Query:  443 MCEVYERLSKVCVQVHVDDSKGEISFAPVAEIGSGDSSSG 482
            MCEVYERLS VCVQVHVDD+ GEISFAPVAEIGSGDSSSG
Sbjct:    1 MCEVYERLSTVCVQVHVDDNNGEISFAPVAEIGSGDSSSG 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7045.18110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGC6_9PHAE1.480e-19584.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7N3_ECTSI4.700e-1192.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..526
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7045contigEcto-sp13_S_contig7045:139..5207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7045.18110.1mRNA_Ecto-sp13_S_contig7045.18110.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7045 139..7068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7045.18110.1 ID=prot_Ecto-sp13_S_contig7045.18110.1|Name=mRNA_Ecto-sp13_S_contig7045.18110.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=527bp
MPQHRDKAAVSFLLVVLGIAALCIAAVYLRASTLHDREIKISAYEETISE
WTAFRPTFARLSINVTAHFGVAPVNTTSPGLDPNPPPPGTPLALVVSEDA
DPIHDEEGDAGGLPNYVPLKLERGVAPPPWRTARRFPPPEEDSQEDSQED
SQEDSQEGSEEGPNEVSEEEGGQPASEDGGDAAREAGDDEGLATSGTATS
SGDVGGGGSAGGAGGGRRWRRWRRRLESGGSGRENVRTGDESPAAAAQAP
WPFSDVVAEGASVGEGGEQQSRTSGSDGRRKIDTLQDEEGTVGEEEGGGE
EDDGLAAGATLPPGFIPEAAFDDAPSVRFVFSARLEPAPTSSKGDKKGPQ
GGGGANGGRERLLLESEEEGKARWRWRRRRRGETEDGRRRMKKGASAAAP
VLAEMVTEWTPLTRIREEHAPMPAPETKCMQVFGGVHNYKTKMCEVYERL
SKVCVQVHVDDSKGEISFAPVAEIGSGDSSSGDGVGGEETGEQTEQEERR
RRRRKRRRHDMGAIPATLGLRGATLW*
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