prot_Ecto-sp13_S_contig7043.18104.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7043.18104.1
Unique Nameprot_Ecto-sp13_S_contig7043.18104.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7043.18104.1 vs. uniprot
Match: Q8QNB9_ESV1K (EsV-1-165 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB9_ESV1K)

HSP 1 Score: 188 bits (477), Expect = 3.410e-60
Identity = 93/104 (89.42%), Postives = 101/104 (97.12%), Query Frame = 0 
Query:    1 MDWICCLRKK-RMRAAYDALRQEPESPAEEHKPAQYISASLDSEYDLENFHLRKTLTSLYKKVSEWSLPKERKMNLFTVNEEEHDFLMNDIEADNFDDVVDEKI 103
            MDWICCLRKK R+R AYDALR++PESP+EEH+PAQYISASLDSEYDLENFHL++TLTSLYKKVSEWSLPK+RKMNLFTVNEEEHDFLMNDIE DNFDDVVDEKI
Sbjct:    1 MDWICCLRKKKRLREAYDALRKDPESPSEEHEPAQYISASLDSEYDLENFHLKRTLTSLYKKVSEWSLPKKRKMNLFTVNEEEHDFLMNDIEVDNFDDVVDEKI 104
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BLAST of mRNA_Ecto-sp13_S_contig7043.18104.1 vs. uniprot
Match: D8LPI4_ECTSI (EsV-1-165 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI4_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.920e-53
Identity = 91/107 (85.05%), Postives = 98/107 (91.59%), Query Frame = 0 
Query:    1 MDWICCLR-KKRMRAAYDALR--QEPESPAEEHKPAQYISASLDSEYDLENFHLRKTLTSLYKKVSEWSLPKE-RKMNLFTVNEEEHDFLMNDIEADNFDDVVDEKI 103
            M WICCLR KKR+R AYDALR  +E ESPAE+H+PAQY+SASLDSEYDLENFHL+ TLTSLYKKVSEWSLPK+ RKMNLFTVNEEEHDFLMNDIEAD FDDVVDEKI
Sbjct:    1 MTWICCLRNKKRLREAYDALRHERESESPAEDHEPAQYVSASLDSEYDLENFHLKNTLTSLYKKVSEWSLPKQKRKMNLFTVNEEEHDFLMNDIEADIFDDVVDEKI 107
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7043.18104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNB9_ESV1K3.410e-6089.42EsV-1-165 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPI4_ECTSI1.920e-5385.05EsV-1-165 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7043contigEcto-sp13_S_contig7043:4483..4794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7043.18104.1mRNA_Ecto-sp13_S_contig7043.18104.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7043 4483..4794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7043.18104.1 ID=prot_Ecto-sp13_S_contig7043.18104.1|Name=mRNA_Ecto-sp13_S_contig7043.18104.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
MDWICCLRKKRMRAAYDALRQEPESPAEEHKPAQYISASLDSEYDLENFH
LRKTLTSLYKKVSEWSLPKERKMNLFTVNEEEHDFLMNDIEADNFDDVVD
EKI*
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