prot_Ecto-sp13_S_contig1213.1809.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1213.1809.1
Unique Name	prot_Ecto-sp13_S_contig1213.1809.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	212

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: D7FX86_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX86_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 8.320e-141
Identity = 197/205 (96.10%), Postives = 200/205 (97.56%), Query Frame = 0

Query:    1 MGFSFVFSAALFACFSFISSAQSPARTTAPVPLPSSCPSPTTGPEQQQDGDAWTGMPGSITERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDP 205
            MG SFVFSAALFAC S IS AQSPARTTAPVPLPSSCPSPTTGPEQQQDGDAWTGMPGSITERSFFAIKPDGLQRGLVG+++SRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREI LWFSREETVQWGRATDP
Sbjct:    1 MGVSFVFSAALFACLSCISFAQSPARTTAPVPLPSSCPSPTTGPEQQQDGDAWTGMPGSITERSFFAIKPDGLQRGLVGEVMSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIELWFSREETVQWGRATDP 205

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: A0A835Z9B5_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B5_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.970e-63
Identity = 96/156 (61.54%), Postives = 118/156 (75.64%), Query Frame = 0

Query:   53 WTGMPGSITERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPWIS 208
            +TG PG++ ERSF AIKP+GLQRGLVGD+++RFERKG KLV LK+  P    V +HY EH  K FF  L+ +MCSGP+V MVWEG NVI GGR++LG T+PLEA  GTIRGDLC  + RNLVHASD P+SA REI LWFS  E   WGR ++ +++
Sbjct:   38 YTGSPGTLAERSFVAIKPEGLQRGLVGDVITRFERKGLKLVALKLEQPTPAKVRQHYAEHEGKPFFAGLVRHMCSGPLVLMVWEGPNVIEGGRRMLGKTDPLEAEPGTIRGDLCVCSTRNLVHASDAPDSALREIRLWFSEAELAPWGRTSEEYLT 193

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: E4YWL7_OIKDI (Nucleoside diphosphate kinase n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4YWL7_OIKDI)

HSP 1 Score: 202 bits (514), Expect = 5.030e-63
Identity = 89/151 (58.94%), Postives = 120/151 (79.47%), Query Frame = 0

Query:   59 SITERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPWISK 209
            S  ER+F A+KPD LQRGLVGD+++RFE+KG++L+GLK++ P R+LVE+HYEEH  + F+E L++YM SGP+VA VW+G N+I+  R LLGAT+P +A  GTIRGDL T  GRNLVHASD P +A REI+LWF+ +E   W R+ +PWI++
Sbjct:   22 SCMERTFIALKPDTLQRGLVGDIINRFEKKGFQLLGLKLVQPPRELVEKHYEEHLGRPFYEGLVNYMTSGPIVASVWQGKNIISSSRSLLGATDPSKAAPGTIRGDLATQVGRNLVHASDSPVNAEREISLWFAAKEIENWSRSLEPWINE 172

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: A0A5J6Q2D9_9SYNE (Nucleoside diphosphate kinase n=1 Tax=Synechococcus sp. RSCCF101 TaxID=2511069 RepID=A0A5J6Q2D9_9SYNE)

HSP 1 Score: 200 bits (508), Expect = 2.000e-62
Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 0

Query:   61 TERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPW 206
            TER+F AIKPDG+QRGLV ++L RFERKG+KLV LK LTPGR L E+HYE H+ + FF  L+D+M SGPVVAMVWEG+NVIA GRK++GAT P EA  GTIRGD   + GRN+VH SDGPE+A  EI LWF  EE  +W  +   W
Sbjct:    3 TERTFIAIKPDGVQRGLVAEILGRFERKGFKLVALKQLTPGRDLAEKHYEVHSSRPFFSGLVDFMTSGPVVAMVWEGNNVIACGRKMIGATKPHEAEPGTIRGDFAVDIGRNIVHGSDGPETAAFEIGLWFRPEELNEWSPSDQTW 148

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: UPI000F5BD8F7 (nucleoside-diphosphate kinase n=1 Tax=Staphylospora marina TaxID=2490858 RepID=UPI000F5BD8F7)

HSP 1 Score: 199 bits (505), Expect = 4.860e-62
Identity = 85/146 (58.22%), Postives = 111/146 (76.03%), Query Frame = 0

Query:   62 ERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPWI 207
            E++F  +KPDG+QRGL+G+++SRFE+KGW+LVG K +T  R+L E+HY EH +K FF +L+D++ SGPV AMVW+GHNVIAG R+++G TNP +A  GTIRGD   N   N+VH SD PESA REIALWF  EE V W +  + WI
Sbjct:    2 EKTFIMVKPDGVQRGLIGEVVSRFEKKGWQLVGAKFMTVSRELAEKHYAEHKEKPFFGELVDFITSGPVFAMVWQGHNVIAGARQMMGKTNPADAAPGTIRGDFGVNVAMNIVHGSDSPESAEREIALWFGNEELVNWEKTINKWI 147

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: A0A812N0D1_9DINO (Nucleoside diphosphate kinase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812N0D1_9DINO)

HSP 1 Score: 197 bits (502), Expect = 9.890e-61
Identity = 88/154 (57.14%), Postives = 115/154 (74.68%), Query Frame = 0

Query:   54 TGMPGSITERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPWI 207
            TG+PG+  ER+F A KPD +QR LVG+++ RFE KGWKLVGLKM+ P ++L   HY + + K FF+ L+D+  SGP+VAMVWEG N I GGRKL+G TNPL++  G+IRGDLC   GRN++H SDGPESA+ EIA WF+ EE V++    + WI
Sbjct:   51 TGVPGTAKERTFIACKPDAVQRKLVGEIIRRFEAKGWKLVGLKMVHPTKELASAHYADLSSKPFFDGLVDFFSSGPIVAMVWEGTNCIKGGRKLMGTTNPLDSTPGSIRGDLCVQVGRNIIHGSDGPESAQAEIANWFTPEELVEYTTVDEAWI 204

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: A0A1Z4JZT7_9CYAN (Nucleoside diphosphate kinase n=1 Tax=Calothrix brevissima NIES-22 TaxID=1973478 RepID=A0A1Z4JZT7_9CYAN)

HSP 1 Score: 196 bits (499), Expect = 1.440e-60
Identity = 87/146 (59.59%), Postives = 112/146 (76.71%), Query Frame = 0

Query:   62 ERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPWI 207
            ER+F AIKPDG+QRGLV +++ RFE+KG+ LVGLK+L P R+L E+HY+ H ++ FF  L++++ SGPVVAMVWEG  VIA  RKL+GATNPL A  GTIRGDL  N GRN++H SD PE+A++E+ALWF  EE V W     PW+
Sbjct:   40 ERTFLAIKPDGVQRGLVSEIIGRFEKKGFTLVGLKLLQPSRELAEQHYDVHRERPFFAGLVEFITSGPVVAMVWEGEGVIASARKLIGATNPLNAEPGTIRGDLGINIGRNIIHGSDAPETAQKEVALWFKDEELVNWQPTVTPWL 185

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: L8GQE5_ACACA (Nucleoside diphosphate kinase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQE5_ACACA)

HSP 1 Score: 198 bits (503), Expect = 1.680e-60
Identity = 87/158 (55.06%), Postives = 118/158 (74.68%), Query Frame = 0

Query:   54 TGMPGSITERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPWISKNL 211
            TG+PG+  ER+F AIKPDG+QRG+VG+++ RFE+KG+KLVGLK++ P +Q  E+HY + + K FF  L++Y  SGPVVAMV+EG N I  GRK++GATNP +A AG++RGDLC + GRN++H SDGPESA+ EI+LWF   E   W      W+ + L
Sbjct:   79 TGLPGTRFERTFIAIKPDGVQRGIVGEIIQRFEKKGYKLVGLKVVKPTKQFAEQHYADLSKKPFFPSLVNYFSSGPVVAMVFEGRNAIVNGRKIVGATNPADAEAGSVRGDLCIDIGRNIIHGSDGPESAKDEISLWFKEGELANWESENAKWVYEKL 236

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: UPI0004723A27 (nucleoside-diphosphate kinase n=1 Tax=Candidatus Synechococcus spongiarum TaxID=431041 RepID=UPI0004723A27)

HSP 1 Score: 195 bits (495), Expect = 1.890e-60
Identity = 93/145 (64.14%), Postives = 108/145 (74.48%), Query Frame = 0

Query:   62 ERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPW 206
            ER+F A+KPDG+QRGLV D+L RFERKG+KLVGLK+LTP R L E+HY  H ++ FF  L+ ++ SGPVVAMVWEG  VIAG R L+GAT PLEA  GTIRGDL  + GRN+VH SDGPESAR EI LWF  EE   W  A   W
Sbjct:    4 ERTFIAVKPDGVQRGLVADILGRFERKGFKLVGLKLLTPSRSLAEQHYGIHRERPFFPGLVGFITSGPVVAMVWEGAGVIAGARVLIGATKPLEAAPGTIRGDLAMDIGRNVVHGSDGPESARFEIGLWFHPEELSSWEPADQGW 148

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BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Match: A0A424HSN3_9SYNE (Nucleoside diphosphate kinase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A424HSN3_9SYNE)

HSP 1 Score: 194 bits (492), Expect = 5.380e-60
Identity = 90/149 (60.40%), Postives = 111/149 (74.50%), Query Frame = 0

Query:   62 ERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWGRATDPWISKN 210
            ERSF AIKPDG+QRGLVG+++ RFERKG+KLVGLK +TP R+L E+HY  H D+ FF  L++++ SGPVVAMVWEG  VIA  RKL+GAT PLEA  GTIRGDL  N GRN++H SD PE+A  EI LWFS  E   W  +   W +++
Sbjct:    4 ERSFVAIKPDGVQRGLVGEIIGRFERKGFKLVGLKQITPSRELAEQHYGVHKDRPFFAGLVEFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETASFEIGLWFSAAELNDWTPSDQTWRTED 152

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1213.1809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FX86_ECTSI	8.320e-141	96.10	Nucleoside diphosphate kinase n=2 Tax=Ectocarpus T...	[more]
A0A835Z9B5_9STRA	2.970e-63	61.54	Nucleoside diphosphate kinase n=1 Tax=Tribonema mi...	[more]
E4YWL7_OIKDI	5.030e-63	58.94	Nucleoside diphosphate kinase n=2 Tax=Oikopleura d...	[more]
A0A5J6Q2D9_9SYNE	2.000e-62	63.70	Nucleoside diphosphate kinase n=1 Tax=Synechococcu...	[more]
UPI000F5BD8F7	4.860e-62	58.22	nucleoside-diphosphate kinase n=1 Tax=Staphylospor...	[more]
A0A812N0D1_9DINO	9.890e-61	57.14	Nucleoside diphosphate kinase n=1 Tax=Symbiodinium...	[more]
A0A1Z4JZT7_9CYAN	1.440e-60	59.59	Nucleoside diphosphate kinase n=1 Tax=Calothrix br...	[more]
L8GQE5_ACACA	1.680e-60	55.06	Nucleoside diphosphate kinase n=1 Tax=Acanthamoeba...	[more]
UPI0004723A27	1.890e-60	64.14	nucleoside-diphosphate kinase n=1 Tax=Candidatus S...	[more]
A0A424HSN3_9SYNE	5.380e-60	60.40	Nucleoside diphosphate kinase n=3 Tax=Cyanobacteri...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 64..86 score: 58.91 coord: 149..165 score: 64.23 coord: 172..191 score: 62.26 coord: 108..127 score: 43.63 coord: 128..145 score: 63.89
IPR001564	Nucleoside diphosphate kinase	HAMAP	MF_00451	NDP_kinase	coord: 61..196 score: 32.565
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 61..198 e-value: 4.2E-77 score: 272.1
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 62..195 e-value: 6.6E-50 score: 168.6
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 59..211 e-value: 5.7E-59 score: 200.3
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 61..207
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 61..208
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 61..208
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..211
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.812
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 172..180

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1213	contig	Ecto-sp13_S_contig1213:8590..12027 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1213.1809.1	mRNA_Ecto-sp13_S_contig1213.1809.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1213 8590..12027 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1213.1809.1 ID=prot_Ecto-sp13_S_contig1213.1809.1|Name=mRNA_Ecto-sp13_S_contig1213.1809.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MGFSFVFSAALFACFSFISSAQSPARTTAPVPLPSSCPSPTTGPEQQQDG
DAWTGMPGSITERSFFAIKPDGLQRGLVGDLLSRFERKGWKLVGLKMLTP
GRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRKLLGA
TNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIALWFSREETVQWG
RATDPWISKNL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR034907	NDK-like_dom
IPR036850	NDK-like_dom_sf
IPR023005	Nucleoside_diP_kinase_AS