prot_Ecto-sp13_S_contig7038.18089.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7038.18089.1
Unique Nameprot_Ecto-sp13_S_contig7038.18089.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length326
Homology
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE)

HSP 1 Score: 611 bits (1576), Expect = 1.810e-218
Identity = 321/326 (98.47%), Postives = 323/326 (99.08%), Query Frame = 0
Query:    1 MVSTRRSARLLCLSCALVEASGFVYSLPKVHQLRRQQQRSQQQHQHQLGAMGSQRRPAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            M STRRSARLLCLSCAL EA GF+YSLPKVHQLRRQQQRSQQQHQHQLGAMGSQRRPAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEV+GDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK
Sbjct:    1 MSSTRRSARLLCLSCALAEALGFIYSLPKVHQLRRQQQRSQQQHQHQLGAMGSQRRPAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVSGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA)

HSP 1 Score: 360 bits (923), Expect = 1.930e-120
Identity = 179/257 (69.65%), Postives = 216/257 (84.05%), Query Frame = 0
Query:   70 MALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            MALDDFV+ QL GI+R++NE+TERLGDPDVLA+ K +ME+S++RA +E +V  + EY  A   L GA EMF ES+G   DAE++EMAREE+RDLE  ME +E  +KL+LLPTDPND RNVMLEIRAGTGGDEAA+WA +LL VY+KYA E GW+L+V+E A  + GGF++++AEV GD VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVA+MPEVDEV V I P DI++ TAR+GGSGGQNVNKVE+AVDLFHK
Sbjct:    1 MALDDFVVRQLGGIERSYNEMTERLGDPDVLADSKKLMEISKDRAKMEGVVTMFGEYKDALAQLGGATEMFQESAG---DAELREMAREEMRDLEARMERMEVDLKLMLLPTDPNDERNVMLEIRAGTGGDEAAIWAGDLLNVYRKYATEMGWTLRVVEEAAADMGGFKSIVAEVRGDAVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEVDEVTVRIDPGDIDMHTARAGGSGGQNVNKVETAVDLFHK 254          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK)

HSP 1 Score: 328 bits (842), Expect = 1.670e-107
Identity = 167/270 (61.85%), Postives = 209/270 (77.41%), Query Frame = 0
Query:   57 PAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            P   + + S  L MA+  ++ ++L GI++TFN+LT  L DPDVL + K +M++S+ER+ +EEIV  + EY     DL GAKE+F+ES+G   D EM+EMAR+EI + E VM+ L+ K+K+LLLPTDPND RN MLEIRAGTGGDEA +WA +L+ VYKKYA  QGW+  +IE +  + GG ++   EV G+ VYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEV V I P+DIE+ TARSGG+GGQNVNKVE+A DLFHK
Sbjct:   36 PHPVARKTSGGLKMAIPSYMQDKLKGIEQTFNQLTNSLADPDVLNDSKQLMKISKERSKLEEIVEAFQEYKSREADLTGAKELFSESAG---DPEMREMARDEIDECETVMDELQEKLKILLLPTDPNDERNCMLEIRAGTGGDEAGIWAGDLVEVYKKYAQTQGWACTLIEESAADMGGVKSCTLEVRGEAVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDPKDIELTTARSGGAGGQNVNKVETAADLFHK 302          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A140ECK3_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140ECK3_9STRA)

HSP 1 Score: 324 bits (830), Expect = 9.580e-106
Identity = 165/261 (63.22%), Postives = 204/261 (78.16%), Query Frame = 0
Query:   66 RALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            R+L MALD FV  +L  I RT++ELTERLGDPDV+ANP  +M+V+QER  +EE+V  Y ++ K  ED+ GAK++F E   AG D E+KEMAR EI+DLE     +E ++ +L+LP DP D+RNVMLEIRAGTGG EA L+A  L+ VY +YA  QGW ++VIE +  + GG++  + E+ GDKVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVAIMPEVD+V V I  +DIE+ TARSGGSGGQNVNKVE+AVDL HK
Sbjct:   42 RSLAMALDPFVQSKLDSIKRTYHELTERLGDPDVIANPNSLMQVNQERMKIEEVVLSYQKWQKLGEDMVGAKQLFNE---AGNDVELKEMARAEIKDLEAQQGEIEARLVVLMLPQDPLDDRNVMLEIRAGTGGSEAGLFAGNLVDVYTRYATAQGWRVRVIEDSRNDEGGYKNAVLEIQGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVQVQIDAKDIEMHTARSGGSGGQNVNKVETAVDLLHK 299          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A448Z911_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z911_9STRA)

HSP 1 Score: 322 bits (824), Expect = 6.590e-105
Identity = 166/271 (61.25%), Postives = 209/271 (77.12%), Query Frame = 0
Query:   56 RPAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            RPAA S R +     ALD+ ++ +L  I R++N LTERLGDPDVL + KL+ +V  +RAS EE+V  Y EYT   E+LEGAKE+F +   AG D EMKEMAR E++++E  +E +E K+K+LLLP DPND+RNVMLEIRAGTGG EA+++  +LL VY+KY   QGWS  +I+ +  + GG++ ++ EV GDKVYSKLK+EAGVHRVQRVPATE+ GRVHTSTATVAIMPE DEV +NI  +DIEI T RSGG+GGQNVNKVE+AVDL HK
Sbjct:   28 RPAAASWRNTNTALGALDEGMMGRLENIKRSYNALTERLGDPDVLGDSKLLQKVMSDRASSEEVVLAYDEYTGLLEELEGAKELFQD---AGDDPEMKEMARAEMKEIEPKLEPIEDKIKILLLPKDPNDDRNVMLEIRAGTGGSEASIFVGDLLDVYRKYISSQGWSANIIDESTGDDGGYKNIVMEVKGDKVYSKLKWEAGVHRVQRVPATESAGRVHTSTATVAIMPECDEVDINIDKKDIEISTMRSGGAGGQNVNKVETAVDLLHK 295          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A4D9DHG8_9STRA (RF_PROK_I domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHG8_9STRA)

HSP 1 Score: 320 bits (819), Expect = 9.830e-105
Identity = 161/257 (62.65%), Postives = 201/257 (78.21%), Query Frame = 0
Query:   70 MALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            M LD FV  +L    RT+ ELTERLGDPDV+ANP  +M+V+QER ++EE+V  Y E+ K A D+ GAK++F E   A GD EMKEMAR EI+DLE   E +E ++ +L+LP+DP D+RNVMLEIRAGTGG EA L+A +L+ VY++Y    GW ++V+E +  + GG++  + E+ GDKVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVA+MPEVDEV V I P+DI + TARSGGSGGQNVNKVE+AVDL HK
Sbjct:    1 MTLDPFVQTKLESFSRTYKELTERLGDPDVIANPTTLMQVNQERMNIEEVVVSYQEWQKLAADMAGAKQLFNE---AAGDPEMKEMARAEIKDLEGRQEDIEEQLVVLMLPSDPLDDRNVMLEIRAGTGGSEAGLFAGDLVDVYQRYGQSLGWRVRVVEDSRNDEGGYKNAVLEIQGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVKIDPKDITLTTARSGGSGGQNVNKVETAVDLLHK 254          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A7S4F4Q1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F4Q1_CHRCT)

HSP 1 Score: 322 bits (825), Expect = 1.340e-104
Identity = 162/255 (63.53%), Postives = 205/255 (80.39%), Query Frame = 0
Query:   72 LDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            +D FVL++L  +  TF  LTERL DP++L++ + ++ V++ERA +EE V  Y +Y    E L GA+E+F E   AGGD EMKEMAREE+RDLE+ +EAL+ ++K+LLLP+DPND++NVMLEIRAGTGGDEAA+WA++LL +Y ++A EQGW  +V+  +  EAGG R    E+ GD VYSKLK+EAGVHRVQRVPATETQGR+HTSTATVAIMPEVDEV V I P+DIE+ TARSGG+GGQNVNKVE+AVDL HK
Sbjct:   80 IDRFVLDRLKLVTETFQSLTERLEDPELLSDTQEMLRVTKERAKLEETVMAYKQYLALEEQLNGARELFNE---AGGDTEMKEMAREEMRDLEDELEALDERIKVLLLPSDPNDDKNVMLEIRAGTGGDEAAIWASDLLNLYTRFAQEQGWQTRVVSLSDSEAGGCRDATIEIKGDSVYSKLKFEAGVHRVQRVPATETQGRIHTSTATVAIMPEVDEVTVTIDPKDIEMSTARSGGAGGQNVNKVETAVDLTHK 331          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A7S3P9F9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9F9_9STRA)

HSP 1 Score: 319 bits (818), Expect = 5.840e-104
Identity = 161/270 (59.63%), Postives = 209/270 (77.41%), Query Frame = 0
Query:   57 PAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            P   +   S AL MALD+ ++ +L  I R++N LTERLGDPDV+++  L+ +V  +R+  EE+V  Y EY++  EDL GA+E+F E   AG DA+M+EMAREE+++LE  +E LE +MK+L+LP DPNDNRNVMLEIRAGTGG EA+++A +LL VY+KY   QGW   +I+ +  + GG++ V+ E+ GD VYSKLK+EAGVHRVQRVPATE+QGRVHTSTATVAIMPE D+V V I P+DIE+ T RSGG+GGQNVNKVE+AVDL HK
Sbjct:   31 PVRLNLSSSTALTMALDEAMMSRLENIRRSYNALTERLGDPDVISDSNLLQKVMSDRSQSEEVVLAYEEYSQMLEDLAGARELFQE---AGDDADMREMAREEMKELEPKLEELEERMKILMLPKDPNDNRNVMLEIRAGTGGSEASIFAGDLLDVYRKYISSQGWQSNLIDESTGDDGGYKNVVLEIKGDMVYSKLKWEAGVHRVQRVPATESQGRVHTSTATVAIMPECDDVDVKIDPKDIELSTMRSGGAGGQNVNKVETAVDLLHK 297          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: K9XZS4_STAC7 (Peptide chain release factor 1 n=2 Tax=Stanieria TaxID=102115 RepID=K9XZS4_STAC7)

HSP 1 Score: 316 bits (810), Expect = 2.650e-103
Identity = 153/252 (60.71%), Postives = 202/252 (80.16%), Query Frame = 0
Query:   75 FVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            ++LE+L  +++T+ ELT RLGDPD+  NP  + ++++ R+S+EE VN Y E+ KA E+L GAKE+F E   AGGD+EM+EMA  E+  LEE +  LE+++K+LLLP DPND++N+MLEIRAGTGGDEA++WA +L+ +Y +YA  Q W++K++  ++ + GGF+  I E+ GD VYSKLK+EAGVHRVQRVP TE  GRVHTSTATVAIMPEVDEV V I P+DIE+KTARSGG+GGQNVNKVE+AVDL HK
Sbjct:    5 YLLEKLKSVEQTYQELTRRLGDPDIATNPDELQKIAKIRSSLEETVNTYEEWKKATEELAGAKEIFKE---AGGDSEMREMAALEVDQLEEKINQLESRLKILLLPRDPNDDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQNWNVKLVSESLADMGGFKEAILEIQGDSVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIELKTARSGGAGGQNVNKVETAVDLIHK 253          
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Match: A0A7S2W3G7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3G7_9STRA)

HSP 1 Score: 316 bits (810), Expect = 7.810e-103
Identity = 159/257 (61.87%), Postives = 205/257 (79.77%), Query Frame = 0
Query:   70 MALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHK 326
            MA+++F++E+L  I+RTFNELTERLGDPDV+++PKL+M ++QER+S+EE V  Y+++     +L  AKE+   S     DAEMKEMA+EE++ LE  +   E K+ +L+LP DPNDN+NV+LEIRAGTGG EA LWA +L+  Y+KYA +QGW  KV+E +  + GG +    E++G+ VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVAIMPEVDEVAV+I P+D+ I TARSGG+GGQNVNKVE+AVDL HK
Sbjct:   39 MAMNEFMVERLQSIERTFNELTERLGDPDVISDPKLMMSLTQERSSIEETVETYSQWRDMQTELGDAKELVDVSD----DAEMKEMAKEEVQTLEAGITEREDKLMVLILPKDPNDNKNVILEIRAGTGGGEACLWAGDLVSAYRKYADKQGWRFKVLEDSAGDDGGVKNAAYEISGESVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVAVHIDPKDVTITTARSGGAGGQNVNKVETAVDLLHK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7038.18089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZD5_9PHAE1.810e-21898.47RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CKN4_9STRA1.930e-12069.65Peptide chain release factor 1 n=1 Tax=Tribonema m... [more]
A0A6S9M8F3_HETAK1.670e-10761.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A140ECK3_9STRA9.580e-10663.22Plastid peptide chain release factor 1 n=1 Tax=Mon... [more]
A0A448Z911_9STRA6.590e-10561.25RF_PROK_I domain-containing protein n=1 Tax=Pseudo... [more]
A0A4D9DHG8_9STRA9.830e-10562.65RF_PROK_I domain-containing protein n=3 Tax=Monodo... [more]
A0A7S4F4Q1_CHRCT1.340e-10463.53Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3P9F9_9STRA5.840e-10459.63Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
K9XZS4_STAC72.650e-10360.71Peptide chain release factor 1 n=2 Tax=Stanieria T... [more]
A0A7S2W3G7_9STRA7.810e-10361.87Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..173
NoneNo IPR availableGENE3D3.30.160.20coord: 288..326
e-value: 4.2E-54
score: 185.1
NoneNo IPR availableGENE3D1.20.58.410coord: 76..173
e-value: 3.4E-8
score: 35.2
NoneNo IPR availableGENE3D3.30.70.1660coord: 190..287
e-value: 4.2E-54
score: 185.1
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 36..326
NoneNo IPR availablePANTHERPTHR43804:SF4PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTICcoord: 36..326
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..326
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 85..325
IPR005139Peptide chain release factorSMARTSM00937PCRF_a_2coord: 142..256
e-value: 3.0E-43
score: 159.7
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 85..281
e-value: 5.6E-67
score: 225.4
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 289..325
e-value: 7.8E-12
score: 45.2
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 305..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7038contigEcto-sp13_S_contig7038:2166..7791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7038.18089.1mRNA_Ecto-sp13_S_contig7038.18089.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7038 2166..7791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7038.18089.1 ID=prot_Ecto-sp13_S_contig7038.18089.1|Name=mRNA_Ecto-sp13_S_contig7038.18089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp
MVSTRRSARLLCLSCALVEASGFVYSLPKVHQLRRQQQRSQQQHQHQLGA
MGSQRRPAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVL
ANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDA
EMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGD
EAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVY
SKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIE
IKTARSGGSGGQNVNKVESAVDLFHK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF
IPR000352Pep_chain_release_fac_I