prot_Ecto-sp13_S_contig7037.18087.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7037.18087.1
Unique Nameprot_Ecto-sp13_S_contig7037.18087.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length382
Homology
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: D8LDP9_ECTSI (Kinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP9_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 4.130e-102
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0
Query:    1 MDLTGGTASGKGDGGGMSKTPQGGRVDGTTALPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR 161
            MDLT  TASGKGDGGGMSKTPQGGR  GT  LPLAALECAVCL LVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIA+TCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR
Sbjct:    1 MDLTRETASGKGDGGGMSKTPQGGRAGGTATLPLAALECAVCLFLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIARTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR 161          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A835ZAH9_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAH9_9STRA)

HSP 1 Score: 267 bits (682), Expect = 6.160e-84
Identity = 128/253 (50.59%), Postives = 179/253 (70.75%), Query Frame = 0
Query:   61 VCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIP--ASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 311
            +CLV TL R KK+CPTCRAVCHN A+DQPE+VM+A IA+  FP+L   RL+E + E+    ++ P+FYYNVPMFPGE L LHLFEPRY+LMM+R+++T+RRF YVPNY+NY A+IGDVALIA++ +C+F SDGR  L A LI R  + DH+VE+GT GL++C++E   DEP    +    +  V+ +       +   +GP  S++++ +GE+P  A  + FS + A VLP+   EKH+ML+  +T +RL AC
Sbjct:    1 MCLVKTLTRTKKRCPTCRAVCHNCAQDQPENVMVAQIARAAFPQLYLERLRETQTEKAALRSIHPIFYYNVPMFPGEILSLHLFEPRYRLMMRRIIDTTRRFVYVPNYTNYEASIGDVALIAEVKDCDFQSDGRCYLSATLIGRSRITDHYVEDGTHGLNYCQLETLVDEPIQPHEARFVTTLVQPI----ANFVSSVLGPIHSDVVKTHGEMPPVAREQEFSLFIAGVLPLGNAEKHSMLACTNTLERLRAC 249          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6H5KHS7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS7_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 9.070e-84
Identity = 138/287 (48.08%), Postives = 188/287 (65.51%), Query Frame = 0
Query:   35 AALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNS--AEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYV-----PNYSNYVATI---GDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIPASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 311
            + L C  CL L+ EPVSL CGH+FCRVCLV  LRR  K+CP+C A CH    AEDQP++VMLA IA++ FPEL   RL+E EAE+ KF   LP F+Y+VP+FPG++L +H FEPRYKLMM+R++NTSRRFAYV     P+ ++        G +AL A + E EFLSD RV++K KL  R TV++ FVE GT  LH+C++E   D+P    Q G A   + +LH R + +    +GPF  +++E +G +P  A   S W A++LP    +KH+++  R T  R+ AC
Sbjct:   25 SCLACPACLQLLAEPVSLPCGHTFCRVCLVKELRRKPKECPSCHATCHTRQVAEDQPQNVMLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYSVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVPSTNDDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGNLHYCQLEPFDDDPL---QEGGAGE-LTDLHTRAKTICNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRAC 307          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6U2J5U5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2J5U5_HEMAN)

HSP 1 Score: 261 bits (667), Expect = 6.920e-82
Identity = 126/291 (43.30%), Postives = 191/291 (65.64%), Query Frame = 0
Query:   24 GRVDGTTALPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGP---FMSEMIERYGEIPASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 311
            GRV+    + ++ LEC+VCL L+CEPV+  CGHSFCR CLV TLR+NKKKCP+CRA+C    E   E + L+++A+  FP+    R+ EV+AE+  + T+LP+F+YN  +FP   L L+LFEPRYK+M+ R+V +SRRFAY+P +  Y A +GD+ +IA++ + EFL+DGR  L+AK   R T+ + ++E+GTQGLH+C+V+   D   ++E    A   +EE  +   +L    +        E+  +YG  PA +E FS W +++LP+P  +KH +L+  +T +RL  C
Sbjct:    1 GRVEVDGVIEVSMLECSVCLQLLCEPVTTPCGHSFCRPCLVGTLRKNKKKCPSCRAICQIEPETHSETIALSSVAKAVFPKAYQQRILEVQAEKASWDTILPIFFYNDTLFPFSPLALNLFEPRYKVMLHRIVESSRRFAYLPKFDTYQANVGDMGVIAEITDIEFLADGRAHLQAKCRDRFTIKEAWIEDGTQGLHWCKVDLVNDGVSASESERQA---LEEAVSDCEQLFASVMARSSHLAREIESQYGSRPADSERFSFWLSSILPVPYGDKHCLLTCLNTTERLTLC 288          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A482RY16_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY16_9ARCH)

HSP 1 Score: 259 bits (663), Expect = 1.770e-81
Identity = 124/248 (50.00%), Postives = 173/248 (69.76%), Query Frame = 0
Query:   37 LECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIER-YGEIPASAESFSQW 283
            L+C++CLSLVCEP+S+SCGH+FCRVCLV  LRR+KK+CPTCR VCH SAE+  E++M+  +A    PE   +RL E E E+  +  + P+FYYN  +FPG  L L LFEPRYKLMM+R+++T+R FAYVPN++NY A +GDVAL+ +L E EFL+DGR LL+  L+SRQ + +H+VE+GTQGLH+CR+E+  D+    ++   A    ++L    R L+    G     ++E+  G  P   E+FS W
Sbjct:   37 LDCSLCLSLVCEPISISCGHTFCRVCLVKALRRHKKQCPTCREVCHVSAENAAENIMVKTLAMALDPETYRSRLLEAEGEKSSWTALYPIFYYNSILFPGNKLSLVLFEPRYKLMMRRIIDTTRSFAYVPNFTNYHARVGDVALVVELKEVEFLADGRCLLEGLLVSRQRIAEHYVEQGTQGLHYCRLESLRDDGLGEQRRQQADYLSQQL----RTLLASLGGGSSRRLLEQGLGSPPQDLENFSLW 280          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A4D9DDG8_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDG8_9STRA)

HSP 1 Score: 260 bits (664), Expect = 3.020e-80
Identity = 139/291 (47.77%), Postives = 185/291 (63.57%), Query Frame = 0
Query:   32 LPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVI-DHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIPA--SAESFSQWAAAVLPMPVRE-KHAMLSGRSTADRLVACERHLASL 318
            L L  LEC VCL L+CE V+  CGHS CR+CLV  L+R + KCP CRAVC  +AED  E  +L  +A+  FP L   RL+E   ERE    +LP+F+YN+P+FPGE+L+LHLFEPRY+LMM+R+VN SRRFAYVPNYSNY A  GD+ALIA+L E  F+ DGR  L+A++  R T+  D +VE+GT GL +CR++   DE P + +   A  +  E        I        + +++RYGE+P   + E+ S W AAVLP   R+ KH +L    T+ RL  C   L +L
Sbjct:   89 LTLGDLECGVCLGLLCEAVTTPCGHSLCRLCLVRALQR-QTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPALYEQRLEETRQEREALKLLLPIFFYNLPIFPGEALRLHLFEPRYRLMMQRIVNGSRRFAYVPNYSNYRAKAGDIALIAELKEVRFMRDGRSELEARIAGRFTIAEDPYVEDGTGGLSYCRLKELRDESPKSAEASQALRQASEKAREMAHAIFLERRDIKAVVVDRYGEMPGPQTPEALSLWIAAVLPTENRQIKHDLLVSTDTSHRLEVCMSKLQAL 378          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA)

HSP 1 Score: 246 bits (629), Expect = 8.070e-76
Identity = 128/301 (42.52%), Postives = 192/301 (63.79%), Query Frame = 0
Query:   29 TTALPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIP--ASAESFSQWAAAVLPMPVREKHA---MLSGRSTADRLVACERHLASLTTGRGR 324
            +T +    L+C++CL +VCEP+++ CGH+FCR CL   ++R KKKCP CRAVCH        +VMLANIAQ CFP+    R +E +A ++KF T LP+F+YN  +FPG  L LHLFE RY+ M+ R V+++R+F Y+PN+S+Y AT GDV L+A + ECEFLSDGR LLKA L+ R  + + +VEEGTQGLH+C+ +A  +   + ++     A V+E+HA+   ++  A G    +++   G+ P  ++A  FS W +A++ M  R   +   +L    TA+RL   +  L+ + +   R
Sbjct:   22 STRIEQDMLQCSLCLGIVCEPITIPCGHTFCRSCLYLAMQRTKKKCPNCRAVCHVDPSSHSVNVMLANIAQKCFPKEYKKRAEECKALKQKFQTTLPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRQFLYLPNFSDYKATAGDVGLLAYVDECEFLSDGRALLKATLVKRVVITNSWVEEGTQGLHYCQYQAYEETDKTVKE-----ADVKEIHAKVNVILQSAPG-LREQIVNHIGKQPPISNATQFSFWISALVTMITRAGKSGMPLLKTTKTAERLKLVKTVLSQIVSQTSR 316          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6B2LCC5_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCC5_9EUKA)

HSP 1 Score: 223 bits (569), Expect = 3.300e-67
Identity = 119/281 (42.35%), Postives = 177/281 (62.99%), Query Frame = 0
Query:   37 LECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGN----ASARVEELHARTRRLILDAIGPF-MSEMIERYGEIPASAESFSQWAAAVLP----MPVREKHAMLSGRSTADRL 308
            ++C +CL+++ EP+S+ CGH+FCR CLV   +R +KKCP CRAVC   A  Q E+V LA+I +TCFP+  A RLKEVE  ++ +   LP+F++N  +FPG  L+LHLFE RYKLM+KRV+  +R+F Y+PN++NY A+ GDV ++A+++EC FL DGR LL+A+++ R  V D +VE+GT  L +C+ E   DEP +++Q       A+  +E      +RL  + I  F + E +  + E  ++ E+ S W    L     M    K A+L   S   RL
Sbjct:    1 MDCTICLNMLVEPISVPCGHTFCRTCLVAAQQRAQKKCPVCRAVCVIDATAQKENVQLASILKTCFPKQYAERLKEVEETKKTWKQNLPIFFFNDTLFPGGVLKLHLFEERYKLMIKRVLEGNRKFVYLPNFTNYKASKGDVGVVAEVLECRFLHDGRALLQARIVERAVVADSWVEDGTGNLAYCQYELFKDEPENDDQLQELLVTANLSLERFKGFVQRL--EPIRQFTLKEQLGGFPEERSTPEAISWWLINTLSRFDGMSTSTKVALLKSNSFKWRL 279          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6V3MPG8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3MPG8_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 1.450e-66
Identity = 123/303 (40.59%), Postives = 186/303 (61.39%), Query Frame = 0
Query:   29 TTALPLAALE-----CAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRL--ILDAIGPFMSEMIERYGEIPASAES--FSQWAAAVLPMPVR---EKHAMLSGRSTADRLVACERHLASLT 319
            TTA   A++E     C +CL+LVC+P+++ CGH+FCRVCL   ++R+KKKCP CRAVCH        +VMLA IAQ CFP+    RL E + E+EKF +  P+F+YN  +FPG  L LHLFE RY+ M+ R V+++R+F Y+PN+++Y A  GDV L+A + ECEFL DGR LLKA +  R  V + +VEEGTQGLH+C+     +E  + ++        EEL+A  +++  + + +     +++   G+ P       +S W AA + M  R   +  ++L    T++RL   +R L+ ++
Sbjct:   20 TTASSSASIEADMLTCPLCLNLVCQPITVPCGHTFCRVCLYMAMQRSKKKCPNCRAVCHVEPASHAVNVMLAQIAQKCFPKQYEQRLLESKQEQEKFESTSPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRKFIYLPNFTDYKAKTGDVGLLAYIDECEFLPDGRALLKATIQKRVKVTNTWVEEGTQGLHYCQFHPYVEEDKTVDE--------EELNAVHKQVNGLFNHVPGLKDQIVHHIGKQPPLTNPVLWSFWLAAFVTMVSRSGVQSMSLLKTTKTSERLKQSKRLLSQVS 314          
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: D8LI81_ECTSI (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI81_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 2.530e-57
Identity = 103/227 (45.37%), Postives = 143/227 (63.00%), Query Frame = 0
Query:   93 MLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYV--------PNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIPASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 311
            MLA IA++ FPEL   RL+E EAE+ KF   LP F+YNVP+FPG++L +H FEPRYKLMM+R++NTSRRFAYV         N        G +AL A + E EFLSD RV++K KL  R TV++ FVE GT  LH+C++E   D+P    Q+G A   +E+LH R + +    +GPF  +++E +G +P  A   S W A++LP    +KH+++  R T  R+  C
Sbjct:    1 MLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYNVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVQSTNNDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGDLHYCQLEPFDDDPL---QDGGADE-LEDLHTRAKTMCNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRTC 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDP9_ECTSI4.130e-10295.03Kinase, putative n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835ZAH9_9STRA6.160e-8450.59PUA-like domain-containing protein n=1 Tax=Tribone... [more]
A0A6H5KHS7_9PHAE9.070e-8448.08RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6U2J5U5_HEMAN6.920e-8243.30Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A482RY16_9ARCH1.770e-8150.00RING-type domain-containing protein n=1 Tax=archae... [more]
A0A4D9DDG8_9STRA3.020e-8047.77RING-type domain-containing protein n=2 Tax=Monodo... [more]
A0A7S0CSC1_9EUKA8.070e-7642.52Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6B2LCC5_9EUKA3.300e-6742.35RING-type domain-containing protein n=1 Tax=Arcell... [more]
A0A6V3MPG8_9EUKA1.450e-6640.59Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
D8LI81_ECTSI2.530e-5745.37Lon N-terminal domain-containing protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 39..77
e-value: 2.5E-7
score: 40.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 39..78
score: 12.652
IPR003111Lon, substrate-binding domainSMARTSM00464lon_5coord: 123..317
e-value: 5.2E-5
score: 13.3
IPR003111Lon, substrate-binding domainPFAMPF02190LON_substr_bdgcoord: 123..314
e-value: 3.6E-11
score: 43.3
IPR003111Lon, substrate-binding domainPROSITEPS51787LON_Ncoord: 121..317
score: 12.724
NoneNo IPR availableGENE3D2.30.130.40coord: 108..226
e-value: 1.2E-17
score: 65.7
NoneNo IPR availablePANTHERPTHR23327RING FINGER PROTEIN 127coord: 35..316
NoneNo IPR availablePANTHERPTHR23327:SF42ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEINcoord: 35..316
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 37..96
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 39..77
e-value: 4.8E-9
score: 35.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 23..107
e-value: 1.2E-17
score: 65.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 54..63
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 123..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7037contigEcto-sp13_S_contig7037:440..6263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7037.18087.1mRNA_Ecto-sp13_S_contig7037.18087.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7037 281..7524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7037.18087.1 ID=prot_Ecto-sp13_S_contig7037.18087.1|Name=mRNA_Ecto-sp13_S_contig7037.18087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
MDLTGGTASGKGDGGGMSKTPQGGRVDGTTALPLAALECAVCLSLVCEPV
SLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQT
CFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKL
MMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAK
LISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHAR
TRRLILDAIGPFMSEMIERYGEIPASAESFSQWAAAVLPMPVREKHAMLS
GRSTADRLVACERHLASLTTGRGRVPPALSEPRDVTAVADAFTRHISDAG
HTPESVAAAVSAGPGDGSREEEGGDAGSDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR003111Lon_substr-bd
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR015947PUA-like_sf