mRNA_Ecto-sp13_S_contig7037.18087.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: D8LDP9_ECTSI (Kinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP9_ECTSI) HSP 1 Score: 310 bits (795), Expect = 1.500e-97 Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 1
Query: 160 MDLTGGTASGKGDGGGMSKTPQGGRVDGTTALPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR 642
MDLT TASGKGDGGGMSKTPQGGR GT LPLAALECAVCL LVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIA+TCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR
Sbjct: 1 MDLTRETASGKGDGGGMSKTPQGGRAGGTATLPLAALECAVCLFLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIARTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR 161
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A835ZAH9_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAH9_9STRA) HSP 1 Score: 267 bits (682), Expect = 6.900e-79 Identity = 128/253 (50.59%), Postives = 179/253 (70.75%), Query Frame = 1
Query: 340 VCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIP--ASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 1092
+CLV TL R KK+CPTCRAVCHN A+DQPE+VM+A IA+ FP+L RL+E + E+ ++ P+FYYNVPMFPGE L LHLFEPRY+LMM+R+++T+RRF YVPNY+NY A+IGDVALIA++ +C+F SDGR L A LI R + DH+VE+GT GL++C++E DEP + + V+ + + +GP S++++ +GE+P A + FS + A VLP+ EKH+ML+ +T +RL AC
Sbjct: 1 MCLVKTLTRTKKRCPTCRAVCHNCAQDQPENVMVAQIARAAFPQLYLERLRETQTEKAALRSIHPIFYYNVPMFPGEILSLHLFEPRYRLMMRRIIDTTRRFVYVPNYTNYEASIGDVALIAEVKDCDFQSDGRCYLSATLIGRSRITDHYVEDGTHGLNYCQLETLVDEPIQPHEARFVTTLVQPI----ANFVSSVLGPIHSDVVKTHGEMPPVAREQEFSLFIAGVLPLGNAEKHSMLACTNTLERLRAC 249
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6H5KHS7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS7_9PHAE) HSP 1 Score: 269 bits (688), Expect = 1.100e-78 Identity = 138/287 (48.08%), Postives = 188/287 (65.51%), Query Frame = 1
Query: 262 AALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNS--AEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYV-----PNYSNYVATI---GDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIPASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 1092
+ L C CL L+ EPVSL CGH+FCRVCLV LRR K+CP+C A CH AEDQP++VMLA IA++ FPEL RL+E EAE+ KF LP F+Y+VP+FPG++L +H FEPRYKLMM+R++NTSRRFAYV P+ ++ G +AL A + E EFLSD RV++K KL R TV++ FVE GT LH+C++E D+P Q G A + +LH R + + +GPF +++E +G +P A S W A++LP +KH+++ R T R+ AC
Sbjct: 25 SCLACPACLQLLAEPVSLPCGHTFCRVCLVKELRRKPKECPSCHATCHTRQVAEDQPQNVMLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYSVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVPSTNDDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGNLHYCQLEPFDDDPL---QEGGAGE-LTDLHTRAKTICNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRAC 307
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6U2J5U5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2J5U5_HEMAN) HSP 1 Score: 261 bits (667), Expect = 6.310e-77 Identity = 126/291 (43.30%), Postives = 191/291 (65.64%), Query Frame = 1
Query: 229 GRVDGTTALPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGP---FMSEMIERYGEIPASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 1092
GRV+ + ++ LEC+VCL L+CEPV+ CGHSFCR CLV TLR+NKKKCP+CRA+C E E + L+++A+ FP+ R+ EV+AE+ + T+LP+F+YN +FP L L+LFEPRYK+M+ R+V +SRRFAY+P + Y A +GD+ +IA++ + EFL+DGR L+AK R T+ + ++E+GTQGLH+C+V+ D ++E A +EE + +L + E+ +YG PA +E FS W +++LP+P +KH +L+ +T +RL C
Sbjct: 1 GRVEVDGVIEVSMLECSVCLQLLCEPVTTPCGHSFCRPCLVGTLRKNKKKCPSCRAICQIEPETHSETIALSSVAKAVFPKAYQQRILEVQAEKASWDTILPIFFYNDTLFPFSPLALNLFEPRYKVMLHRIVESSRRFAYLPKFDTYQANVGDMGVIAEITDIEFLADGRAHLQAKCRDRFTIKEAWIEDGTQGLHWCKVDLVNDGVSASESERQA---LEEAVSDCEQLFASVMARSSHLAREIESQYGSRPADSERFSFWLSSILPVPYGDKHCLLTCLNTTERLTLC 288
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A482RY16_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY16_9ARCH) HSP 1 Score: 259 bits (663), Expect = 1.520e-76 Identity = 124/248 (50.00%), Postives = 173/248 (69.76%), Query Frame = 1
Query: 268 LECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIER-YGEIPASAESFSQW 1008
L+C++CLSLVCEP+S+SCGH+FCRVCLV LRR+KK+CPTCR VCH SAE+ E++M+ +A PE +RL E E E+ + + P+FYYN +FPG L L LFEPRYKLMM+R+++T+R FAYVPN++NY A +GDVAL+ +L E EFL+DGR LL+ L+SRQ + +H+VE+GTQGLH+CR+E+ D+ ++ A ++L R L+ G ++E+ G P E+FS W
Sbjct: 37 LDCSLCLSLVCEPISISCGHTFCRVCLVKALRRHKKQCPTCREVCHVSAENAAENIMVKTLAMALDPETYRSRLLEAEGEKSSWTALYPIFYYNSILFPGNKLSLVLFEPRYKLMMRRIIDTTRSFAYVPNFTNYHARVGDVALVVELKEVEFLADGRCLLEGLLVSRQRIAEHYVEQGTQGLHYCRLESLRDDGLGEQRRQQADYLSQQL----RTLLASLGGGSSRRLLEQGLGSPPQDLENFSLW 280
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A4D9DDG8_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDG8_9STRA) HSP 1 Score: 260 bits (664), Expect = 2.640e-75 Identity = 139/291 (47.77%), Postives = 185/291 (63.57%), Query Frame = 1
Query: 253 LPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVI-DHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIPA--SAESFSQWAAAVLPMPVRE-KHAMLSGRSTADRLVACERHLASL 1113
L L LEC VCL L+CE V+ CGHS CR+CLV L+R + KCP CRAVC +AED E +L +A+ FP L RL+E ERE +LP+F+YN+P+FPGE+L+LHLFEPRY+LMM+R+VN SRRFAYVPNYSNY A GD+ALIA+L E F+ DGR L+A++ R T+ D +VE+GT GL +CR++ DE P + + A + E I + +++RYGE+P + E+ S W AAVLP R+ KH +L T+ RL C L +L
Sbjct: 89 LTLGDLECGVCLGLLCEAVTTPCGHSLCRLCLVRALQR-QTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPALYEQRLEETRQEREALKLLLPIFFYNLPIFPGEALRLHLFEPRYRLMMQRIVNGSRRFAYVPNYSNYRAKAGDIALIAELKEVRFMRDGRSELEARIAGRFTIAEDPYVEDGTGGLSYCRLKELRDESPKSAEASQALRQASEKAREMAHAIFLERRDIKAVVVDRYGEMPGPQTPEALSLWIAAVLPTENRQIKHDLLVSTDTSHRLEVCMSKLQAL 378
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA) HSP 1 Score: 246 bits (629), Expect = 4.190e-71 Identity = 128/301 (42.52%), Postives = 192/301 (63.79%), Query Frame = 1
Query: 244 TTALPLAALECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIP--ASAESFSQWAAAVLPMPVREKHA---MLSGRSTADRLVACERHLASLTTGRGR 1131
+T + L+C++CL +VCEP+++ CGH+FCR CL ++R KKKCP CRAVCH +VMLANIAQ CFP+ R +E +A ++KF T LP+F+YN +FPG L LHLFE RY+ M+ R V+++R+F Y+PN+S+Y AT GDV L+A + ECEFLSDGR LLKA L+ R + + +VEEGTQGLH+C+ +A + + ++ A V+E+HA+ ++ A G +++ G+ P ++A FS W +A++ M R + +L TA+RL + L+ + + R
Sbjct: 22 STRIEQDMLQCSLCLGIVCEPITIPCGHTFCRSCLYLAMQRTKKKCPNCRAVCHVDPSSHSVNVMLANIAQKCFPKEYKKRAEECKALKQKFQTTLPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRQFLYLPNFSDYKATAGDVGLLAYVDECEFLSDGRALLKATLVKRVVITNSWVEEGTQGLHYCQYQAYEETDKTVKE-----ADVKEIHAKVNVILQSAPG-LREQIVNHIGKQPPISNATQFSFWISALVTMITRAGKSGMPLLKTTKTAERLKLVKTVLSQIVSQTSR 316
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6B2LCC5_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCC5_9EUKA) HSP 1 Score: 223 bits (569), Expect = 6.170e-63 Identity = 119/281 (42.35%), Postives = 177/281 (62.99%), Query Frame = 1
Query: 268 LECAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGN----ASARVEELHARTRRLILDAIGPF-MSEMIERYGEIPASAESFSQWAAAVLP----MPVREKHAMLSGRSTADRL 1083
++C +CL+++ EP+S+ CGH+FCR CLV +R +KKCP CRAVC A Q E+V LA+I +TCFP+ A RLKEVE ++ + LP+F++N +FPG L+LHLFE RYKLM+KRV+ +R+F Y+PN++NY A+ GDV ++A+++EC FL DGR LL+A+++ R V D +VE+GT L +C+ E DEP +++Q A+ +E +RL + I F + E + + E ++ E+ S W L M K A+L S RL
Sbjct: 1 MDCTICLNMLVEPISVPCGHTFCRTCLVAAQQRAQKKCPVCRAVCVIDATAQKENVQLASILKTCFPKQYAERLKEVEETKKTWKQNLPIFFFNDTLFPGGVLKLHLFEERYKLMIKRVLEGNRKFVYLPNFTNYKASKGDVGVVAEVLECRFLHDGRALLQARIVERAVVADSWVEDGTGNLAYCQYELFKDEPENDDQLQELLVTANLSLERFKGFVQRL--EPIRQFTLKEQLGGFPEERSTPEAISWWLINTLSRFDGMSTSTKVALLKSNSFKWRL 279
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: A0A6V3MPG8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3MPG8_9EUKA) HSP 1 Score: 223 bits (568), Expect = 2.660e-62 Identity = 123/303 (40.59%), Postives = 186/303 (61.39%), Query Frame = 1
Query: 244 TTALPLAALE-----CAVCLSLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYVPNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRL--ILDAIGPFMSEMIERYGEIPASAES--FSQWAAAVLPMPVR---EKHAMLSGRSTADRLVACERHLASLT 1116
TTA A++E C +CL+LVC+P+++ CGH+FCRVCL ++R+KKKCP CRAVCH +VMLA IAQ CFP+ RL E + E+EKF + P+F+YN +FPG L LHLFE RY+ M+ R V+++R+F Y+PN+++Y A GDV L+A + ECEFL DGR LLKA + R V + +VEEGTQGLH+C+ +E + ++ EEL+A +++ + + + +++ G+ P +S W AA + M R + ++L T++RL +R L+ ++
Sbjct: 20 TTASSSASIEADMLTCPLCLNLVCQPITVPCGHTFCRVCLYMAMQRSKKKCPNCRAVCHVEPASHAVNVMLAQIAQKCFPKQYEQRLLESKQEQEKFESTSPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRKFIYLPNFTDYKAKTGDVGLLAYIDECEFLPDGRALLKATIQKRVKVTNTWVEEGTQGLHYCQFHPYVEEDKTVDE--------EELNAVHKQVNGLFNHVPGLKDQIVHHIGKQPPLTNPVLWSFWLAAFVTMVSRSGVQSMSLLKTTKTSERLKQSKRLLSQVS 314
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Match: D8LI81_ECTSI (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI81_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.260e-53 Identity = 103/227 (45.37%), Postives = 143/227 (63.00%), Query Frame = 1
Query: 436 MLANIAQTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRRFAYV--------PNYSNYVATIGDVALIAQLVECEFLSDGRVLLKAKLISRQTVIDHFVEEGTQGLHFCRVEARGDEPPSNEQNGNASARVEELHARTRRLILDAIGPFMSEMIERYGEIPASAESFSQWAAAVLPMPVREKHAMLSGRSTADRLVAC 1092
MLA IA++ FPEL RL+E EAE+ KF LP F+YNVP+FPG++L +H FEPRYKLMM+R++NTSRRFAYV N G +AL A + E EFLSD RV++K KL R TV++ FVE GT LH+C++E D+P Q+G A +E+LH R + + +GPF +++E +G +P A S W A++LP +KH+++ R T R+ C
Sbjct: 1 MLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYNVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVQSTNNDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGDLHYCQLEPFDDDPL---QDGGADE-LEDLHTRAKTMCNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRTC 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7037.18087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7037.18087.1 >prot_Ecto-sp13_S_contig7037.18087.1 ID=prot_Ecto-sp13_S_contig7037.18087.1|Name=mRNA_Ecto-sp13_S_contig7037.18087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp MDLTGGTASGKGDGGGMSKTPQGGRVDGTTALPLAALECAVCLSLVCEPVback to top mRNA from alignment at Ecto-sp13_S_contig7037:281..7524+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7037.18087.1 ID=mRNA_Ecto-sp13_S_contig7037.18087.1|Name=mRNA_Ecto-sp13_S_contig7037.18087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7244bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7037:281..7524+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7037:281..7524+ >mRNA_Ecto-sp13_S_contig7037.18087.1 ID=mRNA_Ecto-sp13_S_contig7037.18087.1|Name=mRNA_Ecto-sp13_S_contig7037.18087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7037:281..7524+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |