prot_Ecto-sp13_S_contig7036.18086.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7036.18086.1
Unique Nameprot_Ecto-sp13_S_contig7036.18086.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length250
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7036.18086.1 vs. uniprot
Match: A0A6H5L6E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E1_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 8.570e-69
Identity = 230/255 (90.20%), Postives = 231/255 (90.59%), Query Frame = 0 
Query:    1 HPVSTARSAGLALIRDLCEAFPDKAVPALIAEAKSALVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ALSARRWRLREAALLCLGVASKPITRQVKRRCPLAVKLKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SCPNAPERGTRGGEGAXXXXXXXXKCKHKCKNSKASSFSPGTLCRGARGLGLDLGGFQAVIVAAAEGRSHHPQEVSSPFVHARGLWATARFASLLSAE 250
            HPVSTARSAGLALIR+LCEAFPDK VPALIAEAKSALVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ALSARRWRLREAALLCLGVASKPITRQVKRRCPLAVKLKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SC NAPERGTR     XXXXXXXX            SFSPGTLCRGARGLGLDLGGFQAVIVAAAEGRSHHPQEVSSPFVHARGLWATARFASLLSAE
Sbjct:  356 HPVSTARSAGLALIRELCEAFPDKVVPALIAEAKSALVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSARRWRLREAALLCLGVASKPITRQVKRRCPLAVKLKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCWNAPERGTR--XXXXXXXXXXXXXXXXXXXXXXXSFSPGTLCRGARGLGLDLGGFQAVIVAAAEGRSHHPQEVSSPFVHARGLWATARFASLLSAE 608
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BLAST of mRNA_Ecto-sp13_S_contig7036.18086.1 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.770e-49
Identity = 173/252 (68.65%), Postives = 173/252 (68.65%), Query Frame = 0 
Query:    1 HPVSTARSAGLALIRDLCEAFPDKAVPALIAEAKSALVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--LSARRWRLREAALLCLGVASKPITRQVKRRCPLAVKLKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCPNAPERGTRGGEGAXXXXXXXXKCKHKCKNSKASSFSPGTLCRGARGLGLDLGGFQAVIVAAAEGRSHHPQEVSSPFVHARGLWATARFASLLSAE 250
            HPVSTARSAGLALIRDLCEAFPDKAVPALIAEAKSALVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LSARRWRLREAALL  G                                                                TRGGE  XXXXXXXX        SKASSFSPGTLCRGARGLGLDLGGFQAVIVAAAEGRSHHPQEVSSPFVHARGLWATARFASLLSAE
Sbjct:  495 HPVSTARSAGLALIRDLCEAFPDKAVPALIAEAKSALVDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSARRWRLREAALLWGG----------------------------------------------------------------TRGGEXXXXXXXXXXXXXXXXXXSKASSFSPGTLCRGARGLGLDLGGFQAVIVAAAEGRSHHPQEVSSPFVHARGLWATARFASLLSAE 682
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7036.18086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6E1_9PHAE8.570e-6990.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8B3_ECTSI1.770e-4968.65Importin N-terminal domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7036contigEcto-sp13_S_contig7036:2569..5145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7036.18086.1mRNA_Ecto-sp13_S_contig7036.18086.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7036 2569..5146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7036.18086.1 ID=prot_Ecto-sp13_S_contig7036.18086.1|Name=mRNA_Ecto-sp13_S_contig7036.18086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp
HPVSTARSAGLALIRDLCEAFPDKAVPALIAEAKSALVDSSSSSAGAGGG
DGEAGAATSAANNNIPRAADVVPPAVAAAALSARRWRLREAALLCLGVAS
KPITRQVKRRCPLAVKLKKEQQHNNTTNSNGGSGGGGSSSANGSHAASSS
SSSCPNAPERGTRGGEGAGGGAAAGGKCKHKCKNSKASSFSPGTLCRGAR
GLGLDLGGFQAVIVAAAEGRSHHPQEVSSPFVHARGLWATARFASLLSAE
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