mRNA_Ecto-sp13_S_contig7035.18085.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7035.18085.1
Unique NamemRNA_Ecto-sp13_S_contig7035.18085.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE)

HSP 1 Score: 511 bits (1315), Expect = 2.770e-167
Identity = 286/298 (95.97%), Postives = 290/298 (97.32%), Query Frame = 1 
Query:    1 LAFDDAGTDFAACKLDSSGNVTWRWQATTGGLDAVSSIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVEDDVVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGGGXXXXXXXXXXXXXXXXXXXSQGTEVDSVSSCGSGYDGRMVLAGFTIASGFGVGSDTPTVLDAPDLAAVFLDTTRSVPVETELVPSAGSTPVVIAVVAGVLAVAIIGLTILERWLKKHPRRGDGSLSPLG 894
            LAFDDAGTDFAACKLDSSGNVTWRWQATT GLDAVSSIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGT EDD VEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDT EGAA+Q DGSVVLSGNSGGGXXXXXXXXXXXXXXXXXXXSQGTEVDSVSSCGSGY+GRMVLAGFTIASGFGVGSD PTVLDAPDLAAVFLDTTRSVPVETELVPSAGSTPVVIAVVAGVLAVAIIGLT+LERWLK+HPRR D SLSPLG
Sbjct:  166 LAFDDAGTDFAACKLDSSGNVTWRWQATTDGLDAVSSIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTAEDDFVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTLEGAAIQGDGSVVLSGNSGGGXXXXXXXXXXXXXXXXXXXSQGTEVDSVSSCGSGYNGRMVLAGFTIASGFGVGSDAPTVLDAPDLAAVFLDTTRSVPVETELVPSAGSTPVVIAVVAGVLAVAIIGLTVLERWLKRHPRRED-SLSPLG 462
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: D7G371_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G371_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 2.650e-164
Identity = 275/298 (92.28%), Postives = 287/298 (96.31%), Query Frame = 1 
Query:    1 LAFDDAGTDFAACKLDSSGNVTWRWQATTGGLDAVSSIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVEDDVVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGGGXXXXXXXXXXXXXXXXXXXSQGTEVDSVSSCGSGYDGRMVLAGFTIASGFGVGSDTPTVLDAPDLAAVFLDTTRSVPVETELVPSAGSTPVVIAVVAGVLAVAIIGLTILERWLKKHPRRGDGSLSPLG 894
            LAFDD GTDFAACKLDSSGNVTWRWQATT GL+AVSSIAPAN SF+LGGRTTG+FNGTSAGGTDFVAVKLDDSGTEVWRWQDGTV+DDVVEAV HSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDT EGAA+QEDGSVVLSGNSGGGXXXXXXXXXXXXXXXXXXX Q TEVDSVS CGSGY+GRMVLAGFT AS FGVGS++PTVL+APD AAVFLDTTRSVPV+TELVPSAGSTPVVIAVVAGVLAVAIIGLT+LERWLKKHPRRG+GSLSPLG
Sbjct:   40 LAFDDGGTDFAACKLDSSGNVTWRWQATTDGLNAVSSIAPANDSFILGGRTTGNFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVQDDVVEAVAHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTLEGAAIQEDGSVVLSGNSGGGXXXXXXXXXXXXXXXXXXXXQETEVDSVSLCGSGYNGRMVLAGFTFASDFGVGSNSPTVLEAPDFAAVFLDTTRSVPVDTELVPSAGSTPVVIAVVAGVLAVAIIGLTVLERWLKKHPRRGEGSLSPLG 337
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: A0A6H5JZC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC7_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.370e-29
Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 1 
Query:   19 GTDFAACKLDSSGNVTWRWQATTGGLDAVS-SIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVEDDVVEAVVHSDDGSA---VLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGG 504
            G DF A K+   G   W WQ  T   D ++ ++  ++GS VL G T GD+ GT+AG  DF AVKLD+SG  +W+WQ GT +D+++  +  ++  S    VL G T GSW++ NA G    DF A  L +DG E+W WQDGT  DDT +  A+  DGSV L+G + G
Sbjct:   47 GFDFLAVKIGPDGLYLWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGG---YDFCAAKLDADGNELWSWQDGTGADDTTKAVAVDGDGSVFLAGYTEG 209
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 3.630e-27
Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 1 
Query:   19 GTDFAACKLDSSGNVTWRWQATTGGLDAVS-SIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVEDDVVEAVVHSDDGSA---VLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGG 504
            G DF A KL   G  +W WQ  T   D ++ ++  ++GS VL G T GD++GT+AG  D  AVKLD+SG  +W+WQ GT +D+++  +  ++  S    VL G T GSW++ N  G    DF A  L +DG E+W WQDGT  DDT +  A+  DGSV L+G + G
Sbjct:  225 GFDFLAVKLGPDGVYSWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWSGTNAGLGDLAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNVGG---YDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEG 387
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 4.920e-24
Identity = 72/163 (44.17%), Postives = 98/163 (60.12%), Query Frame = 1 
Query:   19 GTDFAACKLDSS-GNVTWRWQATTGGLDAVSSIAPANG--SFVLGGRTTGDFNGTSAG-GTDFVAVKLD-DSGTEVWRWQDGTVEDDVVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSG 492
            G+DF A  + S  G+  W WQ  T   D +  +    G  + VL GRT GD+   +AG GTDF AVKL+   G+E+WR+QDG+  DD +++V  ++D + VLAG+T GS   DNA      D A V L +DG  +WRWQ GT E D    AA+ EDGS+V++G
Sbjct:  127 GSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTEGSLGGDNAG---ETDCAVVKLDADGGVLWRWQGGTAESDVCSAAAVAEDGSIVVAG 286
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.030e-22
Identity = 94/239 (39.33%), Postives = 114/239 (47.70%), Query Frame = 1 
Query:   34 ACKLDSSGNVTWRWQATTGGLDAVSSIAPANGS---------------------FVLGGRTTGDFNGT-SAGGTDFVAVKL-DDSGTEVWRWQDGTVEDDVVEAVVHSDDGSAV-LAGHTYGSWSSDNADGSFSKDFAAVMLSS-DGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGG-------GXXXXXXXXXXXXXXXXXXXSQGT-EVDSVSSCGSGYDGRMVLAGFTIAS 651
            A K    G   WR QA T   D     A A+GS                      VL G T G +NG  SAGG+DFVAV L    G+ +W WQDGT EDDV+  +V    GSAV LAG T G W+  NA      DFAAV L + DG EIWR+QDG++ DDT +  A  ED +VVL+G + G       G                     GT E D  S+     DG +VLAG+T+ S
Sbjct:    2 AVKFAQDGTEQWRLQAGTPETDTFHDAAAASGSPSTVATMAATGTSAAGDESTAIVLAGFTKGGWNGAASAGGSDFVAVSLASGDGSRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANA--GEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVAEDGSIVLAGYTVGS 238
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.170e-21
Identity = 67/165 (40.61%), Postives = 93/165 (56.36%), Query Frame = 1 
Query:   25 DFAACKLDSSGNVTWRWQATTGGLDAVSSI----APANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVEDDVVEAVVHSDDG-SAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGG 504
            DF +  LD  G+  WR+Q   G L ++SS     A ++GS VL G T GD+ GT+AG  DF  VKL + G   W WQDGT+ D+  E V    DG S V AG+T+G+W++  A+     D   + +  DG  +W +Q GTT  D F G  +  DG+ +L+G S G
Sbjct:  225 DFFSVALDEDGSELWRFQ--DGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQG 387
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 4.880e-21
Identity = 67/166 (40.36%), Postives = 91/166 (54.82%), Query Frame = 1 
Query:   22 TDFAACKLDSSGNVTWRWQATTGGLDAVSSI----APANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVEDDVVEAVVHSDDG-SAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGG 504
            TDF    LD  G+  WR+Q   G L + SS     A ++GS VL G T G++ GT+AG  DF  VKL + G   W WQDGT  D+  E V    DG S V AG+T+G+W++  A+     D   + +  DG  +W +Q GTT  D F G  +  DG+ +L+G S G
Sbjct:  170 TDFFTVALDEDGSELWRFQ--DGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGTNAGAQDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAG 333
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.810e-20
Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 1 
Query:   22 TDFAACKLDSSGNVTWRWQATTGGLDAVSSIAPANG--SFVLGGRTTGDFNGTS-AGGTDFVAVKLD-DSGTEVWRWQDGTVEDDVVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRW-----QDGTTEDDTFEGAAMQEDGSVVLSGNSGG 504
            +DFAA +LD +G   WR+Q  T   D +++ A  +G  S V+ G+T  +F+G S +G  D V VKL+  SGTE+WR+QDGT   D +  +  ++D   V+AG T G WS +NA      DFAAV LSS  + I  +     QDGT E+D  +G A+Q DGSV+L GN+ G
Sbjct:  133 SDFAAFRLDGNGEEIWRYQDGTEEEDLMTAAAMGDGDSSVVMAGQTYVNFSGASNSGSADIVVVKLNATSGTEIWRYQDGTSVYDKLGLIAVAEDNGIVVAGSTDGIWSGENAG---LDDFAAVKLSSFSRLIIMYAHVLPQDGTAENDFLDGVAIQADGSVILGGNTVG 299
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BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.070e-18
Identity = 68/156 (43.59%), Postives = 94/156 (60.26%), Query Frame = 1 
Query:   34 ACKLD-SSGNVTWRWQATTGGLDAVS--SIAPANGSFVLGGRTTGDFNGTSAGGTDFVAVKLDDSGTEVWRWQDGTVEDDVVEA--VVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVL 486
            A KLD + G+V W++QA       VS  + + A+GS V+GG T GD++G   G  DF +V L++ G+E+WR+QDG+ E  +  A  V    DGS VLAG T G ++  NA     +DFA V L+ +G   W WQDGT  DD FEGAA   DG+ ++
Sbjct:  173 AVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGS-EFSISSAWGVAALSDGSVVLAGVTDGDYAETNAG---EQDFALVKLTEEGVLDWTWQDGTPYDDGFEGAATGIDGTSMV 324
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7035.18085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJ25_9PHAE2.770e-16795.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G371_ECTSI2.650e-16492.28Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
A0A6H5JZC7_9PHAE2.370e-2943.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7A3_ECTSI3.630e-2743.37Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
D7FXY5_ECTSI4.920e-2444.17von Willebrand factor type D domain protein n=1 Ta... [more]
A0A6H5JF09_9PHAE1.030e-2239.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIH5_ECTSI1.170e-2140.61Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
D7FIH4_ECTSI4.880e-2140.36Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
A0A6H5KY76_9PHAE1.810e-2043.53Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5L7T2_9PHAE1.070e-1843.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7035contigEcto-sp13_S_contig7035:1..6087 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3397
Hectar predicted targeting categoryother localisation
Exons6
Ec32 ortholog descriptionMembrane-localised QAD domain protein
Ec32 orthologEc-03_004750.1
Cds size516
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7035.18085.1prot_Ecto-sp13_S_contig7035.18085.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7035 2139..3587 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463965.053458-UTR-Ecto-sp13_S_contig7035:0..781681463965.053458-UTR-Ecto-sp13_S_contig7035:0..78Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7035 1..78 +
1681463965.0633192-UTR-Ecto-sp13_S_contig7035:594..6731681463965.0633192-UTR-Ecto-sp13_S_contig7035:594..673Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7035 595..673 +
1681463965.0724294-UTR-Ecto-sp13_S_contig7035:1260..13461681463965.0724294-UTR-Ecto-sp13_S_contig7035:1260..1346Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7035 1261..1346 +
1681463965.0814745-UTR-Ecto-sp13_S_contig7035:2000..21381681463965.0814745-UTR-Ecto-sp13_S_contig7035:2000..2138Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7035 2001..2138 +
1681463965.117553-UTR-Ecto-sp13_S_contig7035:3587..60871681463965.117553-UTR-Ecto-sp13_S_contig7035:3587..6087Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7035 3588..6087 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463965.0906405-CDS-Ecto-sp13_S_contig7035:2138..21771681463965.0906405-CDS-Ecto-sp13_S_contig7035:2138..2177Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7035 2139..2177 +
1681463965.0996518-CDS-Ecto-sp13_S_contig7035:2753..28911681463965.0996518-CDS-Ecto-sp13_S_contig7035:2753..2891Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7035 2754..2891 +
1681463965.1085794-CDS-Ecto-sp13_S_contig7035:3248..35871681463965.1085794-CDS-Ecto-sp13_S_contig7035:3248..3587Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7035 3249..3587 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7035.18085.1

>prot_Ecto-sp13_S_contig7035.18085.1 ID=prot_Ecto-sp13_S_contig7035.18085.1|Name=mRNA_Ecto-sp13_S_contig7035.18085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
MLSSDGKEIWRWQDGTTEDDTFEGAAMQEDGSVVLSGNSGGGFVALRLNA
SGTEVWRWEGGSQGTEVDSVSSCGSGYDGRMVLAGFTIASGFGVGSDTPT
VLDAPDLAAVFLDTTRSVPVETELVPSAGSTPVVIAVVAGVLAVAIIGLT
ILERWLKKHPRRGDGSLSPLG*
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mRNA from alignment at Ecto-sp13_S_contig7035:1..6087+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7035.18085.1 ID=mRNA_Ecto-sp13_S_contig7035.18085.1|Name=mRNA_Ecto-sp13_S_contig7035.18085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6087bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7035:1..6087+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCGCGTTCGACGACGCCGGGACCGACTTCGCCGCGTGCAAGCTGGATAG
CTCTGGGAACGTCACGTGGAGGTGGCAGGTGAGTCGCGAGGTCCTCAGCT
TTCCATAGGGGGAGCTGTACTCTTGGTTTTTTGTTTGGTACTCCGAGCGG
CGTTGTTGTAGGCTTCCCCCCCAGTACACACAGCCTTTGGAAGGATTTTG
GTTTGGTTTGTAGTGTAGGGTACAGGGTGAGGTTGGGGGTTAGGGTTCGG
GATATGGGTATCCCCCCTCTCTAAACCATTGATCAACTCTACCATCCTCG
TGAGAAAGGTCCCTTCCTCCACGATAGGCGTTGATCCGCCGCACCGCGTG
GCGGTCGCTGGGGTTATCCCTGAAAGAGACTTGAGGATCGGCGGCACAGA
GAAGCTGCCGCAGTAGCTTCGTGGACGAGCCCAGTGCACGCCACGTATTG
ATTTTGGTCGTTCAGTTGTCAAGGAACTGGGTGTTGTAATGAACGGTATC
TCAACAGTAGTGTTGTACGTCTTGCTCGCACAGCCGACGTGGTTCGATTC
CTTTTTTTTTCTTGCTTCCGCTACCTCCGCCGCTACCCTGCAAGGCCACA
ACGGGCGGGCTCGACGCCGTGTCCTCGATCGCACCGGCCAACGGCAGCTT
TGTCCTTGGCGGCCGAACAACCGGTAAGGCCAACGTGTTGCGTTACAAAG
GCCAACTTATTGCGTCGTAGAAAACGGCTATTATTTAGTCGATTGGATTG
CTCAGTCAGACAAGGCTAACGTATCGCGTGATATACAAAGGCTAATCCAT
TCGACCACTAAGTCAGCGATGACTTTGGTTAACCGCTTCCTAATATTGCG
CAATAGCGCGGTTCATCTTCTCACCTAGCTTTTGTTTCGTTCGGCTTGGC
TTCCACGTAAGTTTCCACGTCCGCTCTGACGCTTTCGGTACTTGGTCTAT
TTGCGGCGACGGCAGCATCTGCCGGCCATTGGTCGAACGACAGCGACACG
CAGTAGGTAACTACCTCCCTCTTCTCCAATCCTCAACGTCCCTGCCTATC
GTCAGGCATGATGACATCGATGCACCTCCCCCCCCTATGTCTTCTTCGAA
ATTCTCAAGCGAAGAAACTCCCACGGATCGCCGGGAATTTCATGAAACCT
GACCATCTTCAGGTCCGCGGTTTTTTCCCGAAAGTTCTTTTTTTCCCAGG
AAATCACACGCACACACATTCAATGAAAGAAGCACACGCGCCCCCCTTTG
TCGCCGCCAGGAGACTTCAACGGCACAAGCGCGGGGGGGACAGACTTCGT
CGCCGTGAAGCTAGACGACTCGGGGACAGAGGTCTGGCGGTGGCAGGTCA
GCGCTCACCCTGGCACAAGCGTGCGGTTTGACTGGCGGGGCGGTATATTC
CTTTGTTGTTGATGAAGGGGCGACCGGTAGGACATAGGGACAACTTTACC
TCAAGAATGCACGCGGTAACACGTGTGCACCATAGAGGTTTCGTGAGGCA
TGTGTGGGTGGCCCTGTGTTTTCGGGTGACGGTCGCTCGGCGTTGTAAAC
AGGGCGCAATTTCGCCGGCCCTGCAGAGGCGGAGAATTTGTCGAGGTGTG
TTGTACGTTGGTCCCCTGATGAACCAAAATGATGATCCGAATGAGACGTT
CATTTCTCTGTGTTAGTTGTTCGCCACCTCGGGTAGTGTGTCGTCCGCAA
GCGGCCGTTCCACGTTGCGCGGACTCTCGTGCGGCATGCGCGCAACGCGA
AGAGAGCCTGTGACGTAACCTGGCCGATTTACGATTTACGGTTCGCCACT
GTGTGACGCGGCGCGGTGTCCTGCCTCGGGAAGAGTTGTGAGAAAAGTGC
GTACAGTGAAAGAAAGATTGTACCCGTTCGAGATATTACCACAGACGAAG
GGTATGTGTTGAAGTCTTCACAGTGAATGGGAAGAAATTCGTTCACGCCG
GCGGAAGGATACTCGTTGACGGACTTCGATGGTCCCTCGTTCCCCTCCAG
GACGGCACCGTCGAGGACGATGTTGTGGAGGCCGTTGTGCATTCTGATGA
CGGGTCGGCCGTTCTCGCCGGCCACACGTACGGGAGCTGGAGCTCTGACA
ACGCGGACGGCAGCTTCAGCAAGGATTTCGCCGCGGTGATGCTTTCTTCT
GATGGGAAGGAGATTTGGCGATGGCAGGTGAGCGCTTGTTTTCCTGGCCC
ACGCCTTCCGTGGCTCCTCGCGGAGGAACTTCTTGAGGTGTACCAACCAC
AACCGGCCGGAGACAGAATCACGGATGTTGCGTCGGCGATGTATACAACC
TCACAAGCACCGACTTCGGTTTTAAGCCTGCGCGCAACAATGCCAACCTT
CTGTTTATCCCCAAGACAAACTTATACTAGGTCCGACTTCAAGGGGGCGA
AGTCCTGGAGAGTCACGGCTAACGGGTATCTGGGGGCAAAGGGTCTTGAG
ATTAGGTTTCACGCAGCCTGGTCGTTATCTCGTTCTTCTGTGACGGCGGC
CCTCTCTCGATCCTCAAACACTCGAGCGTGCAACACCGACGCATGAATCT
CAAGTCCAGCGCACTTGCGTGAACTTTGTTCTGTTGGCCCGTTTTGGGGT
AGTTTGCCTGTGGTTCCGGAAGGAGCCCGCATCAGTCGGTTCAATATCGA
TGTCGGAAGAGACTGAGAGCAGACATTGCGACGGTTGTTTATTTGATGAC
TCAACCACAACAAGAACGAACGTAATCGGCCGTACGAACGAACGTGGCGA
CAGGATGGCACTACTGAAGACGATACATTTGAAGGGGCGGCAATGCAAGA
AGATGGTTCGGTGGTCTTGAGCGGAAATTCCGGCGGCGGGTTCGTGGCGC
TAAGGTTAAACGCAAGTGGCACGGAGGTTTGGCGATGGGAGGTGAGGTTC
GCTCACATAACAAAGGTTTCGTGTTGACGAAATAGTGTTTCTACATGTGT
CCGTGTCTCGCACCATGGGGAGGGGGGGGTGCCTCCGCATGTTTGAGGCA
AGCACCAACCTCTGACACTCCAGCATCGTTACCTATTCGCGCTCTTGGCT
TGGTTTGGCATCGCTTTTCTGCGGCGAGACCATCCCCCAGTTTTTAGAAC
CCCTACTTTCTCCCGTCATCCCTCTATCTCCTCCACACGTGCGGGTGTAA
GTCCTCTAGGTTTGCCCGCCAAAGAGCCGACTCGGTCGTCTTTGTACGGA
CATTCGTGCCAATCGCCTGCGTGTATCTCGCGACGTTGACAACCACAGGG
TGGCTCGCAAGGGACCGAGGTCGACAGCGTGAGCTCGTGCGGCTCCGGGT
ACGATGGCCGGATGGTCCTGGCGGGCTTTACGATTGCCAGCGGCTTTGGG
GTGGGGAGCGACACGCCGACGGTTTTGGACGCGCCTGACCTTGCGGCTGT
CTTCCTCGACACCACCAGGTCTGTGCCGGTGGAAACTGAGCTTGTCCCTA
GCGCTGGGTCCACGCCCGTGGTGATCGCGGTTGTAGCCGGGGTGCTGGCC
GTGGCAATCATCGGTCTCACTATCCTCGAGAGGTGGCTCAAGAAGCATCC
GAGGAGGGGAGACGGTTCCTTGTCCCCACTGGGTTAGGATTGTAAGCGGC
GCTTGGTCTTGTATACCCCGAAGCACGGGATGCCGAACCCAGAGTGGACA
TGAGGCGGCGATTGCTGGCTGGGAAGATGCCCTTGCTTTGCTCCGAGAGA
GCACGTCGGAGAGCCATCGGAATGAGGGTCTTCTGCCCTCGACCAGGTCG
TCGCGGCGTCCGTCTCCGACTGTAGAGGGGACCAGGCGATGTCCTTGTCG
GCGACGCTCTCTGCGTTCGTTTCCGATTGCGGAGAGGGCCAGGTGGTACC
CTTGTCGACGGCGCCTTTATGCCAAACCTCCGGCATGCGATAGGTTGTCG
GCGGCAGGCCCATTGCCATGTCTCCCGTGTCACAGCAGGAATGTGTGAGC
GTGTGTCCTTCGCTACAAGAGCGCGCGCACAGGGTACAGTGGAATTTCCT
GCGGATTTCTCCGTGGTGTTTTGGACTGCCTCGCAGTCCGAATGCTGCGC
ATCGTGTGCATTTGCGCCCATCCCAGCTATTGTACAGCATCTCACGAGCG
TACATTCGTGCCCGGGATAATATTGTTCAAAGTTTGAACATTCCCGAAGT
TTTGTCCCACGTTTTAAATTGCCGAAGCTAGAGGTGCTTCCGATTTTTCC
TCCATCCTTTTCACCACTACAAGTAAGGCACGTTTGAAGTTTAGGTCACG
TACGACGTCGAGTCACGGAGACCGCCAGTGTTCTGCCGTCCATGAAAGAG
CATCGGTACGAGAGCCGTCGGCACATCAGAACTGCGGGCAAAGTGTTTCA
TTTTTTCCTAGCCGCGTGGTCTAGCGTGGCGTTATTGGTGGTCGGTGGCA
GCAGCCATAGGGATGGCTCGTTGGGTTTCTGTGTGCGGCTGGTCAACGCA
AGCAATGGCGTCGTTCTTGCTTGGACCTGATTGTTCTTGAGGCCATCCCC
TTGGGGGTGGGAAGTGCCGGGAATGTTCATGCGACGACGTATCGCCGGCT
TTTTATTTTCTGACAAAGCTGTCTGACGAATCGGAATACGTATCTCATAG
AGTGATTTGTGTCACTTTTGCCGGATGGACAAGCGCCACCGGTAGATGAT
GTATTAGTCAAAATCCCTGGGTGCTCAGCGGGTTTAGGTTGTGTTCTGTT
CTCGCTTGTTCATATCGTTCCGCGTAGGAAACAGCGGGATAGCAGATGAG
GAGTGTCTCGAAAAATCATTCACGACAGAGGGCGTGTACCTTGAAGCACG
GGTGATGTGCTGCTGTACTGAAGCGACGCTGTAGGTTGGATCCGTGTTGC
AAGGTTTTCGGGGGGAAGTCCATGCGCCATCTGCCCGAGCTGCTCGGGCG
CGCGGAAATCGACCTAGTATGCACAGGTGAAGATGTTTTTTTTAACTTCG
TCGACCGCGGCACACAATACCCGGCTTGCCATCGAAACGGTGGCAGGCTT
GCGTGCGAATGTGTGTGTGCCTTTCTTGTCAGCACCGACCGCTCGAACCG
ATTGCCAGTGGGTGTCTGTGTGTCTTGTGTGTCTTGTGTGTCTGTTTCAC
AAGCACCGACCGCGCTTGCCGATCGACCAATGACAACGCGTCAGTCTTGA
AGTGGGACATGTGTTTTGTGTGTGTTGTGTACAGATCGTGTTTGCATACG
AGCTCGCTACTCGTATCAGCACTCCATCATACGTGGGGTTTGCGCGCGAT
CGGAGTGCGATCGGGGTTGCACTCGAATAGACATGAAAGCCGAGATCCGA
CGCTCTTTGGAGGTATCGGACCTAGATGGGGGAATTCGGAAGATGGCAAC
ATTTTGTGCGCAAACGCCGCGAACATTGTGGGGCCACAGGGAACGAGGCT
GCATTGCTAGGACGTACACAAGAGTGCAGTATTCTGATAAAACAGTTTGC
GAATATTGAGGATACGAGGTAGTGCGACGTTGGTGGGGCAGGAAAGTCGT
GTCGAGGTATTTCCGGGAGTACTTTCGGCAATAGAGATGCAAGTAATTTG
GCAGCATGCTCCGTCTAGTTGCGCGGGCGCACCCGCTCAGTAGGCGAGGA
CTCCCTTTCTAGAGAATTTCGCACTGTTGCGCGAGAACTAAAACGTGTTG
AGCCCAGAGCAGCCAGCTTCGTCTGTCGTTTCGCCGTTTATCGAAAGTTG
AAACATGGAGGAAGATCCCTAGCATACGCAGACGGGGTTTCACCCGTGTA
GGAGCGCAGCAGGCTATCGGCAAGCCATTCGATTTGCTGCACGACTCGAA
GGCCTTTATTCGCAATTGGCGACTTAGCTACGCGTCGCTGTTGAAGGGAG
TCGTAGTGTGCGGGGTCGCGCGCGGTTTTGCCATCGACCAAAATATTTGC
CTGTCGCCCTCTGTTGTTTGTGTTTTCCCTTTCATCACTAGGATGGTGTC
AGATGCGTTGGACGGGGCGGTTAGCGAGCCCACGTTGTTGTAAGCGCAGC
TGAGGTCCAGAAAAAAATTAAGTCGTGATGTCACCGATGGACCATTCAAT
CCCTGTCGCGAGTTTGCGCCCGACCCTCCATTTTCAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7035:1..6087+

>mRNA_Ecto-sp13_S_contig7035.18085.1 ID=mRNA_Ecto-sp13_S_contig7035.18085.1|Name=mRNA_Ecto-sp13_S_contig7035.18085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=516bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7035:1..6087+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTTCTTCTGATGGGAAGGAGATTTGGCGATGGCAGGATGGCACTAC
TGAAGACGATACATTTGAAGGGGCGGCAATGCAAGAAGATGGTTCGGTGG
TCTTGAGCGGAAATTCCGGCGGCGGGTTCGTGGCGCTAAGGTTAAACGCA
AGTGGCACGGAGGTTTGGCGATGGGAGGGTGGCTCGCAAGGGACCGAGGT
CGACAGCGTGAGCTCGTGCGGCTCCGGGTACGATGGCCGGATGGTCCTGG
CGGGCTTTACGATTGCCAGCGGCTTTGGGGTGGGGAGCGACACGCCGACG
GTTTTGGACGCGCCTGACCTTGCGGCTGTCTTCCTCGACACCACCAGGTC
TGTGCCGGTGGAAACTGAGCTTGTCCCTAGCGCTGGGTCCACGCCCGTGG
TGATCGCGGTTGTAGCCGGGGTGCTGGCCGTGGCAATCATCGGTCTCACT
ATCCTCGAGAGGTGGCTCAAGAAGCATCCGAGGAGGGGAGACGGTTCCTT
GTCCCCACTGGGTTAG
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