mRNA_Ecto-sp13_S_contig7034.18084.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7034.18084.1
Unique NamemRNA_Ecto-sp13_S_contig7034.18084.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: D8LLX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX5_ECTSI)

HSP 1 Score: 704 bits (1817), Expect = 9.060e-249
Identity = 358/378 (94.71%), Postives = 359/378 (94.97%), Query Frame = 1
Query:    1 SKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDEGFGSARAKLWQNWDLMLFWLEVLQASAYGSAGVESVVPGDVAATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGVWEERGNTDGVILWQLGGLK 1134
            SKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEA+ELLAEHE         DLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYG AAMSLLRQVL SGLYSTKYIGGF ISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLA WSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGD GFGSARAKLWQNWDLMLFWLEVLQA  YGSAGVESVVPGDV ATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHG WEERGNTDG ILWQLGGLK
Sbjct:  438 SKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEADELLAEHE---------DLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGHAAMSLLRQVLASGLYSTKYIGGFHISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAGWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQA--YGSAGVESVVPGDVTATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGAWEERGNTDGFILWQLGGLK 804          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A835ZFA7_9STRA (DUF4953 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA7_9STRA)

HSP 1 Score: 224 bits (572), Expect = 3.390e-66
Identity = 140/372 (37.63%), Postives = 206/372 (55.38%), Query Frame = 1
Query:   28 HYFTPRVGEYDMWAIKYGYMAV-EGEA---EELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAA------FLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDEGFGSARAKLWQNWDLMLFWLEVLQASAYG--SAGVESVVPGDVAATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGVWEERGNTDGV 1107
            +YFTP +G YDMWAI+YGYM V + +A     +  +H          DL+        FSTDED S   G++P  SVFDL  +P+ ++ D+L++V E+ P LLDR+ Q GE  F RY  +   LL+ + +SGLY+ KYIGG  +SKQRR+ ++T  P   V A +QR AL L+++++TG E  G AA      FLP       +    G C G+ +YC    P DVL+++  +R+ +LL   S+D +  +RL+SW  G  G    ++ E+F + T+A+WG     S RA   +NW +MLFW ++L A A    S+G      GD+AA A G  Y +  +   L  +  A+GL +    +   WE RG  + V
Sbjct:   67 NYFTPVLGSYDMWAIEYGYMDVSQADAVAPATMFDQHP---------DLET-------FSTDEDRSRNDGIDPFVSVFDLSSDPLAFFADRLDVVAEIRPKLLDRAVQLGEP-FTRYSDSEKMLLQLIKVSGLYAAKYIGGMQLSKQRRIATNTQAPATPVSAAQQREALALLVKILTGVEAVGSAANSTSVDFLPEPTALPLMVQTGGVCEGIERYCLATEPYDVLTDLQTVREMILLNVLSLDRLDMVRLNSW--GKQGSSAFTIRELFTTLTDAIWGGGLIASTRAASPENWAIMLFWGDLLMAIAVAIPSSG------GDIAAAAAGEAYRIAASAPALDPSAPAWGLSKEFQRRLSTWE-RGAWENV 412          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A7S1TU96_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU96_9STRA)

HSP 1 Score: 114 bits (286), Expect = 9.380e-25
Identity = 87/252 (34.52%), Postives = 123/252 (48.81%), Query Frame = 1
Query:   34 FTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQ-RYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAG-LGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGV 783
            FTPR+GEYD WAI+YGY  VE E+ +L      S L +    L A+A +ALAF TDED SG  G     SVFDL   P  Y+ D+L L   L     +RS   GE   +   GF A      +L +  Y TK IGG+ + K  +  S    P+  VPA  Q  +L  +L V+ G++    A++ P +     + A    C   +  YCYGV PV   +  +   +++L        + R R  +W+ G G +
Sbjct:   97 FTPRIGEYDKWAIRYGYAPVEDESGDL------SGLVSQHPKLTAIADKALAFGTDEDISGAEGAEYHTSVFDLSANPTAYYLDQLALAERLKTSAKERSVFDGEPGTRIDLGFRAAE--STLLFACKYLTKAIGGYLLDKSAK--SSDYAPVSAVPASVQETSLEAILSVLKGEKYYSTASY-PLDLKAYAIKANVDECPNPVEGYCYGVEPVSAFARRDTRDQTILDYLLDPARLERRRDQAWSDGVGSL 337          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A2E5FHL5_9BACT (Uncharacterized protein n=2 Tax=bacterium TaxID=1869227 RepID=A0A2E5FHL5_9BACT)

HSP 1 Score: 107 bits (266), Expect = 1.800e-21
Identity = 80/274 (29.20%), Postives = 131/274 (47.81%), Query Frame = 1
Query:   28 HYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALA----FSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGV-VPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVW 834
            HY +P  G+YD WA++YGY  +  E   +  +HE          LK LAS        F+TD+D +   G +P  + +DL  +P+ ++ED+++L   L   + DR   +GE      G     +L  +   G ++ KY+GG D+S+  + +   P PI  +    Q RAL L++  +T D      A L    DF      S    GLG   +   +  D+ S V + +   L+  F    ++R+R  +W   A G D+LS+S++F +   A+W
Sbjct:  540 HYSSPVTGDYDDWAVQYGYKYLPDEISGV--QHEW---------LKELASDNTHPHHHFATDQDSATAFGWDPYTNYWDLS-DPLSFFEDRIKLAKSLISEIEDRVVSEGEEWTDLRG-GVSQILYDMSRGGPFAAKYLGGHDMSRAHKGDPGAPAPISFISYSEQERALDLLIESLTVDT-----AMLV---DFYPYMVNSFRAYGLGGRSFMQDLNTDIHSTVASRKMMTLMYLFDSSRLVRMRDAAWYHEANGGDSLSISDVFAAVHEALW 792          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A3E0NX28_9BACT (DUF5117 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NX28_9BACT)

HSP 1 Score: 101 bits (251), Expect = 1.570e-19
Identity = 61/177 (34.46%), Postives = 97/177 (54.80%), Query Frame = 1
Query:   31 YFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEP 561
            YF+  +G YDMWAI+YGY  + G+ E    E E     A  C         LA++TDED  G    +PL++ +D+G +P+ Y + + +L+ ELWP LL+ ST+ GE  +Q+   A   LL     +  + ++Y+GG  + +  + ++D P P  +V   +QR AL L+   V  D+P
Sbjct:  563 YFSSTIGPYDMWAIEYGYKPLSGDTE---GEVEELRKIAARCG-----DPQLAYATDEDTRGIDP-DPLSNRYDMGSDPIAYAKMRAKLIGELWPTLLEESTEDGEG-YQKARQAFGVLLGNHGRAMYFVSRYVGGMYVHRAHKGDADAPPPFVVVEPAKQREALALLEEQVFSDKP 729          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A7R9YFV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFV1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.120e-17
Identity = 70/212 (33.02%), Postives = 97/212 (45.75%), Query Frame = 1
Query:   34 FTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDT---PGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQ-YCYG 657
            FTP +GEYDMWAIK+GY       E   AEH                     F+TDED    +GM+   SVFDL  +P+ Y+ED+L+    L      R    GE    R       + R +L S  Y  K IGG+ I K R+ +  T   P P++      Q RAL+ +L V+ G E +   A+   + D + +A     C  + + YCYG
Sbjct:  671 FTPVIGEYDMWAIKFGYENDSQYQEVFEAEHP--------------------FATDEDEPRSAGMDIETSVFDLSSDPIAYYEDQLKFARLLKADAAQRGVLAGEYH-TRIEALLKKVQRTMLSSCAYMAKAIGGYVIGKTRKAQDQTNGAPTPVRRTEQSTQDRALSNILDVLLGAEDSDQTAYSGSDTDVA-VAVEPNDCPNVVEGYCYG 860          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A3N9MTD7_9BACT (DUF5117 domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A3N9MTD7_9BACT)

HSP 1 Score: 90.5 bits (223), Expect = 5.850e-16
Identity = 52/177 (29.38%), Postives = 97/177 (54.80%), Query Frame = 1
Query:   10 QGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYS--GMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLV 534
            +G    +YF   +G YD WAI+Y Y  ++ +A+  ++E +     A     + +A   L + TDED  G S  G++P  S++DLG +P+ Y++D+L++  ELW  + ++   +GE ++Q++       + +  ++     ++IGG    +    + D   P ++VPADRQR AL ++
Sbjct:  542 KGQKQGNYFQTTLGPYDYWAIEYAYKPLDPDAK--ISEKQMLEKIA-----QRVADPMLQYGTDEDAYGLSTRGIDPSCSLYDLGNDPLSYYQDRLDISQELWENIPEKFEIEGE-RYQKFRLVFSQGITEYAIAAANIPRFIGGIHFYRDHIGDPDGRPPFRIVPADRQREALKML 710          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A812QXC6_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QXC6_SYMPI)

HSP 1 Score: 89.4 bits (220), Expect = 1.430e-15
Identity = 78/303 (25.74%), Postives = 135/303 (44.55%), Query Frame = 1
Query:   13 GSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMS-GLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGDEGFGSARAKLWQNWDLMLFWLEVLQA 918
            G A+ H ++P VGEYD  AI+YGY  ++    +         L   L D++  A Q   F T  D   Y G +P    +DL  +P+ YWE +L+L  ++   LL+ S    E+ +  YG A  S++   L   G+ +  Y+GG + +   +    T    Q +PA+ QRRAL ++LR++           LP + +   L   S       Q    +  +D+   V  LR+ +L +    + ++++         G  D  +VSE+    +  V+G    G  +       DL   ++++L +
Sbjct:  514 GEALRHIWSPTVGEYDKLAIRYGYTHLQTSESD-------PGLLQILEDVRRRAEQ---FQTCYDDDLYLGEDPSCLDYDLSADPLGYWEQQLDLYADVQRHLLEMSVAPRES-YDNYGRAVHSVVGGFLPDIGINAVYYLGGINNTYLHKYADQTRRSRQPMPAETQRRALAIILRILRPKTEG----LLPPDSNLPYLVDGS-------QLQGAIESLDLTDLVRRLRQLLLEEVLRSERLLQVHKQENLLAPGDADAFTVSELL---STLVYGVMSAGLDKITSEDEQDLQRIFVQILSS 791          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A812U6K0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812U6K0_9DINO)

HSP 1 Score: 89.4 bits (220), Expect = 1.470e-15
Identity = 73/274 (26.64%), Postives = 122/274 (44.53%), Query Frame = 1
Query:   13 GSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMS-GLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAV 831
            G A+ H ++P +GEYD   I+YGY  ++  A +         L   L D++ LA       T  D   Y G +P    +DL  +P+ YWE +L+L  ++   LL+ S    E+ +  YG A  S+L   L   G+ +  Y+GG + +   +    +    Q +PAD QRRAL ++LR++  +        LP   ++  L   +       Q    +  VD+   V  LR+ +L +A   + ++++       G    D   VSE   +    V
Sbjct:  580 GEALTHVWSPTIGEYDKLVIRYGYTHMQSPAND-------PGLEKVLEDVRRLAE---GMQTCYDDDLYLGEDPSCLDYDLSADPLAYWEQQLDLYADVQRNLLEMSVAPRES-YNLYGRAVHSILAGFLPEMGINAVYYLGGINNTYLHKYPDQSRRARQPMPADTQRRALAIILRILRPNSQG----LLPPASNWPYLVNGN-------QLDGAIESVDLTDLVRRLRRLLLEEALRFERLLQVHKQENLLGPTEADAFPVSEFLSTLVYGV 831          
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Match: A0A7C5YPJ6_9BACT (DUF5117 domain-containing protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5YPJ6_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 2.770e-15
Identity = 77/280 (27.50%), Postives = 134/280 (47.86%), Query Frame = 1
Query:   28 HYFTPRVGEYDMWAIKYGY-----MAVEGEAEELLAEHEASNLSAGLCDLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEA--QFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAAWSGSCAGLGQYCYGVVPVD--VLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGAGGVDTLSVSEMFESATNAVWGD 840
            +Y+ P +G YD WAI+YGY     +    +    L E    N               LA+ TDE    +   +P  + FDLG+EP++YWE  ++   EL  VL  R    GE+   F RY FA ++   +   + +  ++YIGG  I +    + +   P + V A++QRRAL L++  +  ++     AF   +  +  LA    +  G G    G VP D  V   ++++++S L +  S D + R+  + + +     +T +++E+FE+   A+W +
Sbjct:  802 YYWNPTIGPYDYWAIEYGYRIFPNVRTPEDERPYLLEIARRNTE-----------PELAYETDEYADRF---DPYVTRFDLGKEPLEYWELVMQDTHELLRVLPSRVPAAGESYYDFTRYFFATLASFSR---AAVQLSRYIGGLHIRRNFASDPNALPPSEPVSAEKQRRALRLIVDYIFAEK-----AFDLPKGLYLRLAP---NPYGFG----GAVPPDAPVRDFLSSIQRSTLARLMSPDTLRRVANNEFKA-VDPRNTFTMAELFETLQQAIWAE 1051          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7034.18084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX5_ECTSI9.060e-24994.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFA7_9STRA3.390e-6637.63DUF4953 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1TU96_9STRA9.380e-2534.52Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2E5FHL5_9BACT1.800e-2129.20Uncharacterized protein n=2 Tax=bacterium TaxID=18... [more]
A0A3E0NX28_9BACT1.570e-1934.46DUF5117 domain-containing protein n=1 Tax=Planctom... [more]
A0A7R9YFV1_9STRA4.120e-1733.02Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A3N9MTD7_9BACT5.850e-1629.38DUF5117 domain-containing protein n=2 Tax=Bacteria... [more]
A0A812QXC6_SYMPI1.430e-1525.74Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A812U6K0_9DINO1.470e-1526.64Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A7C5YPJ6_9BACT2.770e-1527.50DUF5117 domain-containing protein n=1 Tax=Armatimo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7034contigEcto-sp13_S_contig7034:1733..7621 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score704.5
Seed ortholog evalue2.6e-200
Seed eggNOG ortholog2880.D8LLX5
Model size1137
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Met-zincin
EggNOG OGs2CXMF@1,2RYE2@2759
Cds size1131
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7034.18084.1prot_Ecto-sp13_S_contig7034.18084.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7034 1733..7615 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463964.9550219-CDS-Ecto-sp13_S_contig7034:1732..19481681463964.9550219-CDS-Ecto-sp13_S_contig7034:1732..1948Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7034 1733..1948 -
1681463964.965687-CDS-Ecto-sp13_S_contig7034:2384..26211681463964.965687-CDS-Ecto-sp13_S_contig7034:2384..2621Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7034 2385..2621 -
1681463964.9809098-CDS-Ecto-sp13_S_contig7034:4584..48721681463964.9809098-CDS-Ecto-sp13_S_contig7034:4584..4872Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7034 4585..4872 -
1681463964.9901447-CDS-Ecto-sp13_S_contig7034:5835..59431681463964.9901447-CDS-Ecto-sp13_S_contig7034:5835..5943Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7034 5836..5943 -
1681463964.9994493-CDS-Ecto-sp13_S_contig7034:6613..67451681463964.9994493-CDS-Ecto-sp13_S_contig7034:6613..6745Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7034 6614..6745 -
1681463965.0184505-CDS-Ecto-sp13_S_contig7034:7465..76151681463965.0184505-CDS-Ecto-sp13_S_contig7034:7465..7615Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7034 7466..7615 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463965.0279517-UTR-Ecto-sp13_S_contig7034:7615..76211681463965.0279517-UTR-Ecto-sp13_S_contig7034:7615..7621Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7034 7616..7621 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7034.18084.1

>prot_Ecto-sp13_S_contig7034.18084.1 ID=prot_Ecto-sp13_S_contig7034.18084.1|Name=mRNA_Ecto-sp13_S_contig7034.18084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=377bp
MQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEAEELLAEHEASNLSAGLC
DLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTE
LWPVLLDRSTQQGEAQFQRYGFAAMSLLRQVLMSGLYSTKYIGGFDISKQ
RRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSN
LAAWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLH
SWASGAGGVDTLSVSEMFESATNAVWGDEGFGSARAKLWQNWDLMLFWLE
VLQASAYGSAGVESVVPGDVAATAVGLVYSLMDTGKNLTSADAAYGLHRA
AALKHGVWEERGNTDGVILWQLGGLK*
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mRNA from alignment at Ecto-sp13_S_contig7034:1733..7621-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7034.18084.1 ID=mRNA_Ecto-sp13_S_contig7034.18084.1|Name=mRNA_Ecto-sp13_S_contig7034.18084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5889bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7034:1733..7621- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCAAGATGCAGGGCTCTGCGGTGCCACATTACTTCACTCCACGTGTCGG CGAGTATGACATGTGGGCAATCAAGTACGGGTACATGGCGGTGGAAGGGG AGGCAGAGGAGCTACTAGCAGAGCACGAGGCGAGTAACCTGAGTGCGGGA TTGTGTGTGTTCTGCGGTAGGGCTTATATGTGCAGGAAGGGAAAATGTCG CACGGGTTCGAATCCCTGCTGGATCACTTTTGAAGCACCCTAACTACTTT GTCAGCAGCTCGTGGCGAGGGGTCCGGCCCCGGAGATCCCTGTCACCCGA TGATCCAGCTGGGAGACTAAGAGCCTACGAGTATATATTTTGCTAGATAA AGACTTATCCACTATGCTACTCAGTCAGCGCTGACTGAGTAGCATAGTGG ATAAGTCTTTATTTAACAAGTATGTGTGAAGATACGTAGACATCAAGGTA CTTCTACGCTTTGTTTTGACGAATTTTGCGGTAATTGCGTTCGCCCCCCC CACCACACGCGCTCCCTGACTTAAGACCTTTTTTAGGCTTGTAGTATCAA GCTATCAAGGCCATCTCGATGCTTGTGTGTATATCCTCGCCCCCTCGCCC TCGCCCCCTCTCCCGGTGGCTCATATCGTACCTTTAGGAGTTTCAGCTGT TTTGGTCTCGAATTAGCGGTTGCTTTACTCCAAGCTCATGCATTTACAAT TTTACGTTGAATGTCTGTAAATGATGCTATAGTTCTTCATTACGTTTAGC AAATAGTTTGTGTTGTACCCTAAGTATAGATTATATCCCGAACTGCTATT CTATCTATCGACTATTTGCTATGATCGTAACGTTTTTTTGGGCGTGTACC ATACTTTGTGTACAATCTGCCCCCAGGACCTGAAAGCTTTGGCGTCCCAG GCTTTGGCCTTCTCTACAGACGAGGATGGGTCCGGCTACTCGGGGATGAA CCCGCTGGCGTCAGTGTTCGATCTCGGACAAGAGCCTATGGATTACTGGG AGGACAAGGTACCCCCCTCCCCGTTAGCAAAGCAGGAAGGAACGATTGGC CATCGGTCCTGTGGGAGTGTTGCTCCGCCCTCTCGAGGACGCGTGGTCAA TGGCCCAACAACAAAGCCCCCTCCCCCCTCTCTCTGGATCCGGGGGTCTA CTGTACGGCCTCAAAGCCGTTGGGTATGGATGATACTGCATACCCGTCGA CCCCAACTCCGACGTGCGAATTCACGCCATCAATGGTTTTGGAATTTTGT TGCAATTTTCGGGCGAAGGATGCGTTCGCTCTCTGCTGTGTCTCCGAAAC GCATTACACTCAGAGGTTCATGATACAGCGACTCGAACGCACACCCCCCC CTCAATCGATGGTTTGTGTCAAGATTCATTTAGTGTTCGTTTCTGAGCTT TCGAAAGCTCGCGCTAGTTGTGAAATTGATGTGCCGCATCCACCTCGTGT GATGCAGACATGAGCGTCGAGCCCCGTCTATCCCCTACGGGCCAGCAGGG GGGGGGTTCCCAACGTGGACTTATGTACCGTACTCATCAAACGTCAAGAT CGGCACCATGTCCCATCGTCTTCAAGGCTGAAAAAATGGGGGTGGAACCT ACTGCAGACCCTGCTCTTCTTCACTCGTTCCTCTTGCTGCTTGTCTTTTT GTTGTCCTTCTCTTTTTTTTTTTTTCAGCTGGAGCTCGTTACGGAGTTGT GGCCCGTCCTGTTGGACCGCAGCACGCAGCAGGGGGAAGCGCAGTTCCAG CGGTACGGGTTCGCTGCCATGTCCCTGCTCCGACAGGTATAATCATCATG CGTGGCCCCCACCGGAGCAACCCGCCTTTTTTCATTTCAGACTCGTTGTA AAAGTTTATGAAACCTTCTTGCAGCAGTAGCTGCACTCAAGCCTCACGGA TGGTGGAATTCGCGAGAGGATGCTGGGGTCGGGTGGTGATTGAATGGCGA AGCTCACGCTTGAATGGCGCGCTCTTCTTTATTCGGTTTGGTTCTGTCGT TTTCTGTGCTTTCCTCTCAGGTGACGATGCCACGCACACTGCTGTGCCTC CAAGTCCCCATGATGGACAAGTCATTTTTTGTTGTTGTTGTGTGTCTCTA TAATAGTGAGCGAATCAAGCGGAAACCAGCCTACCGTAGACCACACGCCT TGCAAAGCTCGGTTACATTTCCGCCCGAAGAGGATGTTGCTGTTGTTGTT GTTGTTGTCTTCACATTAAAAGCCGTTCCGATTTCTCTCTACCCTGTACC TTCATCTGTTCGTACTGATCCAACACTTGACGCGGTCGATTCCCGTGGTC ACAGGCTAATGCATGAGGATACCATGATTCGTTTTCGGAAACCTTTTGGC GAGGTTGTTCCAACGCCACCATGTCAGCACCGTTAACAACTGGTAGTGCT GCAGAGTAATCGGGTTTTGAAGCTCGGTCCAGGAGGCTTGGTATCCTACG CAACCTACGGTAGTTGTTGAGGCCGCGGAGAGGACTGACTTGACGCCGAG GGAACGCGTCCATACACCGCCAGCTCCAGGCCAAAGAAAACCACGTGTGA TAAATGCTGTTGCCGATGATGCGGCGGCCAATTGTGACCTTAAAAGCGAG CGCTCATATTTGGTATGTTGTTGCCAATGATACGGCTGCCAATTGTGACC TCAAAGCGAGAGAGCGCGCACGCGTATGTATGCTGCTGCCGATGATGCCG CCAACTGTGACCTTCAAGAGCACGCCCACTTCCGTCGTCGCCGACCCAGG TGCTCATGAGCGGGCTGTACTCCACCAAGTACATCGGAGGGTTCGACATC TCCAAGCAGAGGCGGGTGGAGAGTGACACCCCGGGGCCGATACAGCTCGT GCCCGCCGACCGGCAGAGGAGGGCGCTGACGCTGGTGCTGAGGGTGGTGA CGGGAGACGAGCCGGCGGGGGGCGCCGCCTTCCTTCCCGGAGAGGAGGAC TTCTCCAACCTGGCGGCCTGGTCAGGGTCCTGCGCGGGGCTGGGGCAGTA CTGCTACGGCGTCGTGCCGGTGGACGTCTTGAGCGAGGTATGTGCAGAAC GCGCGCCGACACCGCTTGATAAGTGGTAGCAGTGAAGAGCTTGAGCCTCA AAGAGGTTCACAAGTTTAACAACTTGGCCGTAACAACAGGTGTTCTGTCG AGGCGTCTATCCCACACATAAATCTCTTTAGCCTAGTCACCGCGGAGGTA GTCTACCCCGTGGAGCAAAATAAGAAACGAGCCTCGGCCGAAATAAGAGG ATTGTAAGTAGTGCTGCGTCCTGTATCGTGTATAAGCCAGCTGAAAAAGG GGTTCCGTGTGTAAAAGGTGAAGGGGGGGGGGGGGCGTACCCTGCTGAGC ACTGAAAGTTGTTGCGTTGTGCTGTCACACGTGTTCGCGCCGATAGGAAA TTGAAAACAAAGTACAGACAAAAAATCACGCCGCCGGTTTCAGCGGGGTC AAATTTGTTTCATCCCTTCCCCAGATTGGACATGACTGAGCCCAGTTCTT TCACCACCTCGTTCTCCTCACACAGTCCTTGTCATTCCACCAAAGTAGGT GGGCACCTCAAGCAAGTAATACCCTCCATCGGAAAGCTGTTGTTACCCTT TGATTTTGCTTTGGGCCGGAGAAATGCCTCACGATCACATCTGGATTGAA GCTGTCATCTGCTGCTGGAGGCAACGTTTTCAGCTCTCGGGAAGCAACTT TCATCCAAGTTGGTTACCCGCTTCGGAGCCCCAATTCGGCCAAAACTCCG CGCCATAGTAGAGATAAAAGGCCATAGAACGAATGCATGATGTGCACGAT TTGGGATCTGCACTGCAGCGATCGCAATGGGCTTGCAAAAGTCGGCCCAC ATTCAACTCTTAACTCCAGGAGTCAGCAGACAGGCCTCCGGAACGATCAT GAGCCTACCTCCAAAAACATCATGGTAATCCAAGCCGTGGAAGCACGCAA CGTACCCAGATGCCTTTGGTTACCCACCTGGGGTGAACTAAACCTGACGA AAATTGGTGTGTGTATGCCTTTACATATGGGCAACGCGTAGAGGATGTGC ACGATTTGGGATCAGCACCACAGCGAGAGTTGTAGCAGAAAAACTAAAAG TCCCTCGCGGAGAGACTGCTTCCGGATGTGATTCCAGGATTTGTAATGTC TTCATAAAAAAAAATGTATAACAATTTTTCCATAGGCGCGAATACGTGTG CTGTTGGTTGGCCGGTGACCAAAGCACCTTCTCTTCTTTTCGAAGCCGCG TAAAGTTCAACTGCTTTCACCTGAGAAGGTCACACACATACTCCCGGAAC CTTTCGCGGGTGTTTCGCAGTTTTTTTGCGGGTGGGGAAGGGGGGGGCGG GGCGTATTCATGTTTCTCACGCGTTAGCGGTTAGACCATTGACCGCACAT CCTCGAGTTCATGGTGGGCAGCGGGGGGCAGCGGGGGGCAGCGGGGGGGG ATTTGGGGCTGGTCCGTTGGTCTGCCGTGTAGATTGCACCGAGTGCGGAA CGAGTTGTTATGGCGGTACGGTACGTTTTTTCCGGTCCTACCAACTTTTC GAGATGAAGGATTGTTGCTGTTGTCGCGGGAGAAAATCCACATGACTGGA AGAGGCGGTCTGGTGGTGAACTTGTCGCTACTTGCCTTTTGGGCGTGGAA AGGCTGGTCCCGAGAAACGTTCTTCGCCCGTTGTTCTGTGTGCCTTGTGA TGATAAGGTTCATGCGCGTGCACCGTAGCGCAAACAAGTTAGTCGGCAAG TTTCGTGTCAAGCGCCGTCTCGAAGAGCGGTGTCCACCGTGAGAGGGGCG TTGGATGCGGGCCTGGATGGACACGCATCGATGTCATTCGTTCCACCACA GTCCGTCCTGTTTTGCTCCAAACGTATTGGTCGTTAAAGACTCGCCCCCC GCGCCGCACACACGCATCCGTAAGCGCCCTCCCGCCCACCTAACCAACCA CCGCCCACAATTCACCCCGCGCGTCAAACCCTGAAACCTCGCGGTCCAAG GTGAACGCCTTGAGAAAATCGGTGCTTCTCCAGGCCTTCTCCGTCGACCA CATCATGCGGCTGCGCTTGCACTCCTGGGCTAGCGGGGCAGGCGGCGTGG ACACGCTCTCCGTGTCGGAGATGTTCGAGAGCGCGACAAACGCCGTGTGG GGCGACGAGGGCTTCGGCAGCGCCCGCGCGAAACTGTGGCAGAACTGGGA CCTGATGCTCTTCTGGCTGGAGGTGTTGCAGGCGAGTGTTTTTTGGTACC CGCGTACCGGGTACAGCAGCAACCCGTACCGTATACGGAGGCGTTGTAGG CAAGAGTTTCGTACCCGTACCGGGTACAGCAGCAACCCGTACCGTATACG GAGGCGTTGTAGGCAAGAGTTTCGTACCCGTACAGGGTACAGCGGCAACA CGTACCGTACAAACCGTACTGCCCAACATGGAACGAACGCCGATCGTCTG CGAAGAAGGCGGAGGAGGAGGGGTATTTCGTGGGCCGGCCTGGTATCGGC TTAATTTCTTGTACCAATTGGTGTGTGTGGAACTGTGTCCCTAATTTGTA TCAAGTTTGTGCGTTTGTTGATGTCGGCAAACAAACGCTTTTTTTTTAGC GTCCGCATACGATGTCACCCGCACCCACAAACTCCACGAACACCCCTGGG CGTGCTCCCCCCCCCCCCACCAGGCGTACGGATCGGCCGGTGTAGAGTCT GTCGTCCCGGGAGACGTTGCGGCCACCGCTGTGGGCCTTGTCTACTCTCT CATGGACACCGGCAAGAACTTGACGTCCGCCGATGCGGCCTACGGCCTCC ACCGCGCCGCCGCCCTCAAGCACGGGGTGTGGGAGGAGAGGGGCAACACG GATGGGGTTATTCTGTGGCAGCTGGGGGGATTGAAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7034:1733..7621-

>mRNA_Ecto-sp13_S_contig7034.18084.1 ID=mRNA_Ecto-sp13_S_contig7034.18084.1|Name=mRNA_Ecto-sp13_S_contig7034.18084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1131bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7034:1733..7621- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGGGCTCTGCGGTGCCACATTACTTCACTCCACGTGTCGGCGAGTA
TGACATGTGGGCAATCAAGTACGGGTACATGGCGGTGGAAGGGGAGGCAG
AGGAGCTACTAGCAGAGCACGAGGCGAGTAACCTGAGTGCGGGATTGTGT
GACCTGAAAGCTTTGGCGTCCCAGGCTTTGGCCTTCTCTACAGACGAGGA
TGGGTCCGGCTACTCGGGGATGAACCCGCTGGCGTCAGTGTTCGATCTCG
GACAAGAGCCTATGGATTACTGGGAGGACAAGCTGGAGCTCGTTACGGAG
TTGTGGCCCGTCCTGTTGGACCGCAGCACGCAGCAGGGGGAAGCGCAGTT
CCAGCGGTACGGGTTCGCTGCCATGTCCCTGCTCCGACAGGTGCTCATGA
GCGGGCTGTACTCCACCAAGTACATCGGAGGGTTCGACATCTCCAAGCAG
AGGCGGGTGGAGAGTGACACCCCGGGGCCGATACAGCTCGTGCCCGCCGA
CCGGCAGAGGAGGGCGCTGACGCTGGTGCTGAGGGTGGTGACGGGAGACG
AGCCGGCGGGGGGCGCCGCCTTCCTTCCCGGAGAGGAGGACTTCTCCAAC
CTGGCGGCCTGGTCAGGGTCCTGCGCGGGGCTGGGGCAGTACTGCTACGG
CGTCGTGCCGGTGGACGTCTTGAGCGAGGTGAACGCCTTGAGAAAATCGG
TGCTTCTCCAGGCCTTCTCCGTCGACCACATCATGCGGCTGCGCTTGCAC
TCCTGGGCTAGCGGGGCAGGCGGCGTGGACACGCTCTCCGTGTCGGAGAT
GTTCGAGAGCGCGACAAACGCCGTGTGGGGCGACGAGGGCTTCGGCAGCG
CCCGCGCGAAACTGTGGCAGAACTGGGACCTGATGCTCTTCTGGCTGGAG
GTGTTGCAGGCGAGTGCGTACGGATCGGCCGGTGTAGAGTCTGTCGTCCC
GGGAGACGTTGCGGCCACCGCTGTGGGCCTTGTCTACTCTCTCATGGACA
CCGGCAAGAACTTGACGTCCGCCGATGCGGCCTACGGCCTCCACCGCGCC
GCCGCCCTCAAGCACGGGGTGTGGGAGGAGAGGGGCAACACGGATGGGGT
TATTCTGTGGCAGCTGGGGGGATTGAAGTAG
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