mRNA_Ecto-sp13_S_contig7030.18081.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7030.18081.1
Unique NamemRNA_Ecto-sp13_S_contig7030.18081.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: D7G1K2_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K2_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 2.130e-158
Identity = 208/221 (94.12%), Postives = 213/221 (96.38%), Query Frame = 1
Query:    1 PLLKMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQDSVVEVEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            PLLKMLWRTGYMQCPE C L VTPWEDCACTCSEENFNGM+SWEVLQDAGVLA+GFFYDKDGVLIEDL+DSDGNAFDILPGYTK ETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSK+DTVFDETWI DHFCYGHNPDDIQPFRNLFL DSVVEVEEHGGK+IEIPK YYTN QLYAMLKPDKMDSPYVYDNFEWGHCD
Sbjct:  346 PLLKMLWRTGYMQCPETCALDVTPWEDCACTCSEENFNGMNSWEVLQDAGVLAEGFFYDKDGVLIEDLVDSDGNAFDILPGYTKGETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKDDTVFDETWIPDHFCYGHNPDDIQPFRNLFLHDSVVEVEEHGGKKIEIPKAYYTNMQLYAMLKPDKMDSPYVYDNFEWGHCD 566          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: A0A6H5KKI9_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI9_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 1.200e-137
Identity = 186/221 (84.16%), Postives = 199/221 (90.05%), Query Frame = 1
Query:    1 PLLKMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQDSVVEVEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            PLLKMLWRTGY+QCPEEC   VTPWEDCACT            EVLQDAGVLADGFFYDK+GVLI+DL+D+DGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRL+V ++NDT FDETWI DHFCYGHNPDDIQPFRNLFL D+VV+VE+HG KQIEIPKVYYTNSQLYAMLKPD+MD PYVY+NFEW HCD
Sbjct:  539 PLLKMLWRTGYIQCPEECAFGVTPWEDCACTXXXXXXXXXXXXEVLQDAGVLADGFFYDKNGVLIKDLVDNDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLQVKAENDTAFDETWIPDHFCYGHNPDDIQPFRNLFLHDNVVQVEQHGDKQIEIPKVYYTNSQLYAMLKPDEMDGPYVYENFEWRHCD 759          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: D7FSN5_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN5_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 2.890e-76
Identity = 127/256 (49.61%), Postives = 155/256 (60.55%), Query Frame = 1
Query:    1 PLLKMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADG---FFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFL----------------QDSVVEVEEHGGKQ----------------IEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            PL+K LWRT Y+QC   CD SV+ W DC CT S E   G +  EVL+ +GVL+D    FFYD+D  L+++L D  G+A D +PGYT +ET  I+ EMLR L  PMR+G+HY  TSTND TFW++HPT DRLWHL RLE    N   FDETW  DHFCYGHNP D+QPF +LFL                +D     +E GG++                I  PK YYTN  LY +LKPD M  PY+Y +FEW HCD
Sbjct:  350 PLMKYLWRTEYLQCETTCDFSVS-WADCRCTLSAEAVAGQTPSEVLESSGVLSDAAGAFFYDEDLKLVDNLTDEQGHAHDRIPGYTADETKGIFTEMLRLLSTPMRIGSHYEGTSTNDVTFWVLHPTMDRLWHLNRLE--DVNGEGFDETWRDDHFCYGHNPADVQPFHDLFLGQATGKGGHDQQRRAMRDERDAAKESGGEEQAAGAGTSGGSSGCGSIAPPKAYYTNQMLYELLKPDGMSIPYMYAHFEWPHCD 602          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: A0A6H5JTC5_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC5_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 2.070e-66
Identity = 106/221 (47.96%), Postives = 145/221 (65.61%), Query Frame = 1
Query:   10 KMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQDSVVE---VEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            K++WR   ++CPE C      W+DC C CS+    G ++ E L+   V+A G+FYD D  L+ +L DSDG+ ++ +P Y+ EE+  IY+ +  ALCIP +VG+H+ ATSTND TFW++HPTFDRLWHL  LE     +  F+ETWI+D  C GHN DD+QPF +LFL++   E   V   GG+ +   K +YTN++LY +L P  M  PYVYDNF W HCD
Sbjct:  527 KIMWRENAIECPESCTFDQG-WKDCQCQCSQSLMEGRTAAEFLELGDVIATGYFYDADYQLVLELADSDGHYYEEIPSYSAEESTAIYEGLKDALCIPTKVGSHFEATSTNDVTFWVLHPTFDRLWHLSLLE----QNPGFNETWISDSTCVGHNADDVQPFHDLFLEEHEGEPDVVGSAGGESVGPLKGHYTNAELYDLLHPAGMQLPYVYDNFAWPHCD 742          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: A0A7S2BER4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BER4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.640e-65
Identity = 96/222 (43.24%), Postives = 137/222 (61.71%), Query Frame = 1
Query:    1 PLLKMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLL-DSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQDSVVEVEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            PL ++LWR   ++CP+ CD++  P +DC CTCSEE   G +S+E+L  +G+L    ++D DG L++    +S G     LP YT EE++ IYD +L+  C P ++G  Y + S ND TFW++HPT +R+WH  R+  +     V++ETW   H CYGHNPDD+QPFRNLF  ++                 YY+NS LY++L P   D PY+YDNFEW HC+
Sbjct:   51 PLARILWRNDLLECPDSCDMTTDP-KDCMCTCSEEKMAGRASYEILDSSGILESVEYFDHDGHLLDSFYNESTGKIEYSLPHYTHEESMDIYDGLLKLCCAPGKIGDQYDSNSPNDVTFWMLHPTMERIWHYMRMAPV-----VYNETWDPYHTCYGHNPDDLQPFRNLFDDNNE----------------YYSNSDLYSLLHPQNEDLPYIYDNFEWPHCE 250          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: A0A7S2BC73_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BC73_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.650e-63
Identity = 99/222 (44.59%), Postives = 134/222 (60.36%), Query Frame = 1
Query:    1 PLLKMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLLDSDGNAFDI-LPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQDSVVEVEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            PL +MLWR   +QCPE C +S+ P E C CTCS+    G  S+E+L  +G+L    F+D DG L+    +      +  L GYT ++T+ IYD +L+  C P ++G +Y ++S ND TFW +HPT DRLWH  RL   SK   V++ETW   H CYGHNPDD+QPF+NLF  ++                 YYTNS+LY +L P  +  PY+YDNFEW HC+
Sbjct:   18 PLARMLWRADLLQCPEHCPMSMAPSE-CMCTCSKTALAGRPSYEILDSSGILESVEFFDADGHLLSSFYNESTEKIEYSLSGYTVDKTMHIYDGLLKLSCAPGKIGDNYDSSSPNDLTFWFLHPTIDRLWHYMRL---SKR--VYNETWDPYHTCYGHNPDDLQPFKNLFDNNNE----------------YYTNSELYTLLHPKNIHLPYMYDNFEWPHCE 217          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: D7FNR4_ECTSI (Tyrosinase-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR4_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 3.370e-63
Identity = 102/220 (46.36%), Postives = 134/220 (60.91%), Query Frame = 1
Query:    4 LLKMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQ-DSVVEVEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHC 660
            L K LWR+G++ CP+ C +  TPWEDC C C        S+ +VLQ++GVL    +YD  G LI    D +G+    LPGY++EE+ QIY +++  LC P  +GT + ATSTND TFW++HP+ DRLWHL+RL         F+ETW + H C  HNP D+QPF  +F   D     EE         K YYTN +LY +L+PD+ D PYVYDNF W HC
Sbjct:  444 LSKELWRSGFLDCPDTCSMD-TPWEDCQCQCDAGAIGSRSAAQVLQESGVLDSVSYYDSTGELISSFKDENGDVLYTLPGYSEEESTQIYQQLMYLLCSPGHIGTMFQATSTNDITFWVLHPSVDRLWHLKRL-----GSEEFNETWDSFHDCVCHNPADLQPFHGMFPDWDDEHAEEEEDSAASPSAKRYYTNMELYGLLRPDQSDLPYVYDNFAWPHC 657          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: D8LAY9_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY9_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 1.250e-56
Identity = 99/221 (44.80%), Postives = 131/221 (59.28%), Query Frame = 1
Query:   10 KMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQDSVVE---VEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            K+LWR   ++CPE C      W+DC C CSE    G S+          A+G +Y++                  +P Y+ EE+  IY+ +  ALCIP +VG+H+ ATSTND TFW++HPTFDRLWHL RLE     + VF+ETWI+D  C GHN DD+QPF +LFL++   E   V   GG+ +   K YYTN++LY +L P  M  PY+YDNF W HCD
Sbjct:  456 KILWRENAIECPESCTFDQG-WKDCQCKCSESLMEGRSA----------AEGHYYEE------------------IPNYSAEESTAIYEGLKDALCIPTKVGSHFEATSTNDVTFWVLHPTFDRLWHLSRLE----QNPVFNETWISDSTCVGHNADDVQPFHDLFLEEHEGEPDVVGSAGGEGVGPLKGYYTNAELYDLLHPAGMQLPYMYDNFAWPHCD 643          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: A0A6H5JFW1_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFW1_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.650e-55
Identity = 107/254 (42.13%), Postives = 138/254 (54.33%), Query Frame = 1
Query:   10 KMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLA-DGFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWI-ADHFCYGHNPDDIQPFRNLFLQD-----SVVEVE---------EHGGKQIE--------------------IPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            K LWR  Y+ CP+ C   V PW +C C+C     +G S  EVL+DAG+L+   FFYDK   LIE+L   +    D L GYT +E+  I+ E LR +C P   GT Y ATST DP FW+IHPT +RLW LRRL+     D  FD+TW+ ++  C+G+NP D  P  +LF        SV+E            HGG   +                     PK YYTN++LY +L P+  + PYVYDNFEW HCD
Sbjct:  298 KELWRADYLVCPKSCSYDV-PWVECQCSCDATALSGKSPLEVLKDAGLLSGSSFFYDKHLELIENL---EATQEDTLAGYTAQESEDIFHEALRVMCTPSVEGTSYEATSTIDPIFWVIHPTIERLWQLRRLQ-----DDAFDDTWVPSESVCFGNNPGDALPLHDLFASSRDASHSVLEASYPAGVGGTVRHGGASRDQHQTGGVGLRGGRVAGGVASSPKKYYTNAELYQLLDPNGDEVPYVYDNFEWPHCD 542          
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Match: A0A7S2BKJ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKJ3_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.400e-54
Identity = 94/220 (42.73%), Postives = 131/220 (59.55%), Query Frame = 1
Query:    4 LLKMLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLADGFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRVGTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFCYGHNPDDIQPFRNLFLQDSVVEVEEHGGKQIEIPKVYYTNSQLYAMLKPDKMDSPYVYDNFEWGHCD 663
            L K LWRTG+++CP  CD+  T W+ C C    +   GM+S+E+L  +GVL    +YD +G LI    D +G+A+  LPGY++ E+ +I+D++L  L  P  +G  + ATS+ND TFW++H T DRLWH +RL     N   +DETW   H CYGHNP + QPF+NLF  +                  YYTN +LY  L+PDK    Y+YD F+W HC+
Sbjct:  446 LAKELWRTGFIKCPTTCDMD-TAWQKCQCIFDPKEGEGMTSYEILDVSGVLQAVEYYDAEGHLINTWYDVNGSAYYQLPGYSEMESRKIHDQLLEMLSSPGHIGDMFQATSSNDITFWVLHGTVDRLWHFKRLG----NTENYDETWDPYHTCYGHNPSNFQPFKNLFDDEDR----------------YYTNEELYQNLRPDKPQLSYIYDGFKWPHCE 644          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7030.18081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1K2_ECTSI2.130e-15894.12Hypothetical tyrosinase-like protein F21C3.2 in ch... [more]
A0A6H5KKI9_9PHAE1.200e-13784.16TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FSN5_ECTSI2.890e-7649.61Putative scytonemin-related tyrosinase n=1 Tax=Ect... [more]
A0A6H5JTC5_9PHAE2.070e-6647.96TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2BER4_9STRA2.640e-6543.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2BC73_9STRA1.650e-6344.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7FNR4_ECTSI3.370e-6346.36Tyrosinase-like protein 2 n=1 Tax=Ectocarpus silic... [more]
D8LAY9_ECTSI1.250e-5644.80Putative scytonemin-related tyrosinase n=1 Tax=Ect... [more]
A0A6H5JFW1_9PHAE1.650e-5542.13TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2BKJ3_9STRA1.400e-5442.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7030contigEcto-sp13_S_contig7030:4663..7633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score216.5
Seed ortholog evalue1.3e-53
Seed eggNOG ortholog2880.D7FNR4
Model size663
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Common central domain of tyrosinase
EggNOG OGs2CZRH@1,2SBDH@2759
Ec32 ortholog descriptionTyrosinase copper-binding domain
Ec32 orthologEc-07_001340.1
Cds size651
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7030.18081.1prot_Ecto-sp13_S_contig7030.18081.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7030 4663..7621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463964.4036381-CDS-Ecto-sp13_S_contig7030:4662..47731681463964.4036381-CDS-Ecto-sp13_S_contig7030:4662..4773Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7030 4663..4773 -
1681463964.416123-CDS-Ecto-sp13_S_contig7030:5198..53701681463964.416123-CDS-Ecto-sp13_S_contig7030:5198..5370Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7030 5199..5370 -
1681463964.4320626-CDS-Ecto-sp13_S_contig7030:6152..63161681463964.4320626-CDS-Ecto-sp13_S_contig7030:6152..6316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7030 6153..6316 -
1681463964.444537-CDS-Ecto-sp13_S_contig7030:6752..68361681463964.444537-CDS-Ecto-sp13_S_contig7030:6752..6836Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7030 6753..6836 -
1681463964.4532845-CDS-Ecto-sp13_S_contig7030:7501..76211681463964.4532845-CDS-Ecto-sp13_S_contig7030:7501..7621Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7030 7502..7621 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463964.4625223-UTR-Ecto-sp13_S_contig7030:7621..76331681463964.4625223-UTR-Ecto-sp13_S_contig7030:7621..7633Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7030 7622..7633 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7030.18081.1

>prot_Ecto-sp13_S_contig7030.18081.1 ID=prot_Ecto-sp13_S_contig7030.18081.1|Name=mRNA_Ecto-sp13_S_contig7030.18081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
MLWRTGYMQCPEECDLSVTPWEDCACTCSEENFNGMSSWEVLQDAGVLAD
GFFYDKDGVLIEDLLDSDGNAFDILPGYTKEETVQIYDEMLRALCIPMRV
GTHYGATSTNDPTFWLIHPTFDRLWHLRRLEVMSKNDTVFDETWIADHFC
YGHNPDDIQPFRNLFLQDSVVEVEEHGGKQIEIPKVYYTNSQLYAMLKPD
KMDSPYVYDNFEWGHCD
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mRNA from alignment at Ecto-sp13_S_contig7030:4663..7633-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7030.18081.1 ID=mRNA_Ecto-sp13_S_contig7030.18081.1|Name=mRNA_Ecto-sp13_S_contig7030.18081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2971bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7030:4663..7633- (Ectocarpus species13 EcNAP12_S_4_19m)
CCACTGCTGAAGATGCTGTGGCGCACGGGGTACATGCAGTGCCCGGAGGA GTGCGATCTCAGCGTTACCCCTTGGGAGGACTGCGCATGCACCTGTTCCG AGGAAAACTTCAACGGCATGAGCTCGTGGGAGGTGAGAGCCGCCGCCGCC GCCGCCGCGCCTTGGGGCGTCTTGTGTCTTGCTTGCTTTGAACTGCTCTC TCCTGGGAGTCAGTCATGGCTCCGATAAAAGAGGGTGCTGTGACAAAGGC CTTCGACCCTCTTATATCGGAATCCCCTCTCAAACCGGAATAATAGAGTA CGCAGGTATTCTGAAGGGGTTCGAGTCCGTGGCAACCGATTTCGACCATC TTGCATATGTCGGAACCCCCTATTTTCTAAGGCATCCTCGTATATCCGAG ACACGACTGCTGTCGGTAGCTTTCAAGTTTCCCACATTTCCACATTCCGG CTTTCCACAGATTTCCAATCTTTTTCCTGGTTCCAATTTTTTCGGTGCCA GTAGTCTCCGAATTTCCATTTTTTTTCCTCGGCCGCAAATCGAGGTTCAA CCGTCCACGGATTTGGAGATTTGGAAATTCGGAAGCAATTTTTGCAGTTT TGGAACCAAATCGCAGTAATATATGACGGCCGTAAGGAAGGTACAACGGG CGCCTCCTTCCCCCTGGGAGACCCAAAAGGTAGGGTGTCGTATTACAAGT GGCGAAGAACGGCTTGCGCGTGTAATGATGGAAGAAGCAACCCGCCGGAA GACTACACCCCCCCCTCCCCCGGCCTCGCCCTCGTGATCTGTTGCAGGTC TTGCAAGACGCAGGAGTGCTGGCCGACGGGTTCTTCTACGACAAGGACGG CGTTCTCATCGAGGACCTTCTAGACAGCGACGTGAGTCTGGCAGCTGACC ACCAGCACCTCCTATTTTGGTGTTGCGCGCGATACATGTCCCTCTCCCCG GATGCGTCCGATAGACGATTAGCAGCGCTGTTTGTGTCTGGCGTCGAGAT AGGTGAAGATACCTCTGCACCCTACCGCTGAATCCTGTCCATCCTGTTCT ATAATGTTTTTTCGAGCCTGCGACACATATTTTCCTCGCCCGATGTTGAT CGCTTTCTTTTGGCGTTTCATGGAGATATACGACACACCGTATAGATACG TCCGCTGATGTTCGCTCCCCGCATGAAGAAAATCCTACCGTAGACCCTGC TGTGGGAAGCCCCCCAAAGCCTCAATGCCAGGTTTAGTCTGAAGCTCTCA GCCAAGCGTTGACGGCGTTCCCCTCCCGCCTACCCATCAAATGATATTTA CTCTTCCTCACCACCAGGGCAACGCCTTCGATATTCTTCCGGGATACACC AAGGAAGAGACAGTGCAGATCTACGACGAGATGCTGCGGGCCCTGTGCAT CCCTATGCGCGTCGGCACTCACTACGGCGCGACAAGCACCAACGACCCCA CGTTCTGGTTGATTCACCCGACGTTCGACAGGTGCGTCACGATTTGTGTG TATGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG TCTGTCTGTCTGTCTGTCTGTCTTGTCTGTCTGTCTGTCTGTCTGTCTTG TCTGTCTTGTCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGTCAGTCACT CACTCTCGGCCTCGTTGTCTCTGTCTGTCGCTCGCTGCCTCTCTCTCTGC GCGTCCACGTCTGTCTCCCTCGCTTTCTGTGTATACGCTTTTCTGACCAC GTGTAGGTTTGAAAATTCACTGCGCCAACCCATCACCATTCTCAACAGAT GCTTACCACTCCGACTTGTGTTTAACGTTGTCGTGCCAGCCGTTTTTGTA CTTCCTGATGTCTGCTCGTGTGCGAGGGAGGTTGGTCTCGTACCGATTAC GTGAAGTTGTAGACAGGCATTCCCCTCACCCTTGCTTGCTTCTTTTCTTT CTTCTCCGAAGGGGGTGTTGTTGCCGTCAGCACCAACACCGACCGATGAC GGCGAACGGAACCCTAACCCTAGTCCGCGCGCAACAGGCAAACCAACCTA CAAAACAGCAACGGCAGCGAGTAGACAGCAAAGTGAGCACCCAGCGATGC CAATTTCCACAGTAACAATAGCACACGAAATAAATAAAACATATATTTAC AACGTTGTCACGCGAGCAAGAACCAACGCACCACCGCACCACGAACTACG AATATATTGCCAGGCTTTGGCACTTGCGAAGGCTCGAGGTCATGTCGAAG AACGACACGGTCTTCGACGAGACGTGGATCGCAGACCACTTCTGCTACGG CCACAACCCCGACGACATCCAGCCGTTCCGGAACCTGTTCCTTCAAGACA GTGTGGTTGAAGTTGAAGAACACGGGGGCAAGCAGGTTTGTCTTTTGTTT TTCGTTTGGTTTTTCTTAGTTGCTTGCCCGTGTGTGCGCGCGCGCTATCT GCGTGTTTTTTTAAGTTTAAGAACACGGTTATGCGTACAAAAAGGTAATT TCGTAAGGATCCTGTGTTGCTGGCGTGCGTCTTCGTCGGCGTTTTGTGTG GAGGATGCCGTTTGTTTGGAGGGCGGTTGGTCGAATGTGGACGTGGATAG TTGGGCAGTCATGTGATGCAGCTGCTGTTGAAGGCTTTCGTCCCTCGCAC GTGCTCTTCGGAGGCATGTACAGTGCACACACTGGCTTGGCGTCGAAACC TTTGCTTGGAAACATTACAGCTGTTTTATGCTCGGAAACCGTTCGTTTTG ACGTGTCATCGCTTGCGCTCACCACCCCGAACCACGTTTTCATCGTCTGG CCGGTACCAGATTGAGATCCCGAAGGTCTACTACACCAACTCGCAGTTGT ATGCCATGCTCAAGCCGGACAAGATGGACAGCCCTTACGTCTACGACAAC TTCGAGTGGGGACACTGCGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7030:4663..7633-

>mRNA_Ecto-sp13_S_contig7030.18081.1 ID=mRNA_Ecto-sp13_S_contig7030.18081.1|Name=mRNA_Ecto-sp13_S_contig7030.18081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=651bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7030:4663..7633- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTGGCGCACGGGGTACATGCAGTGCCCGGAGGAGTGCGATCTCAG
CGTTACCCCTTGGGAGGACTGCGCATGCACCTGTTCCGAGGAAAACTTCA
ACGGCATGAGCTCGTGGGAGGTCTTGCAAGACGCAGGAGTGCTGGCCGAC
GGGTTCTTCTACGACAAGGACGGCGTTCTCATCGAGGACCTTCTAGACAG
CGACGGCAACGCCTTCGATATTCTTCCGGGATACACCAAGGAAGAGACAG
TGCAGATCTACGACGAGATGCTGCGGGCCCTGTGCATCCCTATGCGCGTC
GGCACTCACTACGGCGCGACAAGCACCAACGACCCCACGTTCTGGTTGAT
TCACCCGACGTTCGACAGGCTTTGGCACTTGCGAAGGCTCGAGGTCATGT
CGAAGAACGACACGGTCTTCGACGAGACGTGGATCGCAGACCACTTCTGC
TACGGCCACAACCCCGACGACATCCAGCCGTTCCGGAACCTGTTCCTTCA
AGACAGTGTGGTTGAAGTTGAAGAACACGGGGGCAAGCAGATTGAGATCC
CGAAGGTCTACTACACCAACTCGCAGTTGTATGCCATGCTCAAGCCGGAC
AAGATGGACAGCCCTTACGTCTACGACAACTTCGAGTGGGGACACTGCGA
T
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