mRNA_Ecto-sp13_S_contig7025.18077.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: A0A6H5L3V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V0_9PHAE) HSP 1 Score: 686 bits (1771), Expect = 1.730e-230 Identity = 442/563 (78.51%), Postives = 462/563 (82.06%), Query Frame = 1
Query: 10 TSSGFEIDTSGLNKGFSVSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGAVEEASSSAPEWKTGAIASGDESGSTSLSDVLGDDSGVDVEDKTMAAAMVETGASLAGEGESFSRESATAAAEEEDKEGEEAATGESEPSGVSSMVTDAGDAAVREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DKLPSSPEGDDPASAAVEHAEVSGEEVGEGEEVLASPSTLAALQEKERRDAEAREELDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISEKYEALLSEQKERYDGETGRALREQEKELSAEFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELQRRHADIVAELKAQDLDRSEKVVAELRKLSHKAESKIMEVEAARNAEEAERLASERVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPANAAAKGIPTVSQLKQRH--VFGSNSRLVDGCSREARVAP 1683
TSSGFE+ TSGLNKGFSVST DG VE ASSSAPEWKTGAIASGD+SGSTSLSD LGDD VDVED MAAAM+E GASL GEGESFSRESATAAAE++ +EGEE AT E E SGVSS+VTD GDAAVREAE XXXXXXXXXXXXXXXXX D+L SSPE DDPASA+VEHAEVSGEEVGEGEE LASPS LAALQEKERRDAEAREELDG KRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEIS+KYEALLSEQKERYDGET RALREQEKELSA+FVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQEL+RRHAD+VAELKAQDLDRSEKVVAELR+LSHKAESKIMEVEAARNAEEAERLASE+VHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPA+AAA+GIPTVSQLKQRH +FG +V R A + P
Sbjct: 188 TSSGFEVGTSGLNKGFSVSTSPPEGNSSSSRSSSSNDKGNSALDTPHQPAAWEDTAAA-DGVVEAASSSAPEWKTGAIASGDDSGSTSLSDFLGDDFEVDVEDTAMAAAMMEAGASLTGEGESFSRESATAAAEKKGEEGEEGATDELESSGVSSLVTDGGDAAVREAEALLKEAEAAXXXXXXXXXXXXXXXXXATSSIETLSAGSSDESSGDELASSPERDDPASASVEHAEVSGEEVGEGEEGLASPSALAALQEKERRDAEAREELDGTKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISDKYEALLSEQKERYDGETARALREQEKELSAQFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELERRHADVVAELKAQDLDRSEKVVAELRELSHKAESKIMEVEAARNAEEAERLASEKVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPADAAARGIPTVSQLKQRHAILFG----IVKAECRRAALVP 745
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: D7FKC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC6_ECTSI) HSP 1 Score: 622 bits (1603), Expect = 8.870e-209 Identity = 412/460 (89.57%), Postives = 426/460 (92.61%), Query Frame = 1
Query: 313 EDKTMAAAMVETGASLAGEGESFSRESATAAAEEEDKEGEEAATGESEPSGVSSMVTDAGDAAVREAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DKLPSSPEGDDPASAAVEHAEVSGEEVGEGEEVLASPSTLAALQEKERRDAEAREELDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISEKYEALLSEQKERYDGETGRALREQEKELSAEFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELQRRHADIVAELKAQDLDRSEKVVAELRKLSHKAESKIMEVEAARNAEEAERLASERVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPANAAAKGIPTVSQLKQRHVFGSNSRLVDGCSREARVAP 1683
EDK MAAAMV TGASLAGE ESFSRESATAAAE++++EG EAATGESE SGVSSMVTD+GDAAVREAE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DKL SSPEGDDPASAAVEHAEVSGEEVGEGEE LASPSTLAALQEKERRDAEAREELDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEIS+KYEALLSEQKERYDG TGRALREQEKELSAEFVEKYGAELRVHLEHQANEF EALHANAVAGREALEQEL+RRHAD+VAELKAQDLDRSEKVVAELR+LS+KAESKIMEVEAARNAEEAERLASE+VHRVTHATLSL ERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPA+AAAKGIPTVSQLKQR FG +V R A + P
Sbjct: 53 EDKAMAAAMVATGASLAGERESFSRESATAAAEKKNEEGAEAATGESESSGVSSMVTDSGDAAVREAEALLKEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGDKLASSPEGDDPASAAVEHAEVSGEEVGEGEEGLASPSTLAALQEKERRDAEAREELDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISDKYEALLSEQKERYDGATGRALREQEKELSAEFVEKYGAELRVHLEHQANEFTEALHANAVAGREALEQELERRHADVVAELKAQDLDRSEKVVAELRELSNKAESKIMEVEAARNAEEAERLASEKVHRVTHATLSLAERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPADAAAKGIPTVSQLKQR--FG----IVKAECRRAALVP 506
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: A0A835YW45_9STRA (Mitochondrial inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW45_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.460e-20 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 2
Query: 2243 RRFGIVKAECRRAALVPEQAGNGMMGHLVASALAKITFAPKGMVEGDEAEGVLARADHLLEAGELQSAVGELEKLHGLPADVAMDWLKDAKTRLTADEALRVIRCHASILNAEHLKALDGKA 2608
RRF V+ E RAALVP G G+MG V + L+ T GMVEG A+ VLARA+ LL+ G+L+SAV EL +L GL A A DW++DA+ RL AD+A+R +RC S L+ +D ++
Sbjct: 553 RRFARVRGEAARAALVPGGDGAGVMGQAVGALLSVFTLPRHGMVEGSSADDVLARAECLLDGGDLRSAVKELSRLEGLAAVTARDWVQDAEARLRADDAMRALRCRCSTWQYWGLRRVDEES 674
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: W7TLX9_9STRA (Mitochondrial inner membrane protein Mitofilin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLX9_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.420e-18 Identity = 109/339 (32.15%), Postives = 170/339 (50.15%), Query Frame = 1
Query: 724 EGEEVLASPSTLAALQEKERRDAEAREE----LDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISEKYEALLSEQKERYDGETGRALR--EQEKELSA-EFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELQRRHADIVAELKAQ--------DLDRSEKVVAELRKLSHKAESKIMEVEAARNAEEAERLASERVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPANAAAKGIPTVSQLKQRHVFGSNSRLVDGCSREARVAPFCDP 1695
EGE A T +AL R+ AEA + + + + +R + L+ AEE L+ LEQ++LKDL L ++L+ RV QL ELQERTKWEALRL + V+K E E+S KY L+ + +E E GR R E EK+++ + +E+ + LE + F AN A A EQE + A + A+ K + + + L +L + + ++ +EA + S +VHRV+ A L+ SS P+++E+ L+ + GDP+L+A +P AA++G+PT S+L+ R +V +REA P P
Sbjct: 70 EGENKAAGAPTESALG---RKQAEAALKHFAGYESRGKELRFDTLTRAAEEALAQGEALRNHLEQTLLKDLAVLSNEALQLRVVQLVGELQERTKWEALRLHEAVRKAEMEVSGKYVELIRKLREESVEEVGRQSRALEAEKQVALLKAMEEKDKACKTLLEEEMRSFT----ANVTA---AFEQERAQDRALVEAQAKRELENVLYERETGYQAALAGRLEELG-RLKGEVEALEAVFETDTDYEHVSWKVHRVSAALLAFELALQSSQPLRREIAALQHVTKGDPVLDAVLAGLPP-AASEGVPTPSELQVRFP------MVQKAAREAAFVPESSP 390
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: A0A5D6XY43_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY43_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.770e-18 Identity = 50/117 (42.74%), Postives = 78/117 (66.67%), Query Frame = 2
Query: 2228 VTLL*RRFGIVKAECRRAALVPEQAGNGMMGHLVASALAKITFAPKGMVEGDEAEGVLARADHLLEAGELQSAVGELEKLHGLPADVAMDWLKDAKTRLTADEALRVIRCHASILNA 2578
V+ L RF +VK RAAL P AG ++G L SAL+ + P G +EGD+ + V +RAD+ L+AG+++SA+GEL+ L G+PA VA DW+ A++RL ++ +V++ H ++L A
Sbjct: 582 VSQLQERFVVVKKVAHRAALAPADAG--LVGQLFGSALSLLMIPPGGPIEGDDTDAVFSRADYALKAGDIESALGELKALSGVPAQVAQDWVAAAESRLAVEQTAKVVKAHVALLAA 696
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: A0A7S3Y895_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y895_HETAK) HSP 1 Score: 95.5 bits (236), Expect = 7.330e-18 Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = 2
Query: 2246 RFGIVKAECRRAALVPEQAGNGMMGHLVASALAKITFAPKGMVEGDEAEGVLARADHLLEAGELQSAVGELE----KLHGLPAD--VAMDWLKDAKTRLTADEALRVIRCHASILN 2575
RF V RRAALVPE AG G G L+ S LA +T P+G V+G A+ LAR H L AG+L++AV E E G PA V DW+KDAK RL A++AL+++ H ++LN
Sbjct: 154 RFAGVHEAARRAALVPEGAGGGAWGQLLGSLLALVTIRPQGDVQGAGADEALARVSHRLAAGDLRAAVAEAEGPALAARGNPAVALVVRDWIKDAKLRLQAEQALKILNAHTALLN 269
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: K8ZAZ5_NANGC (Mitochondrion protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAZ5_NANGC) HSP 1 Score: 96.3 bits (238), Expect = 1.380e-16 Identity = 108/339 (31.86%), Postives = 169/339 (49.85%), Query Frame = 1
Query: 724 EGEEVLASPSTLAALQEKERRDAEAREE----LDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISEKYEALLSEQKERYDGETGRALR--EQEKELSA-EFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELQRRHADIVAELKAQ--------DLDRSEKVVAELRKLSHKAESKIMEVEAARNAEEAERLASERVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPANAAAKGIPTVSQLKQRHVFGSNSRLVDGCSREARVAPFCDP 1695
EGE A T +AL R+ AEA + + + + +R + L+ AEE L+ LEQ++LKDL L ++L+ RV QL ELQERTKWEALRL + V+K E E+S KY L+ + +E E GR R E EK+++ + +E+ + LE + F AN A A EQE + A + A+ K + + + L +L + + ++ +EA + S +VHRV+ A L+ SS P+++E+ L+ + GDP+L+A +P AA++G+ T S+L+ R +V +REA P P
Sbjct: 273 EGENKTAGAPTESALG---RKQAEAALKHFAGYESRGKELRFDTLTRAAEEALAQGEALRNHLEQTLLKDLAVLSNEALQLRVVQLVGELQERTKWEALRLHEAVRKAEMEVSGKYVELIRKLREESVEEVGRQSRALEAEKQVALLKAMEEKDKACKTLLEEEMRSFT----ANVTA---AFEQERAQDRALVEAQAKRELENVLYERETGYQAALAGRLEELG-RLKGEVEALEAVFETDTDYEHVSWKVHRVSAALLAFELALQSSQPLRREIAALQHVTKGDPVLDAVLAGLPP-AASEGVLTPSELQVRFP------MVQKAAREAAFVPESSP 593
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: A0A7R9YBK3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBK3_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.400e-14 Identity = 95/324 (29.32%), Postives = 152/324 (46.91%), Query Frame = 1
Query: 802 EELDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISEKYEALLSEQKERYDGETG-----------RALREQEKELSAEFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELQRRHADIVAELKAQDLDRSEKVVAELRKL-SHKAESKIMEVEAARNAEEAERLASERVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGG-DPLLEAAAESIPANAAAKGIPTVSQLKQRHVFGSNSRLVDGCSREARVAP----FCDPIWAFVAFFL 1722
E+ + + R +R L EE+ + L+RELE + L D + + LR RVA L T LQERT++EALR+ + +++ E E + KY ALL +Q++ E RA E + ++ EKY AELR+ ++ + + A+ D V EL + +++ AE+ L S AE+K ++ ++ VH++T A LSL ++F ++ P +E + L RL+ P + + E +P +A KGIPT+ QL+ R R+ E+ V P F I A V FL
Sbjct: 2 EQAETRARELRLRELEFTTEEVTALNVALRRELEATFLADAHTVGIEELRNRVASLVTILQERTRYEALRISEALRRAEEESARKYNALLEDQRKNLTMELNEHRQAMQLADVRAREEALALMKSQMEEKYQAELRLRTGDMERLLQQQIRRQELEFNAAV--------LDKVKELTDSRSEAYKQMAAEVGLLRSSVAETKALDAKSLE------------VHKITAAALSLAQKFETNEPFLQEANTLARLSSSAGPEISSLIEELPQDAMKKGIPTLPQLQYRF-----DRVKRAARHESNVPPEMPGFGGQIVASVTTFL 300
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: K3WP83_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP83_GLOUD) HSP 1 Score: 84.0 bits (206), Expect = 9.930e-13 Identity = 75/256 (29.30%), Postives = 137/256 (53.52%), Query Frame = 1
Query: 895 ELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISEKYEALLSEQKERYDGETGRALREQEKELSAEFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELQR---RHADIVAELKAQDLDRSEKVVAELRKLSHKAESKIMEVEAAR-----------NAEEAERLASERVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPANAAAKGIPTVSQLKQR 1620
+++++ L + +LD +SL RVAQLATE++ R+KWEA+RLM+ +++ E + +K +L Q E + + LR QE+ L+ ++ R ++ ++ + L N R A+ +LQ R + + AQ L + + E L+ + + ++ E+E+ R N+ E S +VH+ + A L+L++R ++AP++ E+ LR A DP +E A +S+P +G P+VSQL++R
Sbjct: 373 DVDKNYLNGIHELDANSLAIRVAQLATEMKHRSKWEAVRLMEALRRMEEDAQKKSSEVLKRQDELHKELVAKELRLQEELLTRKY--------RDDIDKLKKDYVQDLARNVNQQRTAILNKLQETFVREKKAIEDRYAQQLRSKSEELQET--LTKERKQRVSEMESYRAQLRALNTVLDNSSTYEAF-SHQVHKTSVAALALSDRIEAAAPLRAEIRALREAARSDPFIEVALKSLPQQVIDEGAPSVSQLQER 617
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Match: S2JMU7_MUCC1 (MICOS complex subunit MIC60 n=5 Tax=Mucor TaxID=4830 RepID=S2JMU7_MUCC1) HSP 1 Score: 83.2 bits (204), Expect = 1.320e-12 Identity = 46/122 (37.70%), Postives = 72/122 (59.02%), Query Frame = 2
Query: 2228 VTLL*RRFGIVKAECRRAALVPEQAGNGMMGHLVASALAKITFAPKGMVEGDEAEGVLARADHLLEAG-ELQSAVGELEKLHGLPADVAMDWLKDAKTRLTADEALRVIRCHASILNAEHLK 2590
+ L RF V E RRA+L+PEQ + M+ HL++ + F KG+V+GD+ E LARA++ L +L+SA E+ +L G P ++MDWL A+ L +AL ++R AS+++ K
Sbjct: 463 IASLSERFETVAREVRRASLIPEQDAS-MISHLISIVFSSFMFTKKGLVDGDDVESRLARAEYYLNTEKDLESAAREINQLTGWPKRLSMDWLDAARRHLEVKQALEIMRSQASLISMLQAK 583 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7025.18077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7025.18077.1 >prot_Ecto-sp13_S_contig7025.18077.1 ID=prot_Ecto-sp13_S_contig7025.18077.1|Name=mRNA_Ecto-sp13_S_contig7025.18077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=595bp MAAAMVETGASLAGEGESFSRESATAAAEEEDKEGEEAATGESEPSGVSSback to top mRNA from alignment at Ecto-sp13_S_contig7025:640..7614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7025.18077.1 ID=mRNA_Ecto-sp13_S_contig7025.18077.1|Name=mRNA_Ecto-sp13_S_contig7025.18077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6975bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7025:640..7614+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7025:640..7614+ >mRNA_Ecto-sp13_S_contig7025.18077.1 ID=mRNA_Ecto-sp13_S_contig7025.18077.1|Name=mRNA_Ecto-sp13_S_contig7025.18077.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1785bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7025:640..7614+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |