prot_Ecto-sp13_S_contig7024.18076.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7024.18076.1
Unique Nameprot_Ecto-sp13_S_contig7024.18076.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7024.18076.1 vs. uniprot
Match: D8LHK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHK8_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.990e-29
Identity = 62/64 (96.88%), Postives = 62/64 (96.88%), Query Frame = 0 
Query:    1 MEDGIRSPAFSRSTSASEQASVDETRQEVKQIQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQ 64
            MEDGIRSPAFSRSTSA EQASVDETRQEVK IQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQ
Sbjct:    1 MEDGIRSPAFSRSTSAGEQASVDETRQEVKVIQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQ 64
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BLAST of mRNA_Ecto-sp13_S_contig7024.18076.1 vs. uniprot
Match: A0A6H5KTQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ7_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.040e-12
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:   32 IQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQ 64
            IQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQ
Sbjct:   31 IQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQ 63
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7024.18076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHK8_ECTSI1.990e-2996.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTQ7_9PHAE3.040e-12100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7024contigEcto-sp13_S_contig7024:4013..5779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7024.18076.1mRNA_Ecto-sp13_S_contig7024.18076.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7024 4013..5836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7024.18076.1 ID=prot_Ecto-sp13_S_contig7024.18076.1|Name=mRNA_Ecto-sp13_S_contig7024.18076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
MEDGIRSPAFSRSTSASEQASVDETRQEVKQIQEGIVLVHDARRFGVSER
GLWHLDRLHSRAFQ
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