prot_Ecto-sp13_S_contig7024.18075.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7024.18075.1
Unique Nameprot_Ecto-sp13_S_contig7024.18075.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length48
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7024.18075.1 vs. uniprot
Match: A0A6H5KTQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ7_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.660e-22
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 
Query:    1 MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV 48
            MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV
Sbjct:  482 MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV 529
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BLAST of mRNA_Ecto-sp13_S_contig7024.18075.1 vs. uniprot
Match: D8LHK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHK8_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.670e-22
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 
Query:    1 MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV 48
            MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV
Sbjct:  490 MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV 537
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BLAST of mRNA_Ecto-sp13_S_contig7024.18075.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.440e-8
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:    8 ALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV 48
            ALKFLP DAAP+A+V+TDG+ + PS   YD L M+LCRHD 
Sbjct:  305 ALKFLPFDAAPLAVVLTDGVGERPSSCAYDSLLMQLCRHDT 345
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7024.18075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KTQ7_9PHAE3.660e-22100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHK8_ECTSI3.670e-22100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7M7_9STRA2.440e-863.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..48
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7024contigEcto-sp13_S_contig7024:211..354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7024.18075.1mRNA_Ecto-sp13_S_contig7024.18075.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7024 211..378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7024.18075.1 ID=prot_Ecto-sp13_S_contig7024.18075.1|Name=mRNA_Ecto-sp13_S_contig7024.18075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bp
MADAIVLALKFLPLDAAPIALVVTDGLVDYPSPTEYDGLSMRLCRHDV
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