mRNA_Ecto-sp13_S_contig70227.18074.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A1S2BYX3_9GAMM (Uncharacterized protein n=7 Tax=root TaxID=1 RepID=A0A1S2BYX3_9GAMM) HSP 1 Score: 107 bits (268), Expect = 7.770e-29 Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 1 TVLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
TV+KGSI+V YADG EETV+AGEVYYWPPGHTV VDEDYE++EFSPSDQMGEL+ HL K+
Sbjct: 59 TVVKGSIHVTYADGTEETVNAGEVYYWPPGHTVRVDEDYEAIEFSPSDQMGELMNHLEAKL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A2E2K0Q5_9GAMM (Uncharacterized protein n=1 Tax=Spongiibacteraceae bacterium TaxID=2026793 RepID=A0A2E2K0Q5_9GAMM) HSP 1 Score: 106 bits (264), Expect = 3.150e-28 Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 1 TVLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
TVLKGSI+VR+ADG EETV AGEVYYWPPGHTV VDEDYE+VEFSPS QMGE+I+HL ++
Sbjct: 59 TVLKGSIHVRFADGHEETVRAGEVYYWPPGHTVRVDEDYEAVEFSPSGQMGEVIEHLKTQL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A2N6CGX2_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2N6CGX2_9GAMM) HSP 1 Score: 103 bits (257), Expect = 7.010e-28 Identity = 45/60 (75.00%), Postives = 54/60 (90.00%), Query Frame = 1
Query: 4 VLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
++KGSI+V YADG EETV+AG+VYYWPPGHTV VDEDYE++EFSPSDQMGEL+ HL K+
Sbjct: 1 MVKGSIHVTYADGTEETVNAGDVYYWPPGHTVRVDEDYEAIEFSPSDQMGELMNHLETKL 60
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A7C2JDQ5_9PROT (Cupin domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2JDQ5_9PROT) HSP 1 Score: 104 bits (260), Expect = 1.240e-27 Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 1
Query: 1 TVLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
TVL+GSI+VRYADG EETV AGEVYYWPPGHTV VDEDYE+VEFSPS M E+I+HLA K+
Sbjct: 59 TVLRGSIHVRYADGTEETVRAGEVYYWPPGHTVRVDEDYEAVEFSPSRAMAEVIEHLASKL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A661G866_9GAMM (Cupin domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661G866_9GAMM) HSP 1 Score: 103 bits (258), Expect = 2.580e-27 Identity = 46/61 (75.41%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 1 TVLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
TV+KGSI+VR+ADGQEETV AG+VYYWPPGHTV VDEDYE++EFSPS +MG LI+HL K+
Sbjct: 59 TVVKGSIHVRFADGQEETVSAGDVYYWPPGHTVWVDEDYEAIEFSPSGEMGHLIEHLKSKL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A193LDG6_9GAMM (Uncharacterized protein n=1 Tax=Woeseia oceani TaxID=1548547 RepID=A0A193LDG6_9GAMM) HSP 1 Score: 103 bits (257), Expect = 3.660e-27 Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 1
Query: 1 TVLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
TVLKG+I+VRYADG EETV AGEVYYWPPGHTV VDEDYE++EFSPS MGE+I HL ++
Sbjct: 59 TVLKGAIHVRYADGSEETVRAGEVYYWPPGHTVRVDEDYEAIEFSPSGPMGEVINHLQTQL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A3N5KXD8_9GAMM (Cupin domain-containing protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5KXD8_9GAMM) HSP 1 Score: 97.1 bits (240), Expect = 1.410e-24 Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 1
Query: 1 TVLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
TVL+GSI+VRYADG+EE V AGEVYYWP GHTV VDEDYE+VEFSP+ MG++I HL K+
Sbjct: 59 TVLRGSIHVRYADGREEVVRAGEVYYWPAGHTVWVDEDYEAVEFSPAGPMGDVIDHLDAKL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A7Y1UPR3_9ACTN (Cupin domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1UPR3_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 1.290e-17 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 4 VLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
V++GSI V Y DG EE V AGE+YYWP GHTV V+E VEFSP DQM E++ H+ K+
Sbjct: 60 VIEGSIRVNYEDGSEEIVDAGEIYYWPSGHTVVVEEAVRMVEFSPHDQMSEVLAHVVGKL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A7Y1SRC3_9ACTN (Cupin domain-containing protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1SRC3_9ACTN) HSP 1 Score: 79.0 bits (193), Expect = 1.820e-17 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 4 VLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
V++G I V Y DG EETV AGE+YYWP GHT+ V+E VEFSP DQM E++ H+ K+
Sbjct: 60 VIEGRIRVSYTDGTEETVGAGEIYYWPSGHTIVVEEAVRMVEFSPHDQMSEVVTHVVGKL 119
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Match: A0A7C1ATA4_9ACTN (Cupin domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7C1ATA4_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 1.860e-17 Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 4 VLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMGELIKHLAMKM 183
V++GSI V Y DG EE V AGE+YYWP GHTV V+E + VEFSP DQM +++ H+ K+
Sbjct: 34 VIEGSIRVNYEDGTEEVVGAGEIYYWPSGHTVFVEEAVKMVEFSPHDQMSQVLAHVVGKL 93 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70227.18074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig70227.18074.1 >prot_Ecto-sp13_S_contig70227.18074.1 ID=prot_Ecto-sp13_S_contig70227.18074.1|Name=mRNA_Ecto-sp13_S_contig70227.18074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp TVLKGSINVRYADGQEETVHAGEVYYWPPGHTVSVDEDYESVEFSPSDQMback to top mRNA from alignment at Ecto-sp13_S_contig70227:510..701- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig70227.18074.1 ID=mRNA_Ecto-sp13_S_contig70227.18074.1|Name=mRNA_Ecto-sp13_S_contig70227.18074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70227:510..701- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig70227:510..701- >mRNA_Ecto-sp13_S_contig70227.18074.1 ID=mRNA_Ecto-sp13_S_contig70227.18074.1|Name=mRNA_Ecto-sp13_S_contig70227.18074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70227:510..701- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |