prot_Ecto-sp13_S_contig70227.18073.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70227.18073.1
Unique Nameprot_Ecto-sp13_S_contig70227.18073.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: A0A5B0WXY5_9GAMM (SDR family oxidoreductase n=1 Tax=Pseudohalioglobus sp. NY5 TaxID=2606449 RepID=A0A5B0WXY5_9GAMM)

HSP 1 Score: 156 bits (394), Expect = 1.070e-44
Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRL 139
            M+  G G +INV SY G +    +SAYSTSK AL+RL++  A  + D+G+S F ISPGFVWTDM +E D  +R  DP+Y+GMD+ W+FP E AA LC RLA G+ADRLSGRMIHVRDDLD +++ AD+II  + Y LRL
Sbjct:  127 MLARGEGRIINVASYAGNSVGPGSSAYSTSKTALLRLTEGTAADVADAGLSAFAISPGFVWTDMGREYDQILRAQDPDYQGMDDDWVFPPEAAACLCSRLATGEADRLSGRMIHVRDDLDHMLQCADDIIANERYLLRL 265          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: A0A1Q9NBW7_9ARCH (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Candidatus Heimdallarchaeota archaeon LC_3 TaxID=1841598 RepID=A0A1Q9NBW7_9ARCH)

HSP 1 Score: 103 bits (258), Expect = 2.590e-24
Identity = 61/139 (43.88%), Postives = 90/139 (64.75%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRL 139
            M+    G +IN+GSY G+ P  +AS+YS SKAAL+R SD  A+S+ + G++VFT+SPG V TDMTK++  ++ +  P     DEAW    E  ++L ++L   D   L+GR IHV  +LD LI+++D+I  +  Y LRL
Sbjct:  137 MIANKSGTIINMGSYAGIRPLPYASSYSVSKAALIRFSDSIAESVKEYGINVFTVSPGLVLTDMTKDV--QVFKDLP-----DEAWSS-IEKISELVVQLLLKDVSSLTGRFIHVNQELDGLIQKSDKIQKEGLYTLRL 267          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: A0A2W6DLA1_9PSEU (NAD(P)-dependent oxidoreductase n=1 Tax=Pseudonocardiales bacterium TaxID=2201155 RepID=A0A2W6DLA1_9PSEU)

HSP 1 Score: 96.7 bits (239), Expect = 1.550e-21
Identity = 67/146 (45.89%), Postives = 81/146 (55.48%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHV-RDDLDALIERADEIIDQDGYALRLTMALDD 145
            MV  GRG +INV S  G+  T   SAYS SKAAL RL+DC A SLD   V+VF +SPG V T MT  +           +  D+ W  PA       L LA+G AD LSGR +H  RD+LD L+ RA  I++ D   LRL    DD
Sbjct:  132 MVQRGRGRIINVNSGFGLRGTATYSAYSVSKAALARLTDCLAQSLDGQPVAVFDLSPGLVRTAMTTTMPMWA-------DAGDDDWTSPAV-VVDAVLTLASGSADALSGRFLHAARDNLDDLVARAGAILESDARTLRLRPYGDD 269          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: A0A3D4WUN6_9ACTN (Uncharacterized protein n=1 Tax=Micromonosporaceae bacterium TaxID=1873464 RepID=A0A3D4WUN6_9ACTN)

HSP 1 Score: 94.7 bits (234), Expect = 1.380e-20
Identity = 61/144 (42.36%), Postives = 81/144 (56.25%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKE--LDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRLTMA 142
            MVT  RGC+IN+ S  G+    + SAY+ SKAAL+RL++  A    + GVSVF + PG V T M       +      P +    EA   PAE  A LC+ LA+G AD LSGR + V  D+ AL++RA EI   + Y +RL  A
Sbjct:  157 MVTRRRGCIINIASGSGLQAAPYQSAYTVSKAALIRLTETLAAETHEHGVSVFAVGPGAVLTSMADRGRASADFARWIPHFIPRIEAHATPAERPAALCVLLASGQADALSGRFVSVAMDVPALVQRAAEIQRDELYTMRLRTA 300          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: A0A6B2LZV0_9BACT (SDR family oxidoreductase n=1 Tax=Oceanipulchritudo coccoides TaxID=2706888 RepID=A0A6B2LZV0_9BACT)

HSP 1 Score: 94.0 bits (232), Expect = 1.500e-20
Identity = 65/140 (46.43%), Postives = 85/140 (60.71%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRD-DLDALIERADEIIDQDGYALRL 139
            M+   RG +I VGS +   P   ASAYS SKA L+RL D  A +L + G++VFTISPG V T+MTK++        PE    D  W  P E  A+LC+ LA+G AD L+GR IH  + DLD LI RA+EI  ++   +RL
Sbjct:  136 MIERKRGRIIMVGSNMAFWPYPVASAYSCSKAGLVRLGDNLAVALKEHGIAVFTISPGLVRTEMTKDI--------PEEFVADAEWT-PIEKPAELCVALASGKADALTGRYIHSSEHDLDELIARAEEIEGKNLQTMRL 266          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: W0RJJ5_9BACT (Short-chain dehydrogenase/reductase SDR n=1 Tax=Gemmatirosa kalamazoonesis TaxID=861299 RepID=W0RJJ5_9BACT)

HSP 1 Score: 94.0 bits (232), Expect = 1.640e-20
Identity = 68/142 (47.89%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKI--RESDPEYEG-MDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRL 139
            MV  GRG V+NV S  G     +ASAY TSK AL RL++ AA      GV VF I PG V T MT+EL S    R   P Y    DE      +DAA+L +RLAAGDAD L+GR++   DDLDAL+  A+ I  ++   LRL
Sbjct:  130 MVPRGRGRVVNVSSRAGNAAIPFASAYVTSKTALTRLTEVAAAEARPYGVFVFAIEPGTVRTAMTEELMSSDAGRAWLPWYRATFDEGRDASPDDAARLVVRLAAGDADPLAGRLVSRADDLDALVADAERIAREERLVLRL 271          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: A0A641ARS4_9ACTN (SDR family oxidoreductase n=1 Tax=Aeromicrobium fastidiosum TaxID=52699 RepID=A0A641ARS4_9ACTN)

HSP 1 Score: 92.0 bits (227), Expect = 1.170e-19
Identity = 57/146 (39.04%), Postives = 81/146 (55.48%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKIRES----DPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRLTMA 142
            MV  G GC++NVGSY G  P  + SAYS +KAA+  +++  A  + + GV+ FT+ P  V T  T  LDS   +      PE   + E    PA       +RL  G AD +SGR++ V  DL+A+ ER++EI   + Y LR+T A
Sbjct:  135 MVERGSGCIVNVGSYFGYQPKAYRSAYSAAKAAVHTMTEVLATEVAEHGVTAFTLDPAMVKT--TLLLDSAASDQAARWTPEATDLPEDGYTPAAAVGDFVVRLVLGAADGMSGRVVRVHSDLEAMDERSEEIRRDEHYVLRMTKA 278          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: B5JNB0_9BACT (Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Verrucomicrobiae bacterium DG1235 TaxID=382464 RepID=B5JNB0_9BACT)

HSP 1 Score: 91.7 bits (226), Expect = 1.410e-19
Identity = 58/139 (41.73%), Postives = 77/139 (55.40%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRL 139
            M+    G +IN+GSY  + P      Y+ SKAAL+RLSD  A S    G+SVFT+SPG V TDMT+++    ++  PE      AW    +D  KL   L++G    LSGR IHV DDL  L +  D I  ++ Y L L
Sbjct:  143 MIARQSGTIINMGSYASIRPIEGNPGYAASKAALVRLSDSLAVSTKPHGISVFTVSPGLVLTDMTRDVPI-FKDLPPE------AWSS-IDDICKLVANLSSGSYSALSGRFIHVNDDLQQLAQNLDRIKSENLYTLHL 273          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: A0A538DBS8_9ACTN (SDR family oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DBS8_9ACTN)

HSP 1 Score: 90.1 bits (222), Expect = 4.220e-19
Identity = 58/140 (41.43%), Postives = 79/140 (56.43%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKI--RESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALR 138
            M+  G G ++ V SY   +P  ++S Y++ KAAL+R  D  A  + D GV VF ++PGFV T +  E+      R   PE     +A     E   +L + LA+G AD LSGR +HV DDLD LI RA++I   D YALR
Sbjct:  126 MIAGGSGRIVAVSSYAANDPRPYSSGYASGKAALLRFVDSVAAEVADHGVYVFAVTPGFVRTRLVDEVAQSTAGRRWLPELAERQDA--LEPERVGRLVVELASGRADALSGRFLHVLDDLDDLIARAEQISRDDRYALR 263          
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Match: UPI001904D122 (SDR family oxidoreductase n=1 Tax=Pelagicoccus mobilis TaxID=415221 RepID=UPI001904D122)

HSP 1 Score: 89.7 bits (221), Expect = 6.100e-19
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 0
Query:    1 MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGVSVFTISPGFVWTDMTKELDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRLAAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRL 139
            M+    G VIN+GSY  V+P   A+ YS SKAAL R +D    +L  S V +FT+SPG V TDMTK+         P  + + + +  P E  ++L  +LA G    L GR IHV+DD+D L   AD I   + Y+L L
Sbjct:  130 MLRRNAGIVINMGSYSSVHPFPGAATYSASKAALARYTDSVQATLKGSSVQIFTVSPGLVETDMTKDA--------PFVKDIPKEFWSPIEAISRLVEKLAGGKYASLKGRFIHVKDDIDELAREADRINSDNLYSLTL 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70227.18073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5B0WXY5_9GAMM1.070e-4457.55SDR family oxidoreductase n=1 Tax=Pseudohalioglobu... [more]
A0A1Q9NBW7_9ARCH2.590e-2443.883-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
A0A2W6DLA1_9PSEU1.550e-2145.89NAD(P)-dependent oxidoreductase n=1 Tax=Pseudonoca... [more]
A0A3D4WUN6_9ACTN1.380e-2042.36Uncharacterized protein n=1 Tax=Micromonosporaceae... [more]
A0A6B2LZV0_9BACT1.500e-2046.43SDR family oxidoreductase n=1 Tax=Oceanipulchritud... [more]
W0RJJ5_9BACT1.640e-2047.89Short-chain dehydrogenase/reductase SDR n=1 Tax=Ge... [more]
A0A641ARS4_9ACTN1.170e-1939.04SDR family oxidoreductase n=1 Tax=Aeromicrobium fa... [more]
B5JNB0_9BACT1.410e-1941.73Oxidoreductase, short chain dehydrogenase/reductas... [more]
A0A538DBS8_9ACTN4.220e-1941.43SDR family oxidoreductase n=1 Tax=Actinomycetia ba... [more]
UPI001904D1226.100e-1941.01SDR family oxidoreductase n=1 Tax=Pelagicoccus mob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 48..65
score: 34.8
coord: 1..17
score: 31.26
coord: 27..46
score: 30.84
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 1..71
e-value: 3.5E-15
score: 56.0
NoneNo IPR availableGENE3D3.40.50.720coord: 1..140
e-value: 1.2E-20
score: 75.7
NoneNo IPR availablePANTHERPTHR42760:SF40coord: 1..117
NoneNo IPR availablePANTHERPTHR42760FAMILY NOT NAMEDcoord: 1..117
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 14..42
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70227contigEcto-sp13_S_contig70227:17..457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70227.18073.1mRNA_Ecto-sp13_S_contig70227.18073.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70227 2..457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70227.18073.1 ID=prot_Ecto-sp13_S_contig70227.18073.1|Name=mRNA_Ecto-sp13_S_contig70227.18073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MVTAGRGCVINVGSYVGVNPTGWASAYSTSKAALMRLSDCAADSLDDSGV
SVFTISPGFVWTDMTKELDSKIRESDPEYEGMDEAWIFPAEDAAKLCLRL
AAGDADRLSGRMIHVRDDLDALIERADEIIDQDGYALRLTMALDDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR036291NAD(P)-bd_dom_sf