prot_Ecto-sp13_S_contig702.18068.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig702.18068.1
Unique Nameprot_Ecto-sp13_S_contig702.18068.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length65
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig702.18068.1 vs. uniprot
Match: A0A1X7TFE2_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFE2_AMPQE)

HSP 1 Score: 48.1 bits (113), Expect = 9.310e-5
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 0 
Query:    1 MESWLMAGLPISRLDDVRDLFRGLGVDMVGSSHLKQYLEFLQDEEKRRLSEVIGDEYYSVSFDGS 65
            +E +L AG+PIS+LD++R+L     + +  SSH+  Y+  L  +EK+ + + I  +  SV FDG+
Sbjct:  167 VEQFLYAGIPISKLDNLRNLLEENALRLTHSSHMMDYIPPLLKKEKQAVRQAIEGKNVSVCFDGT 231
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig702.18068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X7TFE2_AMPQE9.310e-536.92Dimer_Tnp_hAT domain-containing protein n=1 Tax=Am... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig702contigEcto-sp13_S_contig702:22073..22267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig702.18068.1mRNA_Ecto-sp13_S_contig702.18068.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig702 22070..22267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig702.18068.1 ID=prot_Ecto-sp13_S_contig702.18068.1|Name=mRNA_Ecto-sp13_S_contig702.18068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
MESWLMAGLPISRLDDVRDLFRGLGVDMVGSSHLKQYLEFLQDEEKRRLS
EVIGDEYYSVSFDGS
back to top