prot_Ecto-sp13_S_contig7019.18066.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7019.18066.1
Unique Nameprot_Ecto-sp13_S_contig7019.18066.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length312
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7019.18066.1 vs. uniprot
Match: A0A6H5KJ15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ15_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 1.280e-102
Identity = 269/307 (87.62%), Postives = 273/307 (88.93%), Query Frame = 0 
Query:   20 MADSPPVTRKRGRHNDGDRAVTRDRR--------------NAGSDWRESLRNSRQEEMEKAVADKRKKLVRAIPTTIPGVSAVVRGDARSDIREIEALVDMQVLQPEEMAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAEKEDEQLEAERDAWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRGLEAEVMKRAGLEGKFDMTK 312
            M DSPPVTRKRGRHNDGDRAVTRDRR              NAGSDWRESLRN+RQEEMEKA+ADKRKKLVRAIPT IPGVSAVVRGDARSDIREIEALVDMQVLQPEE+APGAVQATPRPPMPKANQLEPKRARMARWKKDPSE+EKDMAKQREALKKAEKEDEQLEAER AWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXX  RVRG EAEVMKRAGLEGKFDMTK
Sbjct:    1 MVDSPPVTRKRGRHNDGDRAVTRDRRLVSIVRTIIIGVLWNAGSDWRESLRNARQEEMEKAIADKRKKLVRAIPTNIPGVSAVVRGDARSDIREIEALVDMQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEIEKDMAKQREALKKAEKEDEQLEAERHAWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGTGKAVNDGRYRXXXXXXXXXE-RVRGFEAEVMKRAGLEGKFDMTK 306
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BLAST of mRNA_Ecto-sp13_S_contig7019.18066.1 vs. uniprot
Match: D7G695_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G695_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 3.510e-102
Identity = 254/286 (88.81%), Postives = 257/286 (89.86%), Query Frame = 0 
Query:   27 TRKRGRHNDGDRAVTRDRRNAGSDWRESLRNSRQEEMEKAVADKRKKLVRAIPTTIPGVSAVVRGDARSDIREIEALVDMQVLQPEEMAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAEKEDEQLEAERDAWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRGLEAEVMKRAGLEGKFDMTK 312
            +R RGRHNDGDRAVTRDRRNAGSDWRESLRNSRQEEMEKAVADKRKKLVRAIPTTIPGVSAVVRGDARSDIREIEALVDMQVLQPEE+APGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAE+EDEQLEAERDAWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXX         RVRGLE EVMKRAGLEGKFDMTK
Sbjct:   39 SRARGRHNDGDRAVTRDRRNAGSDWRESLRNSRQEEMEKAVADKRKKLVRAIPTTIPGVSAVVRGDARSDIREIEALVDMQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAEEEDEQLEAERDAWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSTGKAVDNGRFRTGGEXXXXXE--------RVRGLEVEVMKRAGLEGKFDMTK 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7019.18066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ15_9PHAE1.280e-10287.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G695_ECTSI3.510e-10288.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7019contigEcto-sp13_S_contig7019:2091..7275 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7019.18066.1mRNA_Ecto-sp13_S_contig7019.18066.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7019 2091..7277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7019.18066.1 ID=prot_Ecto-sp13_S_contig7019.18066.1|Name=mRNA_Ecto-sp13_S_contig7019.18066.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
STRSRETRCSSRGPKHSGSMADSPPVTRKRGRHNDGDRAVTRDRRNAGSD
WRESLRNSRQEEMEKAVADKRKKLVRAIPTTIPGVSAVVRGDARSDIREI
EALVDMQVLQPEEMAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEM
EKDMAKQREALKKAEKEDEQLEAERDAWERWYLVLRAHLTAGRRPTATWS
PAAAAAAAAAAAPAAAAASSTTTSNESHVSGGDSDSSGDENVAAAGGAGG
GGGGSSNSSTAGGGSGDGTGKAVDDGRYRRGGEEEEEEERVRGLEAEVMK
RAGLEGKFDMTK
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