prot_Ecto-sp13_S_contig7006.18055.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7006.18055.1
Unique Nameprot_Ecto-sp13_S_contig7006.18055.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length247
Homology
BLAST of mRNA_Ecto-sp13_S_contig7006.18055.1 vs. uniprot
Match: A0A6H5JXH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH9_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 3.420e-136
Identity = 226/247 (91.50%), Postives = 229/247 (92.71%), Query Frame = 0
Query:    1 MLHLGLCFRGTVPLLACLCAACTAFVPVPTRFPSRGQQAASSARPSTTIDGPGSPTQQATMPTAGTRRRPTSVSCRGEGAGGEGVEVAVDSXXXXXXXXXXXXXX-EVDPFRPTRASMSPLVINALVSVLFRPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG 246
            MLHLGL FRGTVPLLACLC ACTAF+PVPTRFPSRGQQ ASSARPSTTI GPGSPTQQAT PTAGTRRRP SV C GEGAGGE        XXXXXXXXXXXXXX E+DPFRPTRASMSPLVINALVSVLFRPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMS+NVENDPLAQMNQAECLLALYILHKENAG AAVDFLDAERLDVLQG
Sbjct:    1 MLHLGLFFRGTVPLLACLCVACTAFIPVPTRFPSRGQQVASSARPSTTIAGPGSPTQQATTPTAGTRRRPISVPCCGEGAGGEXXXXXXXXXXXXXXXXXXXXXXAEMDPFRPTRASMSPLVINALVSVLFRPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSKNVENDPLAQMNQAECLLALYILHKENAGVAAVDFLDAERLDVLQG 247          
BLAST of mRNA_Ecto-sp13_S_contig7006.18055.1 vs. uniprot
Match: D7FRB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB2_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 4.220e-81
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0
Query:  117 MSPLVINALVSVLFRPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG 246
            MSPLVINALVSVLF+PDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVL G
Sbjct:    1 MSPLVINALVSVLFKPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLAG 130          
BLAST of mRNA_Ecto-sp13_S_contig7006.18055.1 vs. uniprot
Match: A0A835ZBX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX3_9STRA)

HSP 1 Score: 137 bits (344), Expect = 8.510e-37
Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 0
Query:  108 DPFRPTRASMSPLVINALVSVLFRPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG 246
            DPFRP +AS+ PLVINAL  VLF+ D  A  A +A L+ R D   T EE+  V SRV GV     ELRF LA+AV R   IAKYGM  DYG+SE++E++PLAQ+N AECLLALY+LH+E  G     F+DAE+LDVL+G
Sbjct:   42 DPFRPAKASIDPLVINALQRVLFK-DEPADAAVSALLQSRDD-ALTPEEDALVRSRVHGVVHSAQELRFTLASAVSRHAFIAKYGMQGDYGVSEDLESNPLAQLNHAECLLALYMLHREGRGEEPA-FVDAEKLDVLRG 177          
BLAST of mRNA_Ecto-sp13_S_contig7006.18055.1 vs. uniprot
Match: A0A4D9CRF9_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRF9_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.280e-10
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = 0
Query:  114 RASMSPLVINALVSVLFRPDTEATGAAAAALER----------RSDWE---FTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAK-YG-MFSDYGMSENVENDPLAQMNQAECLLALYILHKENAG-GAA--VDFLDAERLDVL 244
            RA++ P+VIN LV++L      +  +  A  ER          R+D      T EE R + +RV GV      L F+L  AV ++  + + +G   +D+G+  +   DP+  +N+AECLLALY+L +E  G G A  VDFLD++RL+VL
Sbjct:  140 RAAVDPVVINILVTILSSSAASSPPSTLADAERIANKAIRKRMRTDAPESALTAEERRLIYARVYGVEVLRARLSFLLEHAVAQSSLVGRRFGPTLADFGLPMDASGDPMLVVNRAECLLALYMLTEEVDGEGRAPRVDFLDSDRLEVL 288          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7006.18055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JXH9_9PHAE3.420e-13691.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRB2_ECTSI4.220e-8198.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBX3_9STRA8.510e-3757.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CRF9_9STRA5.280e-1036.91SAM_MT_RSMB_NOP domain-containing protein n=3 Tax=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..24
score: 0.565

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7006contigEcto-sp13_S_contig7006:2371..4424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7006.18055.1mRNA_Ecto-sp13_S_contig7006.18055.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7006 1306..4424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7006.18055.1 ID=prot_Ecto-sp13_S_contig7006.18055.1|Name=mRNA_Ecto-sp13_S_contig7006.18055.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
MLHLGLCFRGTVPLLACLCAACTAFVPVPTRFPSRGQQAASSARPSTTID
GPGSPTQQATMPTAGTRRRPTSVSCRGEGAGGEGVEVAVDSAAATGAAAA
AAAAAEVDPFRPTRASMSPLVINALVSVLFRPDTEATGAAAAALERRSDW
EFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMS
ENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG*
back to top