prot_Ecto-sp13_S_contig7004.18053.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7004.18053.1
Unique Nameprot_Ecto-sp13_S_contig7004.18053.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length427
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7004.18053.1 vs. uniprot
Match: D7FMA6_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA6_ECTSI)

HSP 1 Score: 681 bits (1758), Expect = 6.070e-245
Identity = 372/416 (89.42%), Postives = 379/416 (91.11%), Query Frame = 0 
Query:   13 MASSAESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDTPGPGQYYNSAGAGASAYRPAGSGVVAWTGIDTFADSEWSRLVPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSVEKKNALLVVQFIDGQR--RSPQSPEPAHEDASPLSHSPATHNEDGTPLRFSSADVGGGGGEFAVGSGVARAAVRKRTPLHFASERGELSLVDRLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXXLLQGDENEAQPAGGENAPRGAAPKRPRQVPADPNVQDDKGRTPMYLACHRGHERAVRALLKAGACPDLVDIRGKPAKEVAGAQKIYQLLQFKADVSLVKANIAALEGRQRNEERQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKREAYAAAAKAQ 426
            MAS AESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDTPGPGQYYN AGAGASA RPAG GVVAWTGIDTFADSEWSR VPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSVEKKNALLV QF+DGQR  RSP+SPEPA EDASP S+SPATHNEDGTPL F+SADVGGGGGEFAVGSG ARAAVRKRTPLHFASERGELSLVDRLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXXLLQGDENE QPAGGENAPRGAAPKRPRQ+PADPNVQDDKGRTP+YLACHRGHERAVRALLKAGACPDLVDIRGKPA+EVAGAQKIYQLLQFKADVSLVKANIAALEGRQRNEERQRK          XXXXX              NKREAYAAAAKAQ
Sbjct:    1 MASGAESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDTPGPGQYYNPAGAGASACRPAGPGVVAWTGIDTFADSEWSRPVPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSVEKKNALLVAQFLDGQRQRRSPRSPEPAREDASPSSNSPATHNEDGTPLSFASADVGGGGGEFAVGSGAARAAVRKRTPLHFASERGELSLVDRLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXXLLQGDENEVQPAGGENAPRGAAPKRPRQLPADPNVQDDKGRTPLYLACHRGHERAVRALLKAGACPDLVDIRGKPAQEVAGAQKIYQLLQFKADVSLVKANIAALEGRQRNEERQRKKVAQAAALKEXXXXXAEELRLKAAVSALENKREAYAAAAKAQ 416
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7004.18053.1 vs. uniprot
Match: A0A6H5KH12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH12_9PHAE)

HSP 1 Score: 681 bits (1756), Expect = 1.060e-242
Identity = 370/429 (86.25%), Postives = 376/429 (87.65%), Query Frame = 0 
Query:    1 MRTAPSCSFGGGMASSAESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDTPGPGQYYNSAGAGASAYRPAGSGVVAWTGIDTFADSEWSRLVPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSVEKKNALLVVQFIDGQR--RSPQSPEPAHEDASPLSHSPATHNEDGTPLRFSSADVGGGGGEFAVGSGVARAAVRKRTPLHFASERGELSLVDRLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXXLLQGD-ENEAQPAGGENAPRGAAPKRPRQVPADPNVQDDKGRTPMYLACHRGHERAVRALLKAGACPDLVDIRGKPAKEVAGAQKIYQLLQFKADVSLVKANIAALEGRQRNEERQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKREAYAAAAKAQ 426
            MRTAPSC FGGGMAS  ESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDT GPGQYYN AGAGASA RPAGSGVVAWTGIDTFADSEWS+ VPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHS+EKKNALLVVQF+DGQR  RSPQSPEP HEDASP S SPATHNEDGTPL FSSA VGGGGGE AVGSG ARAAVRKRTPLHFASERGELSLVDRLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXX  QGD ENE QPAGGE APRGAAP RPRQVPADPNVQDDKGRTP+YLACHRGHERAVRALLKAGACPDLVDIRGKPA+EVAGAQ IYQLLQFKADVSLVKANIAALEGRQRNEERQRK                             NKREAYAAAA A+
Sbjct:  108 MRTAPSCFFGGGMASGDESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFSPASRFPVGQKVFDTLGPGQYYNPAGAGASACRPAGSGVVAWTGIDTFADSEWSKSVPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSIEKKNALLVVQFLDGQRHRRSPQSPEPVHEDASPSSRSPATHNEDGTPLSFSSAGVGGGGGELAVGSGAARAAVRKRTPLHFASERGELSLVDRLCFQGDDRNAVDERGFXXXXXXXXXXXXXXXXXXXQGDDENEVQPAGGETAPRGAAPTRPRQVPADPNVQDDKGRTPLYLACHRGHERAVRALLKAGACPDLVDIRGKPAQEVAGAQNIYQLLQFKADVSLVKANIAALEGRQRNEERQRKKVAQAAALKELAELKEEELRLKAAVSALENKREAYAAAANAR 536
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7004.18053.1 vs. uniprot
Match: A0A836CHI4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHI4_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.310e-5
Identity = 36/105 (34.29%), Postives = 49/105 (46.67%), Query Frame = 0 
Query:   45 PTTLFSPASRF--PVGQKVFDTPGPGQYYNSAGAGASAYRPAGSGVVAWTGIDTFADSEWSRLVPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSVEKKN 147
            P  +F+   RF     Q   D PGPG Y  +A +G       G+ V     +            PP   + W  +G GCS+ EH+ YGACLDG+C  RH+ E+ N
Sbjct:  468 PCVVFNEVDRFRSTTAQDYEDDPGPGTYTVTAASG-------GTSVKLRPHLLRQQQQNDDGNEPP---QEWGTYGYGCSLDEHVLYGACLDGKCLQRHAAERLN 562
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7004.18053.1 vs. uniprot
Match: V6TWT8_GIAIN (Ankyrin repeat protein n=3 Tax=Giardia intestinalis TaxID=5741 RepID=V6TWT8_GIAIN)

HSP 1 Score: 54.7 bits (130), Expect = 9.810e-5
Identity = 22/54 (40.74%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:  299 DPNVQDDKGRTPMYLACHRGHERAVRALLKAGACPDLVDIRGKPAKEVAGAQKI 352
            D ++ DD+GRTP+++AC +GH     AL+ +GA  D++DI GKP +  A   ++
Sbjct:  151 DLDITDDQGRTPLHIACIKGHPDIAHALIDSGASTDIIDIDGKPPRYYADTNRL 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7004.18053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMA6_ECTSI6.070e-24589.42Ankyrin domain protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KH12_9PHAE1.060e-24286.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CHI4_9STRA1.310e-534.29Reverse transcriptase domain-containing protein n=... [more]
V6TWT8_GIAIN9.810e-540.74Ankyrin repeat protein n=3 Tax=Giardia intestinali... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 369..418
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 298..370
coord: 214..270
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 215..244
e-value: 1.5
score: 17.9
coord: 248..277
e-value: 0.48
score: 19.5
coord: 306..335
e-value: 8.2E-4
score: 28.7
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 307..337
e-value: 5.4E-5
score: 23.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 248..270
score: 9.778
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 306..338
score: 11.541
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 215..247
score: 10.526
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 215..271
e-value: 6.8E-8
score: 33.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 215..338
score: 21.402
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 122..410
e-value: 1.1E-29
score: 105.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 214..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7004contigEcto-sp13_S_contig7004:3702..6694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7004.18053.1mRNA_Ecto-sp13_S_contig7004.18053.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7004 3085..7816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7004.18053.1 ID=prot_Ecto-sp13_S_contig7004.18053.1|Name=mRNA_Ecto-sp13_S_contig7004.18053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=427bp
MRTAPSCSFGGGMASSAESAVPGASRDTPGAIYDPNIGGSSAPAPTTLFS
PASRFPVGQKVFDTPGPGQYYNSAGAGASAYRPAGSGVVAWTGIDTFADS
EWSRLVPPPRLRPWQGFGNGCSVQEHIDYGACLDGRCCSRHSVEKKNALL
VVQFIDGQRRSPQSPEPAHEDASPLSHSPATHNEDGTPLRFSSADVGGGG
GEFAVGSGVARAAVRKRTPLHFASERGELSLVDRLCFQGDDRNAVDERGF
TPLHDAAEHGNTRVVSRLLQGDENEAQPAGGENAPRGAAPKRPRQVPADP
NVQDDKGRTPMYLACHRGHERAVRALLKAGACPDLVDIRGKPAKEVAGAQ
KIYQLLQFKADVSLVKANIAALEGRQRNEERQRKKVAQAAALKELAELKA
EELRLKAAVSALENKREAYAAAAKAQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf