mRNA_Ecto-sp13_S_contig7004.18052.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7004.18052.1
Unique NamemRNA_Ecto-sp13_S_contig7004.18052.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI)

HSP 1 Score: 526 bits (1356), Expect = 2.430e-175
Identity = 284/287 (98.95%), Postives = 284/287 (98.95%), Query Frame = 1
Query:    1 TVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPGGXXXXXAAQVQ 861
            TVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPG XXXXX  QVQ
Sbjct:  950 TVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPGXXXXXXXXQVQ 1236          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: A0A835Z134_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z134_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 2.400e-141
Identity = 218/286 (76.22%), Postives = 245/286 (85.66%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPGGXXXXXAAQVQ 861
            VDGYNVCIFAYGQTGSGKT+TMFGAGG+GGG+N   G C   AGV PRAV ELFRVLKER+ QY Y+V ++MFELYRDGLRDL A+ G   KLVIKLAEHSGTGLVVVEGG+E  AN +K ++D I  GA+ R VSSTQMN+DSSRSHL+CS+V++STN RTGS +RGKLTLVDLAGSERVGKSGA+G+QLKEAQSINKSLSALGDVI ALT+G  HIPYRNH LTMMMSDSLGGN+KTLMFVCASPADYN SET+N+LQFAARCK VTNS+  GG     AAQ+Q
Sbjct:   96 VDGYNVCIFAYGQTGSGKTFTMFGAGGVGGGMNTATGECGPGAGVAPRAVGELFRVLKERQPQYTYNVTVTMFELYRDGLRDLQARHGDGAKLVIKLAEHSGTGLVVVEGGIETVANSVKDLVDTIAAGADRRAVSSTQMNADSSRSHLICSMVISSTNTRTGSVVRGKLTLVDLAGSERVGKSGAAGEQLKEAQSINKSLSALGDVIAALTSGSAHIPYRNHPLTMMMSDSLGGNAKTLMFVCASPADYNTSETINSLQFAARCKDVTNSSVAGG-----AAQLQ 376          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: A0A812VNR0_SYMMI (Kinesin-like protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VNR0_SYMMI)

HSP 1 Score: 310 bits (794), Expect = 1.830e-99
Identity = 171/275 (62.18%), Postives = 207/275 (75.27%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLA-KKGSHTK---LVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNS 816
            +DGYNVCIFAYGQTGSGKT+TM GA  IG  +  ++G  D  AG+TPRAV E+FR+L ER  Q  + V + MF+LYRDGL DLL  +KG   K   L I LAEHS TGLV  EG     A     ++ + ++GA  RT +STQMN++SSRSHL+CS+V+T TNRRTG++  GKLT+VDLAGSERV KSGA G+ LKEAQSINKSLSALGDVI +LT+   H+PYRNH LTM+MSDS+GGN+KTLMFV  SPADYN  E+ ++L FA RCK VTNS
Sbjct:  217 IDGYNVCIFAYGQTGSGKTFTMIGAADIGSCLR-DDGEFDELAGITPRAVSEIFRLLNERSAQCTFEVSVQMFQLYRDGLEDLLHNRKGGDAKGGNLKITLAEHSPTGLV--EGANSMTATSAAEVMKIFEIGANRRTTASTQMNAESSRSHLICSLVITLTNRRTGTTTTGKLTVVDLAGSERVDKSGAQGEMLKEAQSINKSLSALGDVIASLTSNSSHVPYRNHPLTMLMSDSIGGNAKTLMFVNCSPADYNVQESNSSLSFANRCKDVTNS 488          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: A0A7S2K2T0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2T0_9STRA)

HSP 1 Score: 323 bits (827), Expect = 6.210e-98
Identity = 177/273 (64.84%), Postives = 215/273 (78.75%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNAN-EGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKG-SHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGV-KHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTN 813
            VDG+NVCIFAYGQTGSGKTYTMFGAGG+    NA  +G  D  AG+ PRA  ELFRVLKE+E      V ++MFELY D LRDLL  +    TKL IKLAEH+ +G+V V+G +  EA+ +  ++++ + G+  RT SST+MN+DSSRSHL+ SIV +  N+RTG  ++GKLTLVDLAGSERVGKSGA+G+QLKEAQSINKSLSALGDVI ALT+G  KH+PYRN+ LTM+MSDS+GGN+KTLMFVC+SPADYN SET N+L FA RCK V N
Sbjct: 1037 VDGFNVCIFAYGQTGSGKTYTMFGAGGLV--QNAQPDGSMDPDAGLAPRAAAELFRVLKEKESSSNVQVTVTMFELYNDALRDLLVPEDREQTKLRIKLAEHTDSGMVEVDGAITEEASSVADLLELFKRGSLSRTTSSTKMNADSSRSHLITSIVTSVINKRTGRIVQGKLTLVDLAGSERVGKSGATGNQLKEAQSINKSLSALGDVICALTSGKNKHVPYRNNPLTMLMSDSIGGNAKTLMFVCSSPADYNRSETTNSLDFAKRCKDVRN 1307          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: B8CD61_THAPS (Kinesin motor protein-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD61_THAPS)

HSP 1 Score: 298 bits (762), Expect = 9.000e-97
Identity = 162/273 (59.34%), Postives = 198/273 (72.53%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKK--GSHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVK-HIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTN 813
            +DG+NVCIFAYGQTGSGKTYTMFG+              +   G+ PR   ELF  L+ERE  +   V ++M ELY D L DLL  K  G  + L I+LAEH+ +GLV VEG     A +   ++D+   GA+GR  SST+MN+DSSRSH++ ++V++  NRRTG  + GKLTL DLAGSERV KSGA+G QLKEAQSINKSLSALGDVIGALT+G + HIPYRNH LTM+MSDS+GGN+KTLMFVC SPADYN  ET N+L FA RC++VTN
Sbjct:   97 IDGFNVCIFAYGQTGSGKTYTMFGS----------NDRSERHQGLAPRVAHELFNKLQERESSHHIEVSVTMLELYTDKLGDLLTSKEEGYASDLKIRLAEHTSSGLVEVEGAKMERATNANELLDIFNRGAKGRASSSTKMNADSSRSHMIATVVLSLRNRRTGKVIHGKLTLTDLAGSERVAKSGAAGHQLKEAQSINKSLSALGDVIGALTSGGRQHIPYRNHPLTMLMSDSIGGNAKTLMFVCCSPADYNRKETANSLDFAKRCRNVTN 359          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: A0A7S3HTV9_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTV9_9STRA)

HSP 1 Score: 298 bits (762), Expect = 1.450e-96
Identity = 172/289 (59.52%), Postives = 208/289 (71.97%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLA-----KKGSHTK-------LVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNST--GPG 828
            +DGYNVCIFAYGQTG+GK++TM GA  I   ++ N G  D  AG+TPRAV ELFR+L ER  Q ++ V++ MF+LYRDGL DLL      KKG           L I LAEHS TGLV VEG     A     ++ +   G+  RT +STQMN++SSRSHL+CS+VV  TN+R+G    GKLTLVDLAGSERV KSGA+G+ LKEAQSINKSLSALGDVI ALTT  +H+PYRNH LTM+MSDS+GGN+KTLMFV  SPADYN  E+ ++L FA RCK +TN+   GPG
Sbjct:   60 LDGYNVCIFAYGQTGAGKSFTMIGAADIANCMSEN-GDFDDLAGITPRAVSELFRLLNERTAQIDFVVEVQMFQLYRDGLDDLLKEPIKRKKGXXXXXXXXXXXLKITLAEHSPTGLVYVEGAQTLAATTPGDVMKIFAKGSARRTTASTQMNAESSRSHLICSLVVKLTNKRSGKESIGKLTLVDLAGSERVDKSGAAGEVLKEAQSINKSLSALGDVISALTTNQQHVPYRNHPLTMLMSDSIGGNAKTLMFVNTSPADYNTPESNSSLAFANRCKDITNAVAAGPG 347          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: F0YJ50_AURAN (Kinesin-like protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ50_AURAN)

HSP 1 Score: 290 bits (743), Expect = 1.270e-94
Identity = 157/280 (56.07%), Postives = 209/280 (74.64%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLA---KKGSH-TKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPGG 831
            VDG+NVCIFAYGQ+GSGKT+TM GA  I   ++         AG+ PR+ +E+FR+L+ER     Y V+LSM+ELYRD LRDL A   +KG+    L +KLA+ S +GLV VEGGV R    +  ++  ++ G EGR+V+ T++N++SSRSHL+ ++V+ STN R+G  + GKLTLVDLAGSERV KSG +GD+LKEA  INKSLSA+GDVI AL++G KH+PYRNH LTM+MSDS+GG++KTLMFV ASPAD + SET+++L F +RCK V N++   G
Sbjct:   31 VDGFNVCIFAYGQSGSGKTFTMAGAASIREAIDVETWNLAPLAGIIPRSAVEVFRMLEERSALAAYEVELSMYELYRDSLRDLFAAPVRKGAKPVALNVKLAQFSDSGLVQVEGGVTRRVQSLPDLVAALEAGLEGRSVAHTELNAESSRSHLIVTLVLKSTNHRSGHVVCGKLTLVDLAGSERVEKSGVAGDKLKEAMCINKSLSAIGDVINALSSGQKHVPYRNHPLTMLMSDSIGGSAKTLMFVNASPADTHVSETVSSLTFGSRCKRVKNASNANG 310          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: A0A7S2B390_9STRA (Kinesin-like protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B390_9STRA)

HSP 1 Score: 298 bits (762), Expect = 4.140e-94
Identity = 166/291 (57.04%), Postives = 210/291 (72.16%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGG-IGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKG----SHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTGPGGXXXXXAAQVQ 861
            ++G NVCIFAYGQTGSGKT+TM G GG IG  ++++ G     AGVTPRA +ELF VL+ER+      V +SM+ELY D L DLL +          L +KLA+H+ +GLV V+ G    A+ ++ + D+++ G   R+  ST+MN++SSRSHL+ S V+ STNRR+G    GKLTLVDLAGSERV KSGA G +LKEAQSINKSLSA+GDV+GALT+G KHIPYRNH LT +MSDS+GG++KT+M VC SPADYNA E++NAL FA RCK+V N T         AAQVQ
Sbjct:  255 IEGTNVCIFAYGQTGSGKTFTMVGPGGAIGSNIDSSTGQPLDAAGVTPRAAVELFNVLQERDALCTAEVDVSMYELYCDALVDLLKEPSRPGQKEPDLKVKLAQHTESGLVEVQNGTICRASTLQELTDILEAGVRNRSTQSTKMNAESSRSHLVMSFVIRSTNRRSGVVTSGKLTLVDLAGSERVDKSGAEGQRLKEAQSINKSLSAIGDVVGALTSGTKHIPYRNHTLTTLMSDSIGGSAKTVMMVCCSPADYNAVESVNALSFAVRCKNVKNMTAAN--PAAAAAQVQ 543          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: A0A8J2SWW4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWW4_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.850e-91
Identity = 163/274 (59.49%), Postives = 204/274 (74.45%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGG-IGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKGSHTKLVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNSTG 822
            VDG+NVCIFAYGQ+GSGKTYTM G GG +   V+        +AGV PR+ +E+FRVL ER     Y V+LSM+ELYRD LRDLLA +     L +KLA+H+  GL  VEGGV R+A  ++ ++ ++  G E R V+ T++N++SSRSHLL SIV+TSTNRR+G   RGKL LVDLAGSERV KSG  GD+LKEA SINKSLSA+GDVI AL+   KH+PYRNH LTM+MSDS+GG +KTLM V ASP+  +ASET N+L F +RCK V +S+G
Sbjct:  722 VDGFNVCIFAYGQSGSGKTYTMAGGGGPVRDAVDLESWAVAASAGVIPRSCVEIFRVLDERAALNSYEVELSMYELYRDALRDLLADRKDKKPLSVKLAQHTRDGLAAVEGGVCRQAKSLEELVALLDKGLEQRAVAHTELNAESSRSHLLVSIVLTSTNRRSGKKTRGKLMLVDLAGSERVEKSGVQGDELKEAASINKSLSAIGDVIAALSQKSKHVPYRNHPLTMLMSDSIGGTAKTLMIVNASPSSEHASETANSLTFGSRCKRVKSSSG 995          
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA)

HSP 1 Score: 299 bits (765), Expect = 1.340e-90
Identity = 173/289 (59.86%), Postives = 208/289 (71.97%), Query Frame = 1
Query:    4 VDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRAVLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLA-----KKGSHTK-------LVIKLAEHSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHLLCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINKSLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPADYNASETLNALQFAARCKSVTNST--GPG 828
            VDGYNVCIFAYGQTG+GK++TM GA  I   ++ N G  D  AG+TPRAV ELFR+L ER  Q ++ V++ MF+LYRDGL DLL      KKG           L I LAEHS TGLV VEG     A     ++ +   G+  RT +STQMN++SSRSHL+CS+VV  TN+R+G    GKLTLVDLAGSERV KSGA+G+ LKEAQSINKSLSALGDVI ALTT  +H+PYRNH LTM+MSDS+GGN+KTLMFV  SPADYN  E+ ++L FA RCK +TN+   GPG
Sbjct:  713 VDGYNVCIFAYGQTGAGKSFTMIGAADIANCMSEN-GDFDDLAGITPRAVSELFRLLNERTAQIDFVVEVQMFQLYRDGLDDLLKEPIKRKKGXXXXXXXXXXXLKITLAEHSPTGLVYVEGAQTLAATTPGDVMKIFAKGSARRTTASTQMNAESSRSHLICSLVVKLTNKRSGKESIGKLTLVDLAGSERVDKSGAAGEVLKEAQSINKSLSALGDVISALTTNQQHVPYRNHPLTMLMSDSIGGNAKTLMFVNTSPADYNTPESNSSLAFANRCKDITNAVAAGPG 1000          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7004.18052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMA5_ECTSI2.430e-17598.95Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
A0A835Z134_9STRA2.400e-14176.22Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A812VNR0_SYMMI1.830e-9962.18Kinesin-like protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S2K2T0_9STRA6.210e-9864.84Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8CD61_THAPS9.000e-9759.34Kinesin motor protein-like protein (Fragment) n=1 ... [more]
A0A7S3HTV9_9STRA1.450e-9659.52Kinesin-like protein (Fragment) n=1 Tax=Spumella e... [more]
F0YJ50_AURAN1.270e-9456.07Kinesin-like protein (Fragment) n=1 Tax=Aureococcu... [more]
A0A7S2B390_9STRA4.140e-9457.04Kinesin-like protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2SWW4_9STRA2.850e-9159.49Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3HTU3_9STRA1.340e-9059.86Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7004contigEcto-sp13_S_contig7004:41..2591 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score531.9
Seed ortholog evalue1.8e-148
Seed eggNOG ortholog2880.D7FMA5
Model size864
KEGG koko:K10406
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.proteasome regulatory particle assembly
EggNOG OGsCOG0666@1,COG5059@1,KOG0239@2759,KOG4412@2759
Cds size861
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463961.8127007-CDS-Ecto-sp13_S_contig7004:40..821681463961.8127007-CDS-Ecto-sp13_S_contig7004:40..82Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7004 41..82 +
1681463961.8235142-CDS-Ecto-sp13_S_contig7004:667..8771681463961.8235142-CDS-Ecto-sp13_S_contig7004:667..877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7004 668..877 +
1681463961.8327248-CDS-Ecto-sp13_S_contig7004:1484..16161681463961.8327248-CDS-Ecto-sp13_S_contig7004:1484..1616Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7004 1485..1616 +
1681463961.8492785-CDS-Ecto-sp13_S_contig7004:2112..25891681463961.8492785-CDS-Ecto-sp13_S_contig7004:2112..2589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7004 2113..2589 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7004.18052.1prot_Ecto-sp13_S_contig7004.18052.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7004 41..2589 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7004.18052.1

>prot_Ecto-sp13_S_contig7004.18052.1 ID=prot_Ecto-sp13_S_contig7004.18052.1|Name=mRNA_Ecto-sp13_S_contig7004.18052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
TVDGYNVCIFAYGQTGSGKTYTMFGAGGIGGGVNANEGVCDGTAGVTPRA
VLELFRVLKEREGQYEYSVKLSMFELYRDGLRDLLAKKGSHTKLVIKLAE
HSGTGLVVVEGGVEREANDIKTMIDVIQLGAEGRTVSSTQMNSDSSRSHL
LCSIVVTSTNRRTGSSLRGKLTLVDLAGSERVGKSGASGDQLKEAQSINK
SLSALGDVIGALTTGVKHIPYRNHALTMMMSDSLGGNSKTLMFVCASPAD
YNASETLNALQFAARCKSVTNSTGPGGGGAAAAAQVQ
back to top

mRNA from alignment at Ecto-sp13_S_contig7004:41..2591+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7004.18052.1 ID=mRNA_Ecto-sp13_S_contig7004.18052.1|Name=mRNA_Ecto-sp13_S_contig7004.18052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2551bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7004:41..2591+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACTGTCGACGGCTACAACGTCTGCATCTTCGCGTACGGCCAGGTATGCAT GCAGAATAGCTGACAGCAGCGTGGAGAGGAAGATCGTGAATGGAATCCTT GGAGAAGAGACCACATGGGGAATATGTTCGACATACGGGTACATAGGCGC AGTACGATTAGTCTGTCTGTGGTCGAGGAGTACTGACCGACAACAAATTA CCAGCACGTGGCGAAACTTTCTGCGGAATGTCGGGCGAGCATGCCGGTGT ACGGGTAGGCGATGTTCAAACAAGTTCAACGAATAGCTGGGCGCGCGAAC CAGTGTGACGATTTGATGTACGTGATCCTCTGTGGTAAAAATTGGGTCAT TCTGGCGGCGTATGTGTCCCCTCACTCACAGACGCAAAAGTCTCAAGTGT AGCAGACCACAGTATCCCTCCTACTTCGGCGACGCAAGGCGTCAAAGTCT CTGTCGGTCTACAGTCTGCGGTTCTACTCTCCACAGCCACGCGGAAGAAA CGGAGACAAGAAAGAAACCGAACCTGCAGAGCAGATTGTACCTACCGCCG CCTGATGCTGCGGTTTCGATGTCTTCGTGGTTGCTGTCGATTGATGCCTT TCAACGAAAATTCCGTTCACACGACAGACCGGGTCCGGAAAGACGTACAC CATGTTCGGCGCGGGCGGGATCGGCGGCGGGGTTAACGCCAACGAAGGGG TGTGCGACGGGACTGCGGGGGTGACGCCTCGCGCGGTGTTGGAGCTCTTC CGCGTGCTCAAGGAAAGGGAGGGGCAGTATGAGTACAGCGTCAAGCTGTC CATGTTCGAGCTGTACCGAGACGGTCTGCGGGATCTGGTAAGTGCCGCTC GTGTCTGACTGTTTGGCACCGCCAACTGTCGGTTTGCTGCTTGAAAAATA GGCGGTGTTTCCAGTTTGTCCAAGAGAGTGGGCCGTCTTTGTAGATGGTA GAGCTTGCTGCCTTGTCTCGGGTCTCCGCCTAATCTTGTTTCGGTACCAA CATCCGAGCTGTTTGACAACACTCGATCTGGTGGGCGGACATCCTCCTGC GTTGTACCTTATGTGGGCATACAGTCGAGGATCGCACATCGGTCTCTATT TGACTAAGACAACATGCTGAGGCAAAATTGATCGGCGTTTCGCGCTTCCG AAAAAATCATCCTCGTGTCAAAACCGTGTCAACAACATGAAGCACGATTT GAGGAATACCCATTGGACGTCATCTATCTTCCACGTTTGTTCTTTCGGCG GTGAATATACGCTCCTATCATAATTCTTCTGAGAGTACAACTGTCCGAGA AACGAAACATGGTGATAGAGTGTTCCTTCTGTATTATATATATATCATCA CCGTTGGGTAGCCCATTGGTGTTCGACACCCTCTGTTCTTCTAATTACCC GGACGCCCGAACACTGACATATATTCCGTTTGCGGCACCCGTAGCTCGCC AAAAAGGGAAGCCACACGAAGCTGGTCATCAAGCTGGCCGAACATAGCGG CACGGGTCTGGTCGTGGTTGAAGGGGGGGTTGAGAGAGAAGCAAACGACA TCAAGACGATGATCGACGTCATTCAGGTGAAGGACGAGGGACTCCTCGTA TCACACACAGTACCACCAATGAACACAGATCTTGAAAGAATATGTTTCCC TGATGCTTCGCGGTGTACTGCAGGGGTGGTCATAGCTGAGCCGGAGCAGA GAGAGAAGGGAAACACATTAATACCTAGAAGATATTTGCCCTGGGCGCAG GAACTTACGACACCCATGGGTAGCGGACTGCGCCAAGATTGCCTAGATGC CATCCGTCCCTCTCCCCGCCCACGTACCCTTTTACCGCCAGTCCGACCAA CCTCAAGTACCGGAACAGGAGACCTGTGAATCGAGGTCCCCAACACAATG TCTCTGACGCGGGTCTCTTCGTACACGTAAGGTCGCCGTAACGCTAGTGC CGCATGCTACCAACAGCACTTTGTCGTCGACATCCCTTCGTGACGCAACG AGACTGAATTACCTGGCGGACAAAACGCAGCCAACCCAATCCCTCCCCTC CCCTCCCATGTCTGACCCGCAGCTCGGGGCAGAAGGGCGCACGGTGTCCT CGACGCAGATGAACTCGGACAGCTCCCGGTCTCACCTCTTGTGCTCCATC GTGGTAACCTCTACCAACCGTCGAACGGGGTCTTCCCTCCGAGGAAAGCT CACGCTGGTCGATCTCGCGGGTTCAGAGCGGGTGGGAAAGTCCGGAGCCT CGGGGGATCAGCTCAAAGAGGCCCAGAGCATCAACAAGTCCCTCTCGGCG CTGGGTGACGTGATCGGGGCGCTGACGACGGGGGTCAAGCACATCCCCTA CCGCAACCACGCGCTGACCATGATGATGAGCGACTCCCTGGGCGGGAACA GCAAGACTCTCATGTTTGTCTGCGCGTCCCCCGCAGATTACAACGCCTCC GAGACTCTCAACGCCCTCCAGTTCGCCGCGCGGTGCAAAAGCGTTACTAA CTCTACCGGGCCCGGCGGCGGAGGCGCGGCGGCGGCAGCGCAGGTGCAGG C
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7004:41..2591+

>mRNA_Ecto-sp13_S_contig7004.18052.1 ID=mRNA_Ecto-sp13_S_contig7004.18052.1|Name=mRNA_Ecto-sp13_S_contig7004.18052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7004:41..2591+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACTGTCGACGGCTACAACGTCTGCATCTTCGCGTACGGCCAGACCGGGTC
CGGAAAGACGTACACCATGTTCGGCGCGGGCGGGATCGGCGGCGGGGTTA
ACGCCAACGAAGGGGTGTGCGACGGGACTGCGGGGGTGACGCCTCGCGCG
GTGTTGGAGCTCTTCCGCGTGCTCAAGGAAAGGGAGGGGCAGTATGAGTA
CAGCGTCAAGCTGTCCATGTTCGAGCTGTACCGAGACGGTCTGCGGGATC
TGCTCGCCAAAAAGGGAAGCCACACGAAGCTGGTCATCAAGCTGGCCGAA
CATAGCGGCACGGGTCTGGTCGTGGTTGAAGGGGGGGTTGAGAGAGAAGC
AAACGACATCAAGACGATGATCGACGTCATTCAGCTCGGGGCAGAAGGGC
GCACGGTGTCCTCGACGCAGATGAACTCGGACAGCTCCCGGTCTCACCTC
TTGTGCTCCATCGTGGTAACCTCTACCAACCGTCGAACGGGGTCTTCCCT
CCGAGGAAAGCTCACGCTGGTCGATCTCGCGGGTTCAGAGCGGGTGGGAA
AGTCCGGAGCCTCGGGGGATCAGCTCAAAGAGGCCCAGAGCATCAACAAG
TCCCTCTCGGCGCTGGGTGACGTGATCGGGGCGCTGACGACGGGGGTCAA
GCACATCCCCTACCGCAACCACGCGCTGACCATGATGATGAGCGACTCCC
TGGGCGGGAACAGCAAGACTCTCATGTTTGTCTGCGCGTCCCCCGCAGAT
TACAACGCCTCCGAGACTCTCAACGCCCTCCAGTTCGCCGCGCGGTGCAA
AAGCGTTACTAACTCTACCGGGCCCGGCGGCGGAGGCGCGGCGGCGGCAG
CGCAGGTGCAG
back to top