prot_Ecto-sp13_S_contig7003.18051.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7003.18051.1
Unique Nameprot_Ecto-sp13_S_contig7003.18051.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length412
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7003.18051.1 vs. uniprot
Match: D7FLH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH9_ECTSI)

HSP 1 Score: 541 bits (1395), Expect = 1.140e-186
Identity = 328/373 (87.94%), Postives = 339/373 (90.88%), Query Frame = 0 
Query:    1 MNGRDAVDCGRRTVVATLTRALLGSWEGSATMGRELFDQSVLKNPDRSGPVGLGLEVLLQCLVQDDEPFGQLDMAVEAEEDTAPSQASSSSEVTRDXXXXXXXXXXXXXXXXXXXAVATASFAALSPEDETRACVTIVGNYVRADPDTSGAFFRDVIPKVLLMGVGGGRRGQSSGSRRVPRRLAALLRSLVRSTRCRNSFNMERMIPHTVKEVKAWGDPSVVLLSSSDSXXXXXXXXXXK---DGSSLGDDVVMGGTATVDRTRSRTKGKGKKGGRGSSAGNDKLRRRGLVLACIDILGHTSSCMSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHGVQTVLLGVLSSLALDSVIAVRLSALAAIGE 370
            MNGRD VDCGRRTVVATLTRALL SWEGS T+GRELFDQSVLK PDRSGPVGLGLEVLLQCLVQDD  FGQL+MAVEAEEDTAPSQAS        XXXXXXXXXXXXXXXXXXXA ATASFAALSPEDETRACVTI+GNYVRADPDTSGAFFRDVIPKVLLMG+GGGRRGQS GSRRVPRRLAALLRSLVR+TRCRNSFNMERMI HTVKEVKAWGDPSVVLLS    XXXXXXXXXX    + SSLGDDVVMGGTATVDR R+R     KK GRGS+AGNDKLRRRGLVLACIDILGHTSSC+SLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHGVQTVLLGVLS+LALD V+AVRLSALAAIGE
Sbjct:    1 MNGRDTVDCGRRTVVATLTRALLRSWEGSTTVGRELFDQSVLKTPDRSGPVGLGLEVLLQCLVQDDGDFGQLEMAVEAEEDTAPSQASXXXXXXXXXXXXXXXXXXXXXXXXXXXADATASFAALSPEDETRACVTIIGNYVRADPDTSGAFFRDVIPKVLLMGMGGGRRGQSGGSRRVPRRLAALLRSLVRTTRCRNSFNMERMIVHTVKEVKAWGDPSVVLLSXXXXXXXXXXXXXXXXXXEVSSLGDDVVMGGTATVDRARARXXXXXKKDGRGSNAGNDKLRRRGLVLACIDILGHTSSCLSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHGVQTVLLGVLSALALDGVVAVRLSALAAIGE 373
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BLAST of mRNA_Ecto-sp13_S_contig7003.18051.1 vs. uniprot
Match: A0A6H5KPL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL7_9PHAE)

HSP 1 Score: 537 bits (1383), Expect = 4.910e-184
Identity = 345/477 (72.33%), Postives = 358/477 (75.05%), Query Frame = 0 
Query:    1 MNGRDAVDCGRRTVVATLTRALLGSWEGSATM----------------------------------------------GRELFDQSVLKNPDRSGPVGLGLEVLLQCLVQDDEPFGQLDMAVEAEEDTAPSQASSSSEVTRDXXXXXXXXXXXXXXXXXXXAVATASFAALSPEDETRACVTIVGNYVRADPDTSGAFFRDVIPKVLLMGVGGGRRGQSSGSRRVPRRLAALLRSLVRSTRCRNSFNMERMIPHTVKEVKAWGDPSVVLLSSSDSXXXXXXXXXXKDGSSLGDDVVMGGTATVDRTRSRTKGKGKKGGRGSSAGNDKLRRRGLVLACIDILGHTSSCMSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHGVQTVLLGVLSSLALDSVIAVRLSALAAIGE---------------------VRIEPLTFRLRFPGLLVGLRASGVLAPGEVPRRSPKGDLS 410
            MNGRD VDCGRRTVVATLTRALLGSWEGSATM                                              GRELFDQSVLKNPDRSGPVGLGLEVLLQCLVQDD  FGQ DMAVEA ED APSQASSSSE +R XXXXXXXXXXXXXXXXXXX VATASFAALSPEDETRACVTI+GNYVRADPDTSGAFFRDVIPKVLLMG+GGGR+GQS GSRR+P RLAALLRSLVRSTR RNSFNMERM+ HTVKEVKAWGDPSVVL      XXXXXXXXXX D SSLGDDVVMGG+ATVDR R+R KGKGKKGGR SSAGNDKLRRRGLVLAC DILGHTSSCMSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTH VQTVLLGVLSSLALD V++VRLSALAAIGE                      ++  L  RL      VG+ A G      V   SP  D S
Sbjct:   29 MNGRDTVDCGRRTVVATLTRALLGSWEGSATMQQNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSLPRTRVSRFQGRELFDQSVLKNPDRSGPVGLGLEVLLQCLVQDDGAFGQQDMAVEAGEDIAPSQASSSSEGSRXXXXXXXXXXXXXXXXXXXXXVATASFAALSPEDETRACVTIIGNYVRADPDTSGAFFRDVIPKVLLMGMGGGRQGQSGGSRRIPPRLAALLRSLVRSTRSRNSFNMERMVVHTVKEVKAWGDPSVVLXXXXXXXXXXXXXXXXXDVSSLGDDVVMGGSATVDRARARNKGKGKKGGRASSAGNDKLRRRGLVLACTDILGHTSSCMSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHDVQTVLLGVLSSLALDGVVSVRLSALAAIGEGCSSDCVPGVSLLLERCLDAAPKVRALALRLLVDEFRVGVGAVGASLARAVLSPSPSADRS 505
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7003.18051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLH9_ECTSI1.140e-18687.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPL7_9PHAE4.910e-18472.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7003contigEcto-sp13_S_contig7003:2195..7799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7003.18051.1mRNA_Ecto-sp13_S_contig7003.18051.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7003 2195..7799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7003.18051.1 ID=prot_Ecto-sp13_S_contig7003.18051.1|Name=mRNA_Ecto-sp13_S_contig7003.18051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=412bp
MNGRDAVDCGRRTVVATLTRALLGSWEGSATMGRELFDQSVLKNPDRSGP
VGLGLEVLLQCLVQDDEPFGQLDMAVEAEEDTAPSQASSSSEVTRDSDSD
AAPPPPSSRNRRRRTAVATASFAALSPEDETRACVTIVGNYVRADPDTSG
AFFRDVIPKVLLMGVGGGRRGQSSGSRRVPRRLAALLRSLVRSTRCRNSF
NMERMIPHTVKEVKAWGDPSVVLLSSSDSSDDDADDQDGKDGSSLGDDVV
MGGTATVDRTRSRTKGKGKKGGRGSSAGNDKLRRRGLVLACIDILGHTSS
CMSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHGVQTVLLGVLS
SLALDSVIAVRLSALAAIGEVRIEPLTFRLRFPGLLVGLRASGVLAPGEV
PRRSPKGDLSP*
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