prot_Ecto-sp13_S_contig10151.180.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10151.180.1
Unique Nameprot_Ecto-sp13_S_contig10151.180.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match: A0A6H5K5R8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R8_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 3.800e-122
Identity = 190/285 (66.67%), Postives = 201/285 (70.53%), Query Frame = 0
Query:    1 MFSTTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALLVGMNSGISGLLLPM----------------------------------------------------------------------------IARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 209
            MF+TTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAV C+GLTIRAG+FFGTDPAHYSSDMRECFYWDDI+L GAVLLFG APMSCLAIRISRV+DAFK+REELC VFIGCSCCVAVLWVIQVLVELE+  +TSA HVVVEVQALL+GMN G+SGLLLPM                                                                            IARNPEDEQFNCFLHILNHYLLPTSPDEIN+SSAMHKRIAPFRTR
Sbjct:    1 MFATTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVGCIGLTIRAGIFFGTDPAHYSSDMRECFYWDDIMLMGAVLLFGGAPMSCLAIRISRVHDAFKLREELCFVFIGCSCCVAVLWVIQVLVELELLSDTSALHVVVEVQALLIGMNIGLSGLLLPMVRAHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSGGEMAEQFGKFCRENLCMESWDFLVDVVRYERMAPSPIARNPEDEQFNCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTR 285          
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match: D8LQY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY9_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 8.540e-100
Identity = 147/202 (72.77%), Postives = 171/202 (84.65%), Query Frame = 0
Query:    8 VIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALLVGMNSGISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 209
            +IRA+RLV+AYNRKYRLKYA+FVKR  ALGFWAV  +GLT+RAG+FFGTDPAHYSSDMRECFYWDDI + G  L+FG AP+S L IRISRVNDAF++REELC   +GCS    +LWVIQVLVELE+WP+T A HVVVEV  LL+GMN+G  GLLLPM++ +PE EQFN FL+ILN YLLPTSPDEIN+SSAM K +A FRTR
Sbjct:    1 MIRAIRLVIAYNRKYRLKYAKFVKRKRALGFWAVISIGLTVRAGLFFGTDPAHYSSDMRECFYWDDIFVVGIGLIFGGAPVSLLVIRISRVNDAFQLREELCRTIMGCSGIAVILWVIQVLVELEVWPDTPALHVVVEVLILLLGMNAGYWGLLLPMMS-SPE-EQFNSFLYILNQYLLPTSPDEINISSAMSKHMATFRTR 200          
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match: A0A6H5KE83_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE83_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 6.880e-84
Identity = 178/443 (40.18%), Postives = 191/443 (43.12%), Query Frame = 0
Query:    1 MFSTTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYS------------------------------------------------------------------------------------------------------------------------------SDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALLVGMNSGISGLLLPMIA------------------------------------------------------------------------------------------------------------RNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 209
            MF+TTPYVIRAVRLVVAYNRK RLKYARFVKRN+ALGF AVAC+GLTIRAG+FFGTDPAHYS                                                                                                                              SDMRECFYWDDIIL G ++L    PMSCLAIRISRVNDAFKIREELC VFIGCSCC AVLWVIQVLVEL++  +TSA HVVV+VQALL+GMN GISGLLLPM+                                                                                                              NPEDEQ  CFLHILNHYLLPTSPDEIN+SSAMHKRIAPFRTR
Sbjct:    1 MFATTPYVIRAVRLVVAYNRKCRLKYARFVKRNHALGFGAVACIGLTIRAGIFFGTDPAHYSRGQPNTQLEACQSGPLLQRRTRLQNTCRRRSHASIGVSDMRECFYWDVIILVGAILLLRGPPMSCLAIRISRAAGEGWQPLLLPPREKEKTKRRTRSNNCKPSCWRCTFPLISFISRLNCSYSLLCSDMRECFYWDDIILVGVMILSSGPPMSCLAIRISRVNDAFKIREELCFVFIGCSCCAAVLWVIQVLVELDLLSDTSALHVVVQVQALLIGMNIGISGLLLPMVRTHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSVGEMAEQFGKFCRENLCMESWDLLVDVVRYERMVPSPSNIFCRVGFDTRWSCLWNFSHPNGLTWFVRFADRENPEDEQLKCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTR 443          
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match: D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 6.710e-31
Identity = 85/205 (41.46%), Postives = 109/205 (53.17%), Query Frame = 0
Query:    6 PYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVEL-EIWPNTSAFHVVVEVQALLVGMNSGISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 209
            PY IRAVRLV+AYNRKYRLKYA+FVKR +A G   +  + LTIRAG+FFG DPAHYSS           +L                  +  V + F ++    C          VL +     EL + +      ++ +E    LV +      +   ++A +PEDEQFN FL ILN YLLPTSPDEIN+SS+M  RI  F TR
Sbjct:    2 PYFIRAVRLVIAYNRKYRLKYAKFVKRKHATGVLVLTFIVLTIRAGLFFGDDPAHYSS-----------LLLPMARAHRGGVQEWFRATVVPVEEVFTVQASDEC---------GVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVR-YERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTR 185          
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match: D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 3.750e-11
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0
Query:  164 MIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 209
            +IA +PEDEQFN FL ILN YLLPTSPDEIN+SS+M  RI  F TR
Sbjct:   77 LIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTR 122          
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match: A0A6H5L0L8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L8_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.890e-6
Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 0
Query:  171 DEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 209
            D+QF+ FL +LN YLLPTSPDE+N+SS M KR+A F+TR
Sbjct:  326 DDQFDEFLILLNQYLLPTSPDEVNISSKMSKRMASFKTR 364          
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match: D7FYH4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH4_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 5.360e-6
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 0
Query:  157 ISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 209
            +   L  M+     DEQF  F  I + YLL TSPDE+N+SSA  K +A FRTR
Sbjct:   38 VDATLYEMMDATDADEQFMTFTMISDRYLLATSPDEVNISSATSKHVAAFRTR 90          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5K5R8_9PHAE3.800e-12266.67RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQY9_ECTSI8.540e-10072.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE83_9PHAE6.880e-8440.18RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQX1_ECTSI6.710e-3141.46RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQW8_ECTSI3.750e-1171.74RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L0L8_9PHAE1.890e-666.67RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYH4_ECTSI5.360e-649.06RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..162
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 163..209
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 35..54
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10151contigEcto-sp13_S_contig10151:3148..5618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10151.180.1mRNA_Ecto-sp13_S_contig10151.180.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10151 3148..5618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10151.180.1 ID=prot_Ecto-sp13_S_contig10151.180.1|Name=mRNA_Ecto-sp13_S_contig10151.180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
MFSTTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRA
GMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVND
AFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALL
VGMNSGISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMH
KRIAPFRTR
back to top