mRNA_Ecto-sp13_S_contig7000.18047.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: D7FZY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY0_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 8.610e-132 Identity = 187/191 (97.91%), Postives = 190/191 (99.48%), Query Frame = 1
Query: 274 MEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELLSATGVGGTGSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
MEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELLSATGVGGTGSS KPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDT+LDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDD+YRLAAVSGDGK+
Sbjct: 1 MEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELLSATGVGGTGSSSKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTILDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDEYRLAAVSGDGKL 191
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A7S2UTZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTZ9_9STRA) HSP 1 Score: 191 bits (486), Expect = 9.200e-58 Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 1
Query: 424 GSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIF-RRGFADEGDHA-PDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
G LQ TGV WS TGSV+ ASFGR+D+ GWCD PG L WNIF RRGF D A P+ V +HSSCLMCV+CHP PAIIAAGSFNGEV+VWDT+ +EPL+A+TKIDD +HREP+ ++WV++ R+++Y++++VSG+GKV
Sbjct: 14 GKKITSLQCTGVGWSATGSVLVASFGRHDLCGWCDIPGVLCAWNIFQRRGF----DPAKPEFVYEHSSCLMCVACHPTKPAIIAAGSFNGEVLVWDTAAEEPLIASTKIDDYFHREPIVKVAWVYDLREEEYQVSSVSGEGKV 152
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A835ZBI6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI6_9STRA) HSP 1 Score: 194 bits (494), Expect = 5.320e-55 Identity = 99/199 (49.75%), Postives = 129/199 (64.82%), Query Frame = 1
Query: 274 MEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELLSATGVGGTGSS----FKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGF-ADEGDH-APDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHN--PRDDDYRLAAVSGDGKV 846
ME L + S AF YAP + + + LH L C+ LL A G S + LQ TGV W+ TGS +AAS+GR ++AGWC+ PGALA WN F+R ADE PD V DHSS LMC+ CHP PAI+AAGSFNGEV+VW+T+ D+PLL ++IDD +HREPVT ++WV++ + + YRL + SGDGK+
Sbjct: 1 MEGLLQSNATSVAFKEYAPAPDEDSSHVKLHAILQCNTEALLRARGQSAMRESSQRGVQSLQCTGVSWNSTGSTLAASYGRLNVAGWCNEPGALACWNAFKRSSSADEAATLTPDVVFDHSSYLMCLCCHPTHPAIVAAGSFNGEVLVWNTAADDPLLGVSQIDDYFHREPVTQVAWVYDMDEQGEGYRLVSTSGDGKI 199
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: W4FF73_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF73_9STRA) HSP 1 Score: 184 bits (468), Expect = 7.480e-51 Identity = 104/280 (37.14%), Postives = 156/280 (55.71%), Query Frame = 1
Query: 16 FQDAHFGAVNFSTNDENKLQMVSQGGQTSEIQVDCCSTQTRISATAETQTE---QDSERKLDPETISGFDDWSDIPPGVARFLERVGGEMEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELLSATGVGGTGSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
FQD H G+ F + K + +++ + STQT ++ +QTE +D P+ +S V FL G M E+ S+ S AF+ + P ++ D ++ +TL+ D S+ L+ TGV W+ TGSV+A ++GR D +GWC+ L WN+F AD + P VL+ SS LMCV+ HP +PA++AAGSFNGE++VW+TS +EPL+AT+ I D +HREP+T L+WV++ +Y +A+VSGDGKV
Sbjct: 4 FQDCHAGSCTFRSKASVKKATSNASTDAVQVEFESASTQTAVAVDNGSQTEYISRDCSTTHPPDEVSS---------AVQAFLNSAGNRMLREMKHSNQSSAFLDFEPEQDADDKHVSKVFTLTFDFFTHFKQPIDAKKPSARLKLECTGVSWNATGSVLAVAYGRFDHSGWCNYRSVLCLWNLFS---ADFNANKPTLVLETSSGLMCVAHHPTNPAMVAAGSFNGELMVWNTSLEEPLVATSGIGDYFHREPITKLAWVYDTPSREYHIASVSGDGKV 271
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A7S1CG11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG11_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.060e-49 Identity = 107/247 (43.32%), Postives = 145/247 (58.70%), Query Frame = 1
Query: 124 STQTRISATAETQTE--QDSERKLDPETISGFDDWSDIPPGVARFLERVGGEMEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELLSATGVG----GTGSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
S QT + + ETQTE + E K +I G+ +D VA FLERV M+ +L+++ AS AF Y + D++ + + LS + A G GT L TGV WS TGSVV ASFG D +GWC + TWN+F +G PD +LD SC+MCV+CHP P+++AAG+FNGEVVVWDT+ EPL+A ++IDD +HREPVT + W+++ Y LA+VS DGKV
Sbjct: 49 SAQTLVPQSIETQTEPLEADEGKEADLSIDGWRPDAD----VAEFLERVAPIMDMQLSRNAASHAFDDYDALAATEDDDPEVVHVLSTTFLQPADAVEGGEAKEGTEDVEVTLPCTGVSWSSTGSVVCASFGFQDHSGWCTHRAGVGTWNVFGKGLRAG---TPDVLLDTMSCVMCVACHPERPSVVAAGTFNGEVVVWDTNEAEPLVAQSRIDDYFHREPVTRVEWLYDMFARAYMLASVSADGKV 288
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A067CJD9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJD9_SAPPC) HSP 1 Score: 178 bits (452), Expect = 1.760e-48 Identity = 117/283 (41.34%), Postives = 157/283 (55.48%), Query Frame = 1
Query: 16 FQDAHFGAVNFSTNDENKLQMVSQGGQTSEIQVDCCSTQTRISATAETQTE--QDSERKLDPETISGFDDWSDIPPGVARFLERVGGEMEDELAKSDASQAFIGYAPIE-EGGDNEIALHYTLSCDLSELLSAT---GVGGTGSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
FQD H G +F + K V +T ++ TQT I+A + QTE + S K+ DD V FL VGG M E+ S S AF ++ E + D ++ +TLS D A G GG S+ + LQ T V W+ TGSV+A ++GR D +GWC+ AL WNIF F P VL+ SS LMCV+ HP PA+IAAGSFNGEV+VW+TS +E L+A++ I D +HREP+ +SWV++P DY +A+VSGDGKV
Sbjct: 3 FQDGHGGGCSFRSKAAVKKVGVDASSETPGVEFVSADTQTAIAADSSCQTEPIESSSTKV------AVDD-----ARVKAFLNDVGGLMLREMQASAKSLAFDDFSVEEADAEDADVTRLFTLSFDFFTHFKAPAEIGAGGRPSTLQ-LQCTAVSWNATGSVLAVAYGRFDHSGWCNYRSALCLWNIFHPDF---NVAKPSLVLETSSGLMCVAHHPTMPAVIAAGSFNGEVLVWNTSLEETLVASSGIGDYFHREPIAKVSWVYDPVARDYNIASVSGDGKV 270
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A1W0AAK0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAK0_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.390e-47 Identity = 111/279 (39.78%), Postives = 154/279 (55.20%), Query Frame = 1
Query: 16 FQDAHFGAVNFSTNDENKLQMVSQGGQTSEIQVDCCSTQTRISATAETQTEQDSERKLDPETISGFDDWSDIPPGVARFLERVGGEMEDELAKSDASQAFIGYAPIE-EGGDNEIALHYTLSCD-LSELLSATGVGGTGSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
F DAH G+ +F + K V+ +T ++ TQT I+A + QTE P I+ + +D V FL+ G M DE+ S S AF + + + DNE +TL+ D + S LQ TGV W+ TGSV+A S+GR D GWC+ AL WNIF F P+ VL+ SS LMCV+ HP PA++AAG+FNGEV+VW+TS +E L+A++ I D +HREP++ LSWV++ DY +A+VSGDGKV
Sbjct: 3 FNDAHGGSCSFRSKAIVKKNGVNASTETPPVEFTSADTQTAIAADSWCQTE--------PIQIAIAKEPAD-ENAVKEFLKSAGRLMLDEMKASMKSLAFDDFIVEDHQVEDNEATKLFTLAFDYFAHFKSPVEGKRDAQETLKLQCTGVSWNATGSVIAVSYGRFDHTGWCNYRSALCLWNIFHHDF---NPSKPNLVLETSSGLMCVAHHPTMPAVVAAGTFNGEVIVWNTSLEENLVASSGIGDYFHREPISKLSWVYDATSRDYNIASVSGDGKV 269
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A024UJE0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJE0_9STRA) HSP 1 Score: 178 bits (452), Expect = 5.450e-47 Identity = 103/278 (37.05%), Postives = 155/278 (55.76%), Query Frame = 1
Query: 16 FQDAHFGAVNFSTNDENKLQMVSQGGQTSEIQVDCCSTQTRISATAETQTEQDSERKLDPETISGFDDWSDIPPGVARFLERVGGEMEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDL-SELLSATGVGGTGSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
FQD H G+ F + K + ++ + +TQT ++ +QTE + ET + D+ + V FL+ G M E+ + + S AF + ++ D ++ +TL+ D + S L+ TGV W+ TGSV+A S+GR D +GWC+ AL WNIF AD P+ VL+ SS LMCV+ HP +PA++AAGSFNGE++VW+TS +EPL+AT+ I D +HREP++ L+WV + +Y +A+VSGDGKV
Sbjct: 3 FQDCHGGSCTFRSKASAKKEAKDASTDAVQVDFEAATTQTSVAVDNGSQTEY-----ISRETTNQSDN---VSAAVHAFLQSTGPIMLREMKQGNQSAAFHDFWQEQDADDKHVSKAFTLAFDFFTHFKQPIDAKKPTQSGLKLECTGVSWNATGSVLAVSYGRFDHSGWCNYRSALCLWNIFS---ADFNPSKPNVVLETSSGLMCVAHHPTNPAVVAAGSFNGELMVWNTSLEEPLVATSGIGDYFHREPISKLAWVFDTPSREYHIASVSGDGKV 269
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A485LGC1_9STRA (Aste57867_20716 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGC1_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.490e-46 Identity = 111/286 (38.81%), Postives = 151/286 (52.80%), Query Frame = 1
Query: 16 FQDAHFGAVNFSTNDENKLQMVSQGGQTSEIQVD--CCSTQTRISATAETQTEQDSERKLDPETISGFDDWSDIPPGVARFLERVGGEMEDELAKSDASQAFIGYAPIEEGGDNEIALHYTLSCDLSELL-------SATGVGGTGSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSLSWVHNPRDDDYRLAAVSGDGKV 846
FQDAH G+ +F + K ++ T +QVD STQT ++ +QTE E G +++ V FL + G M +E+ K F +E + TL+ D +AT S+ LQ TGV W+ TGSV+A S+GR D +GWCD AL WNIF AD P VL+ SS LMCV+ HP +PA++AAGSFNGE+ VW+TS +E L+AT+ I D +HREPVT L+WV + +Y +A+V GDGKV
Sbjct: 3 FQDAHAGSCSFRSKASAKNP--TKDAMTDAVQVDFESISTQTSVAVDNSSQTEF-------IERAGGNQAAAEVTEDVQSFLTKAGARMLEEMNKGGQWAIFNELQQDDESDEKGATKILTLAFDFFSHFKPAATADAATAAVSKQSAGLQLQVTGVSWNATGSVLAVSYGRFDHSGWCDYRSALCLWNIFS---ADLNAAKPHVVLETSSGLMCVAHHPTNPAVVAAGSFNGEIYVWNTSLEETLVATSGIGDYFHREPVTKLAWVFDTPSREYHIASVGGDGKV 276
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Match: A0A1V9YQW6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQW6_9STRA) HSP 1 Score: 171 bits (434), Expect = 7.120e-46 Identity = 108/282 (38.30%), Postives = 159/282 (56.38%), Query Frame = 1
Query: 16 FQDAHFGAVNFSTNDENKLQMVSQGGQTSEIQVDCCSTQTRISATAETQTE-QDSERKLDPETISGFDDWSDIPPGVARFLERVGGEMEDELAKSDASQAFIGYAPIEEGGDN-EIALHYTLSCDLSELLSATGVGGT-GSSFKPLQATGVDWSPTGSVVAASFGRNDIAGWCDSPGALATWNIFRRGFADEGDHAPDTVLDHSSCLMCVSCHPLSPAIIAAGSFNGEVVVWDTSRDEPLLATTKIDDLYHREPVTSL--SWVHNPRDDDYRLAAVSGDGKV 846
F DA+ G +F + K +T ++ +QT I+A + QTE +S+ L + + V RFL VGG M EL + S AF G+A ++ GD ++ +TLS D A G ++ LQ TGV W+ TGSV+A ++GR D +GWC+ AL WNIF AD + P VL+ SS LMCV+ HP PA++AAG+FNGEV+VW+T+ +E L+A++ I D +HREP++ + +WV++ +Y +A+VSGDGKV
Sbjct: 4 FHDAYGGGCSFRSKATVKPVATDASTETPGVEFTSAESQTAIAADSWCQTEPSESKGALAKDAVD--------EDRVKRFLSDVGGLMLQELKAAAKSLAFDGFANEQQDGDEADLTRLHTLSFDFFAHFKAPTEGKEQATTGLKLQCTGVSWNATGSVIAVAYGRFDHSGWCNYRSALCLWNIFH---ADFNPNKPSLVLETSSGLMCVAHHPTMPAVVAAGTFNGEVLVWNTTLEESLVASSAIGDYFHREPISKVWVAWVYDSASREYNIASVSGDGKV 274 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7000.18047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7000.18047.1 >prot_Ecto-sp13_S_contig7000.18047.1 ID=prot_Ecto-sp13_S_contig7000.18047.1|Name=mRNA_Ecto-sp13_S_contig7000.18047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp MAIPEFQDAHFGAVNFSTNDENKLQMVSQGGQTSEIQVDCCSTQTRISATback to top mRNA from alignment at Ecto-sp13_S_contig7000:4043..7813+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7000.18047.1 ID=mRNA_Ecto-sp13_S_contig7000.18047.1|Name=mRNA_Ecto-sp13_S_contig7000.18047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7000:4043..7813+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7000:4043..7813+ >mRNA_Ecto-sp13_S_contig7000.18047.1 ID=mRNA_Ecto-sp13_S_contig7000.18047.1|Name=mRNA_Ecto-sp13_S_contig7000.18047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=846bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7000:4043..7813+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |