prot_Ecto-sp13_S_contig7000.18046.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7000.18046.1
Unique Nameprot_Ecto-sp13_S_contig7000.18046.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length483
Homology
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A6H5KJ10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ10_9PHAE)

HSP 1 Score: 572 bits (1473), Expect = 3.780e-195
Identity = 369/476 (77.52%), Postives = 378/476 (79.41%), Query Frame = 0
Query:    1 MWPPPATDFRPGGSDVTETENKXXXXXXXXXXXXQDYTSSTTEPTGDHVNGGGAKGPTSPPRXXXXXXXXXXXXXXXXGAGDLDPATGATRARRNSEDVVPXXXXXXXXXXXXXXPKVGGDAGGKAYDDDDYDGDQDEGVVIQREGTPTPALANGTERAIKKXXXXXXXXXVVDGNGVGGDGVDTASGNAIELATKEKRNAKEKRRKKSQGADGSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKALSGDKANGTADDGRGATAANSNAGAIRNGSVHEGGEPGHGLGQRKREEGSGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 476
            MWPPPATDFR GGSDVTE +  XXXXXXXXXXXX           GDHVNGG      SPPR       XXXXXXXXX                       XXXXX         PK GGDAGGK YDD         GVVIQREGTPTPALANGTE+A KKXXX      VV GNGVGGDG+DTA+GNAIELA KEKR AKEK +KKSQG D SEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKA+SGDKA+GTADDGRG T A  N GAI NGSVHEGGEPGH LG+RKREEGSGGVGAATAAL +GRVPRKHQEQRRGLPIFAHKADIIRAVK HQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPG ESGEATTAARGSGKKRGRAPSQEDV KGSSS   GGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK
Sbjct:    1 MWPPPATDFRTGGSDVTEAKXXXXXXXXXXXXXXXXXXXXXXX-XGDHVNGGARGARRSPPRLNVKPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXSADGSGEVVPKAGGDAGGKDYDDXXXXXXXXXGVVIQREGTPTPALANGTEKATKKXXXMAVAAAVVGGNGVGGDGLDTAAGNAIELAKKEKRKAKEKHQKKSQGTDDSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKAVSGDKASGTADDGRGDTVAKGNEGAISNGSVHEGGEPGHSLGRRKREEGSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKYHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGWESGEATTAARGSGKKRGRAPSQEDVVKGSSS--GGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 472          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 7.600e-175
Identity = 370/479 (77.24%), Postives = 376/479 (78.50%), Query Frame = 0
Query:    1 MWPPPATDFRPGGSDVTETENKXXXXXXXXXXXXQDYTSSTTEPTGDHVNGGGAKGPTSPPRXXXXXXXXXXXXXXXX---GAGDLDPATGATRARRNSEDVVPXXXXXXXXXXXXXXPKVGGDAGGKAYDDDDYDGDQDEGVVIQREGTPTPALANGTERAIKKXXXXXXXXXVVDGNGVGGDGVDTASGNAIELATKEKRNAKEKRRKKSQGADGSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKALSGDKANGTADDGRGATAANSNAGAIRNGSVHEGGEPGHGLGQRKREEGSGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 476
            MWPPPATDFRPGG DVT     XXXXXXXXXXXX          TGDHVNGG A+GPTSPPR        XXXXXXXX   G  DLD ATGATRA         XXXXXXXXXXXXXX                       GVVIQREG PTPALANGTE     XXXXXXXXX            DTA+GNAIELA KEKR A       SQGAD SEEVEPSGIPFALPMPGARATPSI PTGRSRSASIESAAEFFSTK LSGDKANGT DDGRG TAA SNAGAI NGSVH+G + GHGLG+RKREEGSGGVGAATAAL +GRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSS  G DKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK
Sbjct:    1 MWPPPATDFRPGGGDVTGAXXXXXXXXXXXXXXXXXXXXXXAS-TGDHVNGG-ARGPTSPPRPNAKPSPEXXXXXXXXXXXGVDDLDSATGATRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXGVVIQREGNPTPALANGTEXXXXXXXXXXXXXXXXXXXXXXXXXKDTAAGNAIELAKKEKRKAXXXXXXXSQGADDSEEVEPSGIPFALPMPGARATPSINPTGRSRSASIESAAEFFSTKGLSGDKANGTIDDGRGDTAAKSNAGAISNGSVHQGADSGHGLGRRKREEGSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSS--GPDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 472          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A835ZD99_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD99_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.800e-25
Identity = 76/178 (42.70%), Postives = 96/178 (53.93%), Query Frame = 0
Query:  303 QRKREEG-----SGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTS 475
            +R+R EG     + G+     A    R+PR+HQE RR LP+F H+ +I+ AVK H+TVV+VGETGSGKSTQIPQ+LY+AG+          G SG  T + R                                   I CTQPRRVAA+TVAKRVA E+G        Y+VRFDD+TS
Sbjct:    2 KRRRAEGDADAVANGLRHTKKARPSPRLPRQHQEVRRQLPVFQHRDNIVTAVKTHRTVVLVGETGSGKSTQIPQYLYDAGLAS-----KHKGSSGNGTLSPR----------------------------------TICCTQPRRVAAITVAKRVAEEMGSELGHTCGYSVRFDDQTS 140          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A3P7I8F4_STRVU (Helicase ATP-binding domain-containing protein n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7I8F4_STRVU)

HSP 1 Score: 99.0 bits (245), Expect = 2.050e-20
Identity = 58/151 (38.41%), Postives = 77/151 (50.99%), Query Frame = 0
Query:  330 QEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 480
            +E RR LP++A +   I AVK+HQ +++ GETGSGK+TQ+PQ+LYEAG  +                     GKK                              I CTQPRRVAA++VA RVA EVGC       Y++RF+D TS++ VL
Sbjct:   55 EETRRSLPVYAFREQFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCK--------------------DGKK------------------------------IGCTQPRRVAAMSVAARVAEEVGCKLGMQVGYSIRFEDCTSEKTVL 155          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A7J7C7L0_TRIWF (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C7L0_TRIWF)

HSP 1 Score: 104 bits (259), Expect = 2.920e-20
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 0
Query:  328 KHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 480
            KHQE+R+ LPI+A++ ++++AV DHQ +V+VGETGSGK+TQIPQ+L+EAG T                        KRG+                           +ACTQPRRVAA++VA RV+ E+G        Y++RF+D TS + +L
Sbjct:   69 KHQEERKTLPIYAYRDELLQAVNDHQVIVIVGETGSGKTTQIPQYLHEAGYT------------------------KRGK---------------------------VACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTIL 170          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: K8YVU8_NANGC (Deah (Asp-glu-ala-his) box polypeptide 35 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVU8_NANGC)

HSP 1 Score: 104 bits (260), Expect = 3.940e-20
Identity = 65/154 (42.21%), Postives = 82/154 (53.25%), Query Frame = 0
Query:  327 RKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 480
            R+HQ  R+ LPI+  K  ++  V+ H +VV+VGETGSGKSTQ+PQFL +AG     AG +                + +G  PS     K                 LIACTQPRRVAA+TVA RVA E+GC       Y VRFDD+T  R V+
Sbjct:   23 RQHQNARQQLPIWRQKTYVVETVRRHASVVLVGETGSGKSTQVPQFLLDAGFC---AGIV----------------EAQGSTPSPIRARK-----------------LIACTQPRRVAAITVAGRVAEEMGCALGQAVGYAVRFDDKTGPRTVI 140          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A2A9PNS4_9HYPO (Uncharacterized protein n=1 Tax=Ophiocordyceps unilateralis TaxID=268505 RepID=A0A2A9PNS4_9HYPO)

HSP 1 Score: 104 bits (260), Expect = 5.150e-20
Identity = 59/151 (39.07%), Postives = 80/151 (52.98%), Query Frame = 0
Query:  330 QEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 480
            QEQRR LP+FA ++ +I+A+KD+Q ++VVGETGSGK+TQ+ Q+L EAG                                                     +GG+I CTQPRRVAA++VAKRVA EVGC       YT+RF+D TS + ++
Sbjct:  525 QEQRRQLPVFAFRSQLIQAIKDNQILIVVGETGSGKTTQLTQYLAEAGFAS--------------------------------------------------KGGIIGCTQPRRVAAMSVAKRVAEEVGCKTGQQVGYTIRFEDCTSPKTII 625          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: UPI002009CA34 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009CA34)

HSP 1 Score: 102 bits (254), Expect = 8.810e-20
Identity = 60/151 (39.74%), Postives = 78/151 (51.66%), Query Frame = 0
Query:  330 QEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 480
            + +R+ LPI+A+K  +++AV DHQ +V+VGETGSGK+TQIPQFL EAG TR                                                    G+I CTQPRRVAA++VA RVA E G        Y++RF+DRTSK+ VL
Sbjct:  201 ESERKSLPIYAYKEQLMKAVHDHQVLVIVGETGSGKTTQIPQFLDEAGYTR---------------------------------------------------RGMIGCTQPRRVAAMSVAARVAREKGVKLGHEVGYSIRFEDRTSKKTVL 300          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A4S8KFT4_MUSBA (RNA helicase n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8KFT4_MUSBA)

HSP 1 Score: 103 bits (256), Expect = 1.470e-19
Identity = 61/156 (39.10%), Postives = 94/156 (60.26%), Query Frame = 0
Query:  325 VPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 480
            V  K QE+R+ LPI+ ++  +++AV+DHQ +V+VGETGSGK+TQIPQ+L+EAG T+ G G+        A   A  +    GR   +  + + +            Q  L+ CTQPRRVAA++VA RV+ E+G        Y++RF+D TS++ ++
Sbjct:  257 VLHKLQEERKTLPIYPYREQLLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGQGFGHASTPTAACILASNAALVLGRKALEWRLLEMNIE---------CQLFLVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTIM 403          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: E1ZKD5_CHLVA (RNA helicase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZKD5_CHLVA)

HSP 1 Score: 102 bits (254), Expect = 2.200e-19
Identity = 63/163 (38.65%), Postives = 82/163 (50.31%), Query Frame = 0
Query:  310 SGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDD 472
            +GG GAA       R+     EQRR LPI+AH+ +++  V+ H T VVVGETGSGK+TQ+PQ+L+EAG T+GG                                                   L+ACTQPRRVAA+TVA RVA E+GC       Y++RF+D
Sbjct:   25 AGGAGAAPVFNKNERLA--ISEQRRRLPIYAHRTELLYLVEGHATTVVVGETGSGKTTQVPQYLHEAGWTQGGK--------------------------------------------------LVACTQPRRVAAMTVASRVAEEMGCRLGQDVGYSIRFED 135          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ10_9PHAE3.780e-19577.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZX9_ECTSI7.600e-17577.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZD99_9STRA1.800e-2542.70P-loop containing nucleoside triphosphate hydrolas... [more]
A0A3P7I8F4_STRVU2.050e-2038.41Helicase ATP-binding domain-containing protein n=1... [more]
A0A7J7C7L0_TRIWF2.920e-2038.56Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
K8YVU8_NANGC3.940e-2042.21Deah (Asp-glu-ala-his) box polypeptide 35 n=3 Tax=... [more]
A0A2A9PNS4_9HYPO5.150e-2039.07Uncharacterized protein n=1 Tax=Ophiocordyceps uni... [more]
UPI002009CA348.810e-2039.74pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A4S8KFT4_MUSBA1.470e-1939.10RNA helicase n=1 Tax=Musa balbisiana TaxID=52838 R... [more]
E1ZKD5_CHLVA2.200e-1938.65RNA helicase n=1 Tax=Chlorella variabilis TaxID=55... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 428..477
coord: 279..380
NoneNo IPR availablePANTHERPTHR18934:SF85ATP-DEPENDENT RNA HELICASE DHX8coord: 428..477
coord: 279..380
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 328..478

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7000contigEcto-sp13_S_contig7000:50..3765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7000.18046.1mRNA_Ecto-sp13_S_contig7000.18046.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7000 50..3765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7000.18046.1 ID=prot_Ecto-sp13_S_contig7000.18046.1|Name=mRNA_Ecto-sp13_S_contig7000.18046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp
MWPPPATDFRPGGSDVTETENKRKRKKKKRRSSSQDYTSSTTEPTGDHVN
GGGAKGPTSPPRPKAKPSPQQQRQQQQRGAGDLDPATGATRARRNSEDVV
PAAGGGSAGGSGGVVPKVGGDAGGKAYDDDDYDGDQDEGVVIQREGTPTP
ALANGTERAIKKKKKEAAAAAVVDGNGVGGDGVDTASGNAIELATKEKRN
AKEKRRKKSQGADGSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIE
SAAEFFSTKALSGDKANGTADDGRGATAANSNAGAIRNGSVHEGGEPGHG
LGQRKREEGSGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVK
DHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARG
SGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAK
RVAAEVGCDLGNTVGYTVRFDDRTSKRWVLIG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase