mRNA_Ecto-sp13_S_contig7000.18046.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7000.18046.1
Unique NamemRNA_Ecto-sp13_S_contig7000.18046.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A6H5KJ10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ10_9PHAE)

HSP 1 Score: 572 bits (1473), Expect = 3.780e-195
Identity = 369/476 (77.52%), Postives = 378/476 (79.41%), Query Frame = 1
Query:    1 MWPPPATDFRPGGSDVTETENKXXXXXXXXXXXXQDYTSSTTEPTGDHVNGGGAKGPTSPPRXXXXXXXXXXXXXXXXGAGDLDPATGATRARRNSEDVVPXXXXXXXXXXXXXXPKVGGDAGGKAYDDDDYDGDQDEGVVIQREGTPTPALANGTERAIKKXXXXXXXXXVVDGNGVGGDGVDTASGNAIELATKEKRNAKEKRRKKSQGADGSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKALSGDKANGTADDGRGATAANSNAGAIRNGSVHEGGEPGHGLGQRKREEGSGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 1428
            MWPPPATDFR GGSDVTE +  XXXXXXXXXXXX           GDHVNGG      SPPR       XXXXXXXXX                       XXXXX         PK GGDAGGK YDD         GVVIQREGTPTPALANGTE+A KKXXX      VV GNGVGGDG+DTA+GNAIELA KEKR AKEK +KKSQG D SEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKA+SGDKA+GTADDGRG T A  N GAI NGSVHEGGEPGH LG+RKREEGSGGVGAATAAL +GRVPRKHQEQRRGLPIFAHKADIIRAVK HQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPG ESGEATTAARGSGKKRGRAPSQEDV KGSSS   GGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK
Sbjct:    1 MWPPPATDFRTGGSDVTEAKXXXXXXXXXXXXXXXXXXXXXXX-XGDHVNGGARGARRSPPRLNVKPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXSADGSGEVVPKAGGDAGGKDYDDXXXXXXXXXGVVIQREGTPTPALANGTEKATKKXXXMAVAAAVVGGNGVGGDGLDTAAGNAIELAKKEKRKAKEKHQKKSQGTDDSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKAVSGDKASGTADDGRGDTVAKGNEGAISNGSVHEGGEPGHSLGRRKREEGSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKYHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGWESGEATTAARGSGKKRGRAPSQEDVVKGSSS--GGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 472          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 7.600e-175
Identity = 370/479 (77.24%), Postives = 376/479 (78.50%), Query Frame = 1
Query:    1 MWPPPATDFRPGGSDVTETENKXXXXXXXXXXXXQDYTSSTTEPTGDHVNGGGAKGPTSPPRXXXXXXXXXXXXXXXX---GAGDLDPATGATRARRNSEDVVPXXXXXXXXXXXXXXPKVGGDAGGKAYDDDDYDGDQDEGVVIQREGTPTPALANGTERAIKKXXXXXXXXXVVDGNGVGGDGVDTASGNAIELATKEKRNAKEKRRKKSQGADGSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFFSTKALSGDKANGTADDGRGATAANSNAGAIRNGSVHEGGEPGHGLGQRKREEGSGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 1428
            MWPPPATDFRPGG DVT     XXXXXXXXXXXX          TGDHVNGG A+GPTSPPR        XXXXXXXX   G  DLD ATGATRA         XXXXXXXXXXXXXX                       GVVIQREG PTPALANGTE     XXXXXXXXX            DTA+GNAIELA KEKR A       SQGAD SEEVEPSGIPFALPMPGARATPSI PTGRSRSASIESAAEFFSTK LSGDKANGT DDGRG TAA SNAGAI NGSVH+G + GHGLG+RKREEGSGGVGAATAAL +GRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSS  G DKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK
Sbjct:    1 MWPPPATDFRPGGGDVTGAXXXXXXXXXXXXXXXXXXXXXXAS-TGDHVNGG-ARGPTSPPRPNAKPSPEXXXXXXXXXXXGVDDLDSATGATRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXGVVIQREGNPTPALANGTEXXXXXXXXXXXXXXXXXXXXXXXXXKDTAAGNAIELAKKEKRKAXXXXXXXSQGADDSEEVEPSGIPFALPMPGARATPSINPTGRSRSASIESAAEFFSTKGLSGDKANGTIDDGRGDTAAKSNAGAISNGSVHQGADSGHGLGRRKREEGSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSS--GPDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSK 472          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A835ZD99_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD99_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.800e-25
Identity = 76/178 (42.70%), Postives = 96/178 (53.93%), Query Frame = 1
Query:  907 QRKREEG-----SGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTS 1425
            +R+R EG     + G+     A    R+PR+HQE RR LP+F H+ +I+ AVK H+TVV+VGETGSGKSTQIPQ+LY+AG+          G SG  T + R                                   I CTQPRRVAA+TVAKRVA E+G        Y+VRFDD+TS
Sbjct:    2 KRRRAEGDADAVANGLRHTKKARPSPRLPRQHQEVRRQLPVFQHRDNIVTAVKTHRTVVLVGETGSGKSTQIPQYLYDAGLAS-----KHKGSSGNGTLSPR----------------------------------TICCTQPRRVAAITVAKRVAEEMGSELGHTCGYSVRFDDQTS 140          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A3P7I8F4_STRVU (Helicase ATP-binding domain-containing protein n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7I8F4_STRVU)

HSP 1 Score: 99.0 bits (245), Expect = 2.050e-20
Identity = 58/151 (38.41%), Postives = 77/151 (50.99%), Query Frame = 1
Query:  988 QEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 1440
            +E RR LP++A +   I AVK+HQ +++ GETGSGK+TQ+PQ+LYEAG  +                     GKK                              I CTQPRRVAA++VA RVA EVGC       Y++RF+D TS++ VL
Sbjct:   55 EETRRSLPVYAFREQFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCK--------------------DGKK------------------------------IGCTQPRRVAAMSVAARVAEEVGCKLGMQVGYSIRFEDCTSEKTVL 155          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A7J7C7L0_TRIWF (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C7L0_TRIWF)

HSP 1 Score: 104 bits (259), Expect = 2.920e-20
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  982 KHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 1440
            KHQE+R+ LPI+A++ ++++AV DHQ +V+VGETGSGK+TQIPQ+L+EAG T                        KRG+                           +ACTQPRRVAA++VA RV+ E+G        Y++RF+D TS + +L
Sbjct:   69 KHQEERKTLPIYAYRDELLQAVNDHQVIVIVGETGSGKTTQIPQYLHEAGYT------------------------KRGK---------------------------VACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTIL 170          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: K8YVU8_NANGC (Deah (Asp-glu-ala-his) box polypeptide 35 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVU8_NANGC)

HSP 1 Score: 104 bits (260), Expect = 3.940e-20
Identity = 65/154 (42.21%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  979 RKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 1440
            R+HQ  R+ LPI+  K  ++  V+ H +VV+VGETGSGKSTQ+PQFL +AG     AG +                + +G  PS     K                 LIACTQPRRVAA+TVA RVA E+GC       Y VRFDD+T  R V+
Sbjct:   23 RQHQNARQQLPIWRQKTYVVETVRRHASVVLVGETGSGKSTQVPQFLLDAGFC---AGIV----------------EAQGSTPSPIRARK-----------------LIACTQPRRVAAITVAGRVAEEMGCALGQAVGYAVRFDDKTGPRTVI 140          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A2A9PNS4_9HYPO (Uncharacterized protein n=1 Tax=Ophiocordyceps unilateralis TaxID=268505 RepID=A0A2A9PNS4_9HYPO)

HSP 1 Score: 104 bits (260), Expect = 5.150e-20
Identity = 59/151 (39.07%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  988 QEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 1440
            QEQRR LP+FA ++ +I+A+KD+Q ++VVGETGSGK+TQ+ Q+L EAG                                                     +GG+I CTQPRRVAA++VAKRVA EVGC       YT+RF+D TS + ++
Sbjct:  525 QEQRRQLPVFAFRSQLIQAIKDNQILIVVGETGSGKTTQLTQYLAEAGFAS--------------------------------------------------KGGIIGCTQPRRVAAMSVAKRVAEEVGCKTGQQVGYTIRFEDCTSPKTII 625          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: UPI002009CA34 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009CA34)

HSP 1 Score: 102 bits (254), Expect = 8.810e-20
Identity = 60/151 (39.74%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  988 QEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 1440
            + +R+ LPI+A+K  +++AV DHQ +V+VGETGSGK+TQIPQFL EAG TR                                                    G+I CTQPRRVAA++VA RVA E G        Y++RF+DRTSK+ VL
Sbjct:  201 ESERKSLPIYAYKEQLMKAVHDHQVLVIVGETGSGKTTQIPQFLDEAGYTR---------------------------------------------------RGMIGCTQPRRVAAMSVAARVAREKGVKLGHEVGYSIRFEDRTSKKTVL 300          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: A0A4S8KFT4_MUSBA (RNA helicase n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8KFT4_MUSBA)

HSP 1 Score: 103 bits (256), Expect = 1.470e-19
Identity = 61/156 (39.10%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  973 VPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKRWVL 1440
            V  K QE+R+ LPI+ ++  +++AV+DHQ +V+VGETGSGK+TQIPQ+L+EAG T+ G G+        A   A  +    GR   +  + + +            Q  L+ CTQPRRVAA++VA RV+ E+G        Y++RF+D TS++ ++
Sbjct:  257 VLHKLQEERKTLPIYPYREQLLQAVQDHQVLVIVGETGSGKTTQIPQYLHEAGYTKRGQGFGHASTPTAACILASNAALVLGRKALEWRLLEMNIE---------CQLFLVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTIM 403          
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Match: E1ZKD5_CHLVA (RNA helicase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZKD5_CHLVA)

HSP 1 Score: 102 bits (254), Expect = 2.200e-19
Identity = 63/163 (38.65%), Postives = 82/163 (50.31%), Query Frame = 1
Query:  928 SGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDD 1416
            +GG GAA       R+     EQRR LPI+AH+ +++  V+ H T VVVGETGSGK+TQ+PQ+L+EAG T+GG                                                   L+ACTQPRRVAA+TVA RVA E+GC       Y++RF+D
Sbjct:   25 AGGAGAAPVFNKNERLA--ISEQRRRLPIYAHRTELLYLVEGHATTVVVGETGSGKTTQVPQYLHEAGWTQGGK--------------------------------------------------LVACTQPRRVAAMTVASRVAEEMGCRLGQDVGYSIRFED 135          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7000.18046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ10_9PHAE3.780e-19577.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZX9_ECTSI7.600e-17577.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZD99_9STRA1.800e-2542.70P-loop containing nucleoside triphosphate hydrolas... [more]
A0A3P7I8F4_STRVU2.050e-2038.41Helicase ATP-binding domain-containing protein n=1... [more]
A0A7J7C7L0_TRIWF2.920e-2038.56Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
K8YVU8_NANGC3.940e-2042.21Deah (Asp-glu-ala-his) box polypeptide 35 n=3 Tax=... [more]
A0A2A9PNS4_9HYPO5.150e-2039.07Uncharacterized protein n=1 Tax=Ophiocordyceps uni... [more]
UPI002009CA348.810e-2039.74pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A4S8KFT4_MUSBA1.470e-1939.10RNA helicase n=1 Tax=Musa balbisiana TaxID=52838 R... [more]
E1ZKD5_CHLVA2.200e-1938.65RNA helicase n=1 Tax=Chlorella variabilis TaxID=55... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7000contigEcto-sp13_S_contig7000:50..3765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score534.3
Seed ortholog evalue6e-149
Seed eggNOG ortholog2880.D7FZX9
Model size1449
KEGG koko:K12818,ko:K13117
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.helicase activity
EggNOG OGsCOG1643@1,KOG0922@2759
EC3.6.4.13
Cds size1449
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463961.3971238-CDS-Ecto-sp13_S_contig7000:49..3231681463961.3971238-CDS-Ecto-sp13_S_contig7000:49..323Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7000 50..323 -
1681463961.4094205-CDS-Ecto-sp13_S_contig7000:1192..13081681463961.4094205-CDS-Ecto-sp13_S_contig7000:1192..1308Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7000 1193..1308 -
1681463961.4192579-CDS-Ecto-sp13_S_contig7000:2150..25181681463961.4192579-CDS-Ecto-sp13_S_contig7000:2150..2518Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7000 2151..2518 -
1681463961.439595-CDS-Ecto-sp13_S_contig7000:3074..37651681463961.439595-CDS-Ecto-sp13_S_contig7000:3074..3765Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7000 3075..3765 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7000.18046.1prot_Ecto-sp13_S_contig7000.18046.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7000 50..3765 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7000.18046.1

>prot_Ecto-sp13_S_contig7000.18046.1 ID=prot_Ecto-sp13_S_contig7000.18046.1|Name=mRNA_Ecto-sp13_S_contig7000.18046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp
MWPPPATDFRPGGSDVTETENKRKRKKKKRRSSSQDYTSSTTEPTGDHVN
GGGAKGPTSPPRPKAKPSPQQQRQQQQRGAGDLDPATGATRARRNSEDVV
PAAGGGSAGGSGGVVPKVGGDAGGKAYDDDDYDGDQDEGVVIQREGTPTP
ALANGTERAIKKKKKEAAAAAVVDGNGVGGDGVDTASGNAIELATKEKRN
AKEKRRKKSQGADGSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIE
SAAEFFSTKALSGDKANGTADDGRGATAANSNAGAIRNGSVHEGGEPGHG
LGQRKREEGSGGVGAATAALSKGRVPRKHQEQRRGLPIFAHKADIIRAVK
DHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARG
SGKKRGRAPSQEDVFKGSSSSSNGGDKRGFQGGLIACTQPRRVAAVTVAK
RVAAEVGCDLGNTVGYTVRFDDRTSKRWVLIG*
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mRNA from alignment at Ecto-sp13_S_contig7000:50..3765-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7000.18046.1 ID=mRNA_Ecto-sp13_S_contig7000.18046.1|Name=mRNA_Ecto-sp13_S_contig7000.18046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3716bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7000:50..3765- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGCCTCCGCCAGCCACTGACTTCCGCCCTGGTGGCAGCGATGTGAC GGAAACGGAAAATAAGAGGAAGAGAAAGAAGAAGAAGAGGCGGTCGTCGT CGCAAGACTATACCAGCTCTACGACGGAGCCCACCGGAGATCATGTCAAC GGCGGTGGCGCCAAGGGGCCAACAAGCCCGCCCCGACCTAAAGCTAAGCC TTCGCCACAACAACAACGACAACAACAACAAAGAGGCGCCGGTGATCTCG ACCCCGCCACTGGCGCTACTCGTGCCCGGAGAAACAGCGAGGACGTCGTT CCTGCCGCTGGTGGTGGTAGCGCCGGTGGTTCGGGCGGGGTGGTACCGAA GGTCGGCGGGGATGCCGGCGGCAAGGCTTACGACGACGACGACTACGACG GCGACCAAGACGAGGGAGTCGTGATTCAGCGCGAGGGAACCCCCACGCCG GCGCTGGCCAATGGGACAGAAAGGGCCATCAAGAAGAAGAAGAAAGAGGC CGCCGCAGCCGCCGTTGTCGACGGGAACGGTGTTGGTGGCGATGGTGTGG ACACCGCTTCCGGCAACGCGATAGAGCTCGCGACGAAGGAAAAGAGGAAC GCGAAGGAGAAGCGCCGGAAGAAAAGCCAGGGCGCTGATGGCTCGGAAGA GGTGGAACCGTCCGGAATTCCGTTCGCCCTGCCGATGCCAGGTACCAACC TTATTGAGATGGTTGCATGATGTATGATTCCAAACCCCCTTGGAGCCGAT TTTGTCTCGCATTTTCACGGCTCGACTACTCCACGACCAAGAAGAGGATA CACCCACAATCAAATGATACGCTGTCGACAAGACCACGTTGCAGTGCAGT CATTTCCAGCACCGTCGCCGCTTTTTTTAGCTGCGGAGTAGTTGGCCTCT CAATATCGATCAAGGGGGTGTGGTATCTTCAGCAACTTGAGGTATTGTCA TAGACTGCTGTGGCGCCGAGTCACAGTAAATCTAAACACTGTCTGGGCGC CCTGGATAAACGTCTGGTGCATACGATATGTTGCGGCCGTAGGGGCGACA TACATTTACAGGAAGAAAATTCGCATGGGGTCATTTCAGAAACAATTTCT CCATCAAGGTTGGCCGGTTCCTCGTGCAGACCCTCCCGGGACTCGAAATT GATTTGTTGCTGTTGCCCTCTGGTATCGCGCTGTCCTTTGCTAAGCGCCT CTCTGTGTGCCGTGTAAACTCTCGCGTTCTCAACAATACCGGCACAGGTG CTCGTGCCACTCCCTCCATCAAACCCACCGGTCGATCCCGTTCCGCTTCC ATAGAGAGCGCGGCCGAATTCTTCAGCACTAAGGCTCTTTCCGGAGATAA GGCTAACGGCACCGCCGATGATGGTAGGGGTGCTACTGCCGCCAACAGTA ACGCGGGAGCTATTAGGAACGGCAGTGTCCATGAGGGGGGCGAGCCTGGC CATGGCTTGGGGCAACGCAAACGAGAAGAGGGAAGTGGCGGTGTTGGGGC AGCGACTGCGGCCCTGAGCAAGGGGCGAGTGCCTCGAAAGCACCAGGAGC AGAGGCGAGGGCTTCCCATCTTCGCCCACAAGGCGGACATCATTCGCGCG GTCAAGGACCACCAGGTCAGACCTACCCATCAGTTTCGTGTATTTCGGTG CTGTGAAGGAGCACGACGCCATGTGTTATGATTGCAGTGCTATTGCATAC CGCCACCGAGGGTGCCACCGCTGTAGCACGCCCCAAGCTTTGTTGGTACC GCACCGCTGCGACGGCTTGTTGTAGAGGTCCCCGCGAGTAATTGGCGGTG GTCTCGTGGCTAGGGTGTCCGCTGTTGCATCTGTGATGGCACTCGTCTGC TCTGTCTCATTAGCCCAGCCTGTTTCCTGCAGAGCATTGCCGCGCGTTTT TACTCCTAGATTGGCAGCACCAGCACCCCGTTGAGGCACTTGCAGGAGCT CAGCGTCCACACGCTCTGGTGTTGTTCGCGCGGTCCCATCAACCGTAGTC GGTTGTGCCACAAGCGTCGCCACGGCCTTTGTACGCAAGAAGGACGGTCT TGCAAGGTGTAAGGCTACCCGGGAGGGACTCTTCGTGGACCCCCCCCCAC ATAGACAGCGGTACCATGTAGTTGAACCAACAGCGAGCTGGCACGCGGCA ACGTCAGCTCCTGCGGAAACCCCCAAAGTAAAGCGGATGAACTAGGGTAA CAAGGTGTAAGGCTACCCGGGAGGGACTCTTCGTGGACCCCCCCCACATA GACAGCGGTACCATGTAGTTGAACCAACAGCGAGCTGGCACGCAGTAACG CCAGCTCCTGCGGGAACCCCTAACGTAAAGCGGATGAACTAGGGTAACGA CTTTTTTTTTGTTGCTTGCGCCCGAGAGTCGCTTGTAAAATAGGGGCGTT TTGTCTTTCTTGACTGATCCGCTTGCTTGTCTCCCCTTTTTGTCGCTCGA TCGTCAGACCGTCGTTGTGGTCGGAGAAACCGGCAGCGGAAAGTCGACCC AGATCCCGCAGTTCCTCTACGAGGCCGGGATAACGAGAGGGGGTGCCGGC TGGATACCGGGCGGGGAGTCGGGGTAAGTTTAAGCGTCGCCAACGGTTCG CGTATGGCAAGCTTGGACGTGGCGTGTCACACTCTACATTGCCACACTCG ACGGGTACAGTAGTGTTTCTTTCGAATTTCGTTCTGGAACAGCAAAAACG CCTCGGTTGTTTGTGGGTTGGGTGAGTGTGACAGTGCGGCAATATGCTGC AAACACCATCGTGTGATTGTCTTCGTGTGCGCGTGTTTGCCGAAAGAAGG GTGGCCGCAAGTTCTACTGTAGCGTCAGCGTGTCATGGCTGCGCTGCCTT CCCACCGCATGCAGGACAGAGCCTACCGTATGGCTTCGACCGAAAATAGT TTTTTTTTACAGATCGATCTCTCCACGACCAATACAGTGGGGGTCCCTGT TTAGTACCGGTATGTACCCAGAAAATTCACCCGCACTAAACGGGACCGGC ACTATTTAAAGTTCTGACAATGACTTTGAAATTCGGTGTGTGCCCGCCGA AAACACCGGCACTATTAGGAGCATTGGCGCTATTCAGCCGGCACAAAACA GGGACCCTCACTGCTATAGAGGTTTGTTCCGATAGAACCCCCAACCGACA TGTCAAGGATAGAAAGCACTCTCTGGACAACATGCTTTGCCAGCACCACC CGTTGTCGGCTTTGGCATCCAGCATCCTGGTTGCGTAGCAATCGAGCAAT TAAACGACCGTTCGCACGGGTGCGCGTTCGCCCGCGCCTTCGCGGTACAT GCATCTTTCTTCCTTCTCAGCCGTGGGGTCTCCCGATCAATGCATCCCTT CGCCATGCCCCTGTTTCTTCTCACCATTTTCATGCAACACCGCACCCGGG GCCCCGCGATATACATCGCCCCGTTGTGCCACCCCTCTACAGGGAGGCCA CGACAGCGGCAAGAGGGAGCGGCAAGAAGCGAGGGCGGGCTCCCAGCCAG GAGGACGTTTTCAAGGGCAGCAGCAGCAGCAGCAACGGCGGCGACAAACG GGGTTTCCAGGGAGGCCTTATCGCCTGCACGCAGCCGCGAAGGGTGGCGG CGGTTACAGTGGCGAAGCGCGTGGCCGCGGAGGTCGGGTGCGACCTGGGG AACACGGTTGGGTACACCGTTCGTTTCGACGACCGTACTTCGAAGAGGTG GGTTTTGATTGGCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7000:50..3765-

>mRNA_Ecto-sp13_S_contig7000.18046.1 ID=mRNA_Ecto-sp13_S_contig7000.18046.1|Name=mRNA_Ecto-sp13_S_contig7000.18046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7000:50..3765- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGCCTCCGCCAGCCACTGACTTCCGCCCTGGTGGCAGCGATGTGAC
GGAAACGGAAAATAAGAGGAAGAGAAAGAAGAAGAAGAGGCGGTCGTCGT
CGCAAGACTATACCAGCTCTACGACGGAGCCCACCGGAGATCATGTCAAC
GGCGGTGGCGCCAAGGGGCCAACAAGCCCGCCCCGACCTAAAGCTAAGCC
TTCGCCACAACAACAACGACAACAACAACAAAGAGGCGCCGGTGATCTCG
ACCCCGCCACTGGCGCTACTCGTGCCCGGAGAAACAGCGAGGACGTCGTT
CCTGCCGCTGGTGGTGGTAGCGCCGGTGGTTCGGGCGGGGTGGTACCGAA
GGTCGGCGGGGATGCCGGCGGCAAGGCTTACGACGACGACGACTACGACG
GCGACCAAGACGAGGGAGTCGTGATTCAGCGCGAGGGAACCCCCACGCCG
GCGCTGGCCAATGGGACAGAAAGGGCCATCAAGAAGAAGAAGAAAGAGGC
CGCCGCAGCCGCCGTTGTCGACGGGAACGGTGTTGGTGGCGATGGTGTGG
ACACCGCTTCCGGCAACGCGATAGAGCTCGCGACGAAGGAAAAGAGGAAC
GCGAAGGAGAAGCGCCGGAAGAAAAGCCAGGGCGCTGATGGCTCGGAAGA
GGTGGAACCGTCCGGAATTCCGTTCGCCCTGCCGATGCCAGGTGCTCGTG
CCACTCCCTCCATCAAACCCACCGGTCGATCCCGTTCCGCTTCCATAGAG
AGCGCGGCCGAATTCTTCAGCACTAAGGCTCTTTCCGGAGATAAGGCTAA
CGGCACCGCCGATGATGGTAGGGGTGCTACTGCCGCCAACAGTAACGCGG
GAGCTATTAGGAACGGCAGTGTCCATGAGGGGGGCGAGCCTGGCCATGGC
TTGGGGCAACGCAAACGAGAAGAGGGAAGTGGCGGTGTTGGGGCAGCGAC
TGCGGCCCTGAGCAAGGGGCGAGTGCCTCGAAAGCACCAGGAGCAGAGGC
GAGGGCTTCCCATCTTCGCCCACAAGGCGGACATCATTCGCGCGGTCAAG
GACCACCAGACCGTCGTTGTGGTCGGAGAAACCGGCAGCGGAAAGTCGAC
CCAGATCCCGCAGTTCCTCTACGAGGCCGGGATAACGAGAGGGGGTGCCG
GCTGGATACCGGGCGGGGAGTCGGGGGAGGCCACGACAGCGGCAAGAGGG
AGCGGCAAGAAGCGAGGGCGGGCTCCCAGCCAGGAGGACGTTTTCAAGGG
CAGCAGCAGCAGCAGCAACGGCGGCGACAAACGGGGTTTCCAGGGAGGCC
TTATCGCCTGCACGCAGCCGCGAAGGGTGGCGGCGGTTACAGTGGCGAAG
CGCGTGGCCGCGGAGGTCGGGTGCGACCTGGGGAACACGGTTGGGTACAC
CGTTCGTTTCGACGACCGTACTTCGAAGAGGTGGGTTTTGATTGGCTGA
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