prot_Ecto-sp13_S_contig70.18043.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70.18043.1
Unique Nameprot_Ecto-sp13_S_contig70.18043.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length368
Homology
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: D8LKZ6_ECTSI (Endo/excinuclease amino terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ6_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 1.070e-195
Identity = 306/368 (83.15%), Postives = 314/368 (85.33%), Query Frame = 0
Query:    1 LPKANPRKKFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYGKLNLPQPLPVKGDPDTELSTGAQGGLPVYKSPPGSQEERLEARRQNRCALCAESFSGGDGDGPPVWRVDDSSDDXXXXXXXXXGDGHDSDGAGGWSSDAGSTDFISQPYPGEQEXXXXXXXXXXXXXDDDSCWRLSPAHSKGKRAGKGSEGNGQPERFPASGEMPGGVKSPALANGNKHISFVDTTSDRYDSDGSEGGDQMK-ITGQSPPELPLAERLRLRRLTNC 367
            +PKANPRKKFFHCYLLQSQDPKH+RSTYIGFTVDPGRRIRQHNGDI GGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKV DLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASY KLNLPQPLPVKGDPDTELSTGAQ GLPVYKSPPGSQEERLEA+                                XXXXXXX GDGHDSDGAGGWSSDAGSTDFISQPYPGE+ XXXXXXXXXX      SCWRLS      +RAGK SEG+GQPERFPASGEMPGGVKSPALANGNKHISFVDTTSDRYDSDGSE GDQMK ITGQSPP+LPLAERLRLRRL +C
Sbjct:    1 MPKANPRKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGDIIGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVPDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYSKLNLPQPLPVKGDPDTELSTGAQEGLPVYKSPPGSQEERLEAQXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXDGDGHDSDGAGGWSSDAGSTDFISQPYPGEEXXXXXXXXXXX------SCWRLSL-----ERAGKDSEGSGQPERFPASGEMPGGVKSPALANGNKHISFVDTTSDRYDSDGSEEGDQMKKITGQSPPKLPLAERLRLRRLRDC 350          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: A0A836CE53_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE53_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.030e-42
Identity = 78/150 (52.00%), Postives = 94/150 (62.67%), Query Frame = 0
Query:   26 STYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYGKLNLPQP--LPVKGDPDTELSTGAQGGLPVYKS 173
            STYIGFTV P RRIRQHNG+I  GA RT+ KRPW M  +V GFPSKS+ALQFE AWQHP +DR +K KV  L +  R + G+  KL +CKA++CL+PW RYGLG  F   + AA +    LP    L  +   D     G    L VY S
Sbjct:    2 STYIGFTVHPKRRIRQHNGEIKAGARRTRMKRPWQMALVVTGFPSKSAALQFEWAWQHPYKDRHVKGKVGALALKGRGSYGLKAKLAICKALMCLEPWCRYGLGTHFADNDIAAVFRAAALPDSDALQPRALDDAPRCVGPLDALAVYAS 151          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: A0A5J4Y6I9_9CHLO (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y6I9_9CHLO)

HSP 1 Score: 143 bits (361), Expect = 1.070e-36
Identity = 72/138 (52.17%), Postives = 89/138 (64.49%), Query Frame = 0
Query:   10 FFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYGKLNLP 147
            F+ CYLL S DPK++  TYIGFTV+P RR+RQHNG+I  GA RTKR RPWDMV +V+GFP+K  ALQFE AWQHP   + ++   + L   + R  G  GK+RL   ML LDPW  Y L ++ L   YA    K   P
Sbjct:    4 FYGCYLLTSLDPKNKGRTYIGFTVNPRRRLRQHNGEITAGAHRTKRGRPWDMVLVVYGFPTKVQALQFEWAWQHPTASKAVREAAQRLGTIAMR--GAKGKVRLLFEMLSLDPWCYYPLTVQLLSTSYAPLRNKCLQP 139          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: D8QRY0_SELML (GIY-YIG domain-containing protein (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRY0_SELML)

HSP 1 Score: 140 bits (352), Expect = 1.520e-36
Identity = 66/129 (51.16%), Postives = 90/129 (69.77%), Query Frame = 0
Query:   10 FFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYA 138
            F+ CYLL+S +P+ +  TYIGFTV+P RRIRQHNG+I  GAFRTK+KRPW+MV  V+GF SK+ ALQFE AWQHP+  + + +     P + R   G+ GK+++  AMLC   W+R  L ++F   E+A
Sbjct:    1 FYGCYLLRSINPRFKGQTYIGFTVNPRRRIRQHNGEITCGAFRTKKKRPWEMVLCVYGFSSKTDALQFEWAWQHPKLSKEVVLPAEVKPKNLR---GIAGKIKILHAMLCSPKWSRMKLTVQFFSSEHA 126          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: W9RZR0_9ROSA (Structure-specific endonuclease subunit SLX1 homolog n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RZR0_9ROSA)

HSP 1 Score: 142 bits (359), Expect = 1.840e-35
Identity = 80/180 (44.44%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    7 RKKFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAA-SYGKLNLPQPLPVKGDPDTELSTGAQGGLPVYKSP-PGSQEERLEA 184
            RK F+ CYLL S  P+H+  TYIGFTV+P RRIRQHNG+I  GA+RTK++RPW+MV  +HGFPS  SALQFE AWQHP       + VR      +   G+  K++L   ML L  W    + + +   +Y   S G L+LPQ   VK  P  EL    +G   ++++      EER EA
Sbjct:   29 RKGFYACYLLVSLSPRHKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIHGFPSNVSALQFEWAWQHPNES----LAVRKAAASFKSLSGIANKIKLAYTMLTLPSWQSLNITVNYFSTKYTQHSAGCLSLPQHKKVKICPMDELPCYVKGDEGLFENEGEWDNEERDEA 204          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: UPI001F03346F (structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03346F)

HSP 1 Score: 139 bits (350), Expect = 2.240e-35
Identity = 75/187 (40.11%), Postives = 104/187 (55.61%), Query Frame = 0
Query:    9 KFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDIN-GGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYGKLNLPQ-PLPVKGDPDTELSTGAQGGLPVYKSPPGSQEERLEARRQNRCALC 193
            +F+ CYLL S +PK++  TYIGFTVDP RRIRQHNG I  GGA +T ++ PW+M+  +HGFP++ SAL+FE AWQHP + RR+K  V       +    V    R+   ML + PW R  L IR+L++EY   +  L  P   +P+             G +P +K P  +   R E      C +C
Sbjct:    8 RFYGCYLLYSLNPKYKGRTYIGFTVDPNRRIRQHNGGIEKGGAHKTSKRGPWEMILTIHGFPNEISALRFEWAWQHPMKSRRLKHVVEKKKSSEK---SVQFCFRVLTEMLRVGPWNRLPLTIRWLKDEYMMDFDTLKQPPIHMPI-----------VYGSIPSWKKPKSADIAREEELETKTCCIC 180          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: A0A2I0KXX6_PUNGR (GIY-YIG domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0KXX6_PUNGR)

HSP 1 Score: 135 bits (339), Expect = 3.580e-35
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 0
Query:    8 KKFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWAR 125
            ++F+ CYLL S  P+H+  TYIGFTV+P RRIRQHNG++  GA+RTK KRPW+MV  ++GFP+  SALQFE AWQHP    R  V VR+   + +   G+  K++L  AML L PW R
Sbjct:   27 RRFYGCYLLVSLSPRHKGQTYIGFTVNPRRRIRQHNGELRSGAWRTKNKRPWEMVVCIYGFPTNVSALQFEWAWQHP----RESVAVREAAANFKSLSGITNKIKLAYAMLTLPPWQR 140          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: A0A061RKW1_9CHLO (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RKW1_9CHLO)

HSP 1 Score: 139 bits (349), Expect = 3.660e-35
Identity = 77/165 (46.67%), Postives = 97/165 (58.79%), Query Frame = 0
Query:    8 KKFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYGKLNLPQP------LPVKGDPDTELSTGAQG 166
            KKFF CYLL S DPK +  TYIGFTV+P RRIRQHNG I  GA RTK+ RPWDM  +++GFP+K  ALQFE AWQHP     ++    +L    R   GV GK+RL   ML ++P+  Y L ++FL  +Y+A    +  P P       P+   P   L  G  G
Sbjct:    3 KKFFGCYLLASLDPKCKGRTYIGFTVNPRRRIRQHNGQIVNGAHRTKKGRPWDMALVLYGFPTKIHALQFEWAWQHPSTSLAVRDAYNNLT--KRERGGVAGKIRLLIEMLRVEPFCFYQLTLQFLSSKYSAMRAGMPSPPPHVAVEVAPLDDLPGELLDDGVDG 165          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: A0A5E4G6P4_PRUDU (Structure-specific endonuclease subunit SLX1 homolog n=6 Tax=Prunus TaxID=3754 RepID=A0A5E4G6P4_PRUDU)

HSP 1 Score: 137 bits (346), Expect = 4.830e-35
Identity = 69/146 (47.26%), Postives = 92/146 (63.01%), Query Frame = 0
Query:    9 KFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAA-SYGKLNLPQPLPVK 153
            +FF CYLL S+ P+++  TYIGFTV+P RRIRQHNG+I  GA+RTKRKRPW+MV  ++GFP+  SALQFE AWQHP     +   VR      +   G+  K++L   ML L PW    + ++F   +Y   S G   LP+ + VK
Sbjct:   26 RFFACYLLSSRSPRYKGHTYIGFTVNPRRRIRQHNGEIAQGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPT----VSKAVRQAAASFKSPRGLVSKIKLAYTMLTLPPWQSLNITVKFFSTQYTKHSAGCPRLPEQMKVK 167          
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Match: A0A314YTX9_PRUYE (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314YTX9_PRUYE)

HSP 1 Score: 135 bits (341), Expect = 8.900e-35
Identity = 69/146 (47.26%), Postives = 90/146 (61.64%), Query Frame = 0
Query:    9 KFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAA-SYGKLNLPQPLPVK 153
            +FF CYLL S+ P ++  TYIGFTV+P RRIRQHNG+I  GA+RTKRKRPW+MV  ++GFP+  SALQFE AWQHP     +   VR      +   G+  K++L   ML L PW    + + F   +Y   S G   LP+ + VK
Sbjct:   21 RFFACYLLTSRSPSYKGHTYIGFTVNPRRRIRQHNGEIAQGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPT----VSKAVRQAAASFKSLRGLVSKIKLAYTMLTLPPWQSLNITVNFFSTQYTKHSAGCPRLPEQMKVK 162          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70.18043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ6_ECTSI1.070e-19583.15Endo/excinuclease amino terminal domain-containing... [more]
A0A836CE53_9STRA9.030e-4252.00GIY-YIG domain-containing protein n=1 Tax=Tribonem... [more]
A0A5J4Y6I9_9CHLO1.070e-3652.17Structure-specific endonuclease subunit SLX1 homol... [more]
D8QRY0_SELML1.520e-3651.16GIY-YIG domain-containing protein (Fragment) n=5 T... [more]
W9RZR0_9ROSA1.840e-3544.44Structure-specific endonuclease subunit SLX1 homol... [more]
UPI001F03346F2.240e-3540.11structure-specific endonuclease subunit SLX1 homol... [more]
A0A2I0KXX6_PUNGR3.580e-3553.39GIY-YIG domain-containing protein n=1 Tax=Punica g... [more]
A0A061RKW1_9CHLO3.660e-3546.67Structure-specific endonuclease subunit SLX1 homol... [more]
A0A5E4G6P4_PRUDU4.830e-3547.26Structure-specific endonuclease subunit SLX1 homol... [more]
A0A314YTX9_PRUYE8.900e-3547.26Structure-specific endonuclease subunit SLX1 homol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035901GIY-YIG endonuclease superfamilyGENE3D3.40.1440.10coord: 6..103
e-value: 4.7E-16
score: 60.5
IPR000305GIY-YIG endonucleasePFAMPF01541GIY-YIGcoord: 12..87
e-value: 7.8E-15
score: 54.9
IPR000305GIY-YIG endonucleasePROSITEPS50164GIY_YIGcoord: 9..92
score: 19.128
NoneNo IPR availablePANTHERPTHR20208FAMILY NOT NAMEDcoord: 4..275
IPR027520Structure-specific endonuclease subunit Slx1HAMAPMF_03100Endonuc_su_Slx1coord: 6..331
score: 21.79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70contigEcto-sp13_S_contig70:33742..36737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70.18043.1mRNA_Ecto-sp13_S_contig70.18043.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70 33742..36737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70.18043.1 ID=prot_Ecto-sp13_S_contig70.18043.1|Name=mRNA_Ecto-sp13_S_contig70.18043.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=368bp
LPKANPRKKFFHCYLLQSQDPKHRRSTYIGFTVDPGRRIRQHNGDINGGA
FRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRDLPVD
SRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYGKLNLPQPL
PVKGDPDTELSTGAQGGLPVYKSPPGSQEERLEARRQNRCALCAESFSGG
DGDGPPVWRVDDSSDDEEDDEGGDDGDGHDSDGAGGWSSDAGSTDFISQP
YPGEQEEEEEEEEEEEDGTDDDSCWRLSPAHSKGKRAGKGSEGNGQPERF
PASGEMPGGVKSPALANGNKHISFVDTTSDRYDSDGSEGGDQMKITGQSP
PELPLAERLRLRRLTNC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035901GIY-YIG_endonuc_sf
IPR000305GIY-YIG_endonuc
IPR027520Slx1